| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU44375.1 hypothetical protein TSUD_243070 [Trifolium subterraneum] | 3.3e-77 | 43.75 | Show/hide |
Query: EPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV--------------
EPK YK AL + +W+ AM++E+ AL NNTW LVQRP D NV+ SKW+F+TK DG+I+R+KARLVA+GYTQI GL++ ET+SPV
Subjt: EPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV--------------
Query: --------------------------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEII
N + +Y TL+L YVD+II
Subjt: --------------------------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEII
Query: LTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLT
LTGN S I L+ L +F L+ LGQL FL IE+KH GI +SQ KYA ++L ++ MLG + INTPI + P + D P DA EYR + G LQYLT
Subjt: LTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLT
Query: LTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
TRPD+ +AVN VCQH Q P KDL+AVKRILRYI+GTL + + +SLNL AFCDADW GCP T RSTTGFC++L S+CIS
Subjt: LTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| PNY16899.1 copia-like polyprotein, partial [Trifolium pratense] | 2.0e-74 | 43.23 | Show/hide |
Query: EPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV--------------
EPK YK AL + +W++AM+EE+ AL NNTW LV RP D NVV SKW+F+TK DG+I+R+KARLVA+GYTQI GL++ ET+SPV
Subjt: EPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV--------------
Query: --------------------------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEII
N + +Y TL+L YVD+II
Subjt: --------------------------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEII
Query: LTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLT
LTGN S I LI L +F L+ LGQL FL IE+K+ GI +SQ KYA ++L ++ ML + INTPI P D + DA EYR + G LQYLT
Subjt: LTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLT
Query: LTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
TRPD+ +AVN VCQH Q P KDL+AVKRILRYI+GTL + + +SLNL AFCDADW GCP T RSTTGFC++L +CIS
Subjt: LTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| RVW19921.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.5e-74 | 40.6 | Show/hide |
Query: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
++++ D SK + +D+ P QG Q D HM+TRSKL KN DP+L ++ +R S EPK Y+ AL PHW AM+E
Subjt: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
Query: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTNN----------------------------N
E+KAL+ N TW LV RP TN+V SKW+FKTK K DGTI+RYKARLVA+G++QI GL++ ET+SPV +
Subjt: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTNN----------------------------N
Query: QRQIYLTLMLNYVDE------------------------------IILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYARE
+ ++++ +++E + GN+++ I LI TL S+F L+ LG L FL +EVK+ G+ +SQ KY R+
Subjt: QRQIYLTLMLNYVDE------------------------------IILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYARE
Query: ILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNL
+L + M+ INTP+ T D QP D +YR +VG LQYLT TRPDIV+AVN CQH Q P DL+AVKRILRY++GT+++ I +K +SL L
Subjt: ILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNL
Query: YAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
FCDADW GC T RST+G+C+FL +NCIS
Subjt: YAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| RVW43526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 8.1e-76 | 39.66 | Show/hide |
Query: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
++++ D SK + +D+ P QG Q D HM+TRSKL KN DP+L ++ +R S EPK Y+ L PHW AM+E
Subjt: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
Query: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV----------------------------------
E+KAL+ N TW LV RP TN+V SKW+FKTK K DGTI+RYKARLVA+G++QI GL++ ET+SPV
Subjt: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV----------------------------------
Query: ------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEIILTGNNSSHIQQLIGTLRSQF
N R +Y + L+L YVD+II+TGN+++ I LI TL S+F
Subjt: ------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEIILTGNNSSHIQQLIGTLRSQF
Query: CLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQP
L+ LG L FL +EVK+ G+ +SQ KY R++L + M+ INTP+ T D QP D +YR +VG LQYLT TRPDIV+AVN CQH Q P
Subjt: CLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQP
Query: IVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
DL+AVKRILRY++GT+++ I +K +SL L FCDADW GC T RST+G+C+FL +NCIS
Subjt: IVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| RVX04589.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 6.2e-76 | 39.66 | Show/hide |
Query: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
++++ D SK + +D+ P QG Q D HM+TRSKL KN DP+L ++ +R S EPK Y+ L PHW AM+E
Subjt: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
Query: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV----------------------------------
E+KAL+ N TW LV RP TN+V SKW+FKTK K DGTI+RYKARLVA+G++QI GL++ ET+SPV
Subjt: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV----------------------------------
Query: ------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEIILTGNNSSHIQQLIGTLRSQF
N R +Y + L+L YVD+II+TGN+++ I LI TL S+F
Subjt: ------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEIILTGNNSSHIQQLIGTLRSQF
Query: CLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQP
L+ LG L FL +EVK+ G+ +SQ KY R++L + M+ INTP+ T D QP D +YR +VG LQYLT TRPDIV+AVN CQH Q P
Subjt: CLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQP
Query: IVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
DL+AVKRILRY++GT+++ I +K +SL L FCDADW GC T RST+G+C+FL +NCIS
Subjt: IVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3PNP5 Copia-like polyprotein (Fragment) | 9.6e-75 | 43.23 | Show/hide |
Query: EPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV--------------
EPK YK AL + +W++AM+EE+ AL NNTW LV RP D NVV SKW+F+TK DG+I+R+KARLVA+GYTQI GL++ ET+SPV
Subjt: EPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV--------------
Query: --------------------------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEII
N + +Y TL+L YVD+II
Subjt: --------------------------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEII
Query: LTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLT
LTGN S I LI L +F L+ LGQL FL IE+K+ GI +SQ KYA ++L ++ ML + INTPI P D + DA EYR + G LQYLT
Subjt: LTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLT
Query: LTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
TRPD+ +AVN VCQH Q P KDL+AVKRILRYI+GTL + + +SLNL AFCDADW GCP T RSTTGFC++L +CIS
Subjt: LTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| A0A2Z6P7T0 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.6e-77 | 43.75 | Show/hide |
Query: EPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV--------------
EPK YK AL + +W+ AM++E+ AL NNTW LVQRP D NV+ SKW+F+TK DG+I+R+KARLVA+GYTQI GL++ ET+SPV
Subjt: EPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV--------------
Query: --------------------------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEII
N + +Y TL+L YVD+II
Subjt: --------------------------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEII
Query: LTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLT
LTGN S I L+ L +F L+ LGQL FL IE+KH GI +SQ KYA ++L ++ MLG + INTPI + P + D P DA EYR + G LQYLT
Subjt: LTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLT
Query: LTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
TRPD+ +AVN VCQH Q P KDL+AVKRILRYI+GTL + + +SLNL AFCDADW GCP T RSTTGFC++L S+CIS
Subjt: LTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| A0A438C9J9 Retrovirus-related Pol polyprotein from transposon RE1 | 7.4e-75 | 40.6 | Show/hide |
Query: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
++++ D SK + +D+ P QG Q D HM+TRSKL KN DP+L ++ +R S EPK Y+ AL PHW AM+E
Subjt: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
Query: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTNN----------------------------N
E+KAL+ N TW LV RP TN+V SKW+FKTK K DGTI+RYKARLVA+G++QI GL++ ET+SPV +
Subjt: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTNN----------------------------N
Query: QRQIYLTLMLNYVDE------------------------------IILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYARE
+ ++++ +++E + GN+++ I LI TL S+F L+ LG L FL +EVK+ G+ +SQ KY R+
Subjt: QRQIYLTLMLNYVDE------------------------------IILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYARE
Query: ILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNL
+L + M+ INTP+ T D QP D +YR +VG LQYLT TRPDIV+AVN CQH Q P DL+AVKRILRY++GT+++ I +K +SL L
Subjt: ILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNL
Query: YAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
FCDADW GC T RST+G+C+FL +NCIS
Subjt: YAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| A0A438E6Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.9e-76 | 39.66 | Show/hide |
Query: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
++++ D SK + +D+ P QG Q D HM+TRSKL KN DP+L ++ +R S EPK Y+ L PHW AM+E
Subjt: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
Query: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV----------------------------------
E+KAL+ N TW LV RP TN+V SKW+FKTK K DGTI+RYKARLVA+G++QI GL++ ET+SPV
Subjt: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV----------------------------------
Query: ------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEIILTGNNSSHIQQLIGTLRSQF
N R +Y + L+L YVD+II+TGN+++ I LI TL S+F
Subjt: ------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEIILTGNNSSHIQQLIGTLRSQF
Query: CLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQP
L+ LG L FL +EVK+ G+ +SQ KY R++L + M+ INTP+ T D QP D +YR +VG LQYLT TRPDIV+AVN CQH Q P
Subjt: CLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQP
Query: IVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
DL+AVKRILRY++GT+++ I +K +SL L FCDADW GC T RST+G+C+FL +NCIS
Subjt: IVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| A0A438J6K3 Retrovirus-related Pol polyprotein from transposon RE1 | 3.0e-76 | 39.66 | Show/hide |
Query: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
++++ D SK + +D+ P QG Q D HM+TRSKL KN DP+L ++ +R S EPK Y+ L PHW AM+E
Subjt: NNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEE
Query: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV----------------------------------
E+KAL+ N TW LV RP TN+V SKW+FKTK K DGTI+RYKARLVA+G++QI GL++ ET+SPV
Subjt: EMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPV----------------------------------
Query: ------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEIILTGNNSSHIQQLIGTLRSQF
N R +Y + L+L YVD+II+TGN+++ I LI TL S+F
Subjt: ------------------NQTNNNQRQIY---------------------------------------LTLMLNYVDEIILTGNNSSHIQQLIGTLRSQF
Query: CLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQP
L+ LG L FL +EVK+ G+ +SQ KY R++L + M+ INTP+ T D QP D +YR +VG LQYLT TRPDIV+AVN CQH Q P
Subjt: CLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQP
Query: IVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
DL+AVKRILRY++GT+++ I +K +SL L FCDADW GC T RST+G+C+FL +NCIS
Subjt: IVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.5e-28 | 24.73 | Show/hide |
Query: WKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTNN----------------------
W++A+ E+ A +NNTW + +RP++ N+V+S+W+F K G RYKARLVA+G+TQ ++YEET++PV + ++
Subjt: WKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTNN----------------------
Query: ------NQRQIYLTL---------------------------------------------------------------MLNYVDEIILTGNNSSHIQQLI
+ +IY+ L +L YVD++++ + + +
Subjt: ------NQRQIYLTL---------------------------------------------------------------MLNYVDEIILTGNNSSHIQQLI
Query: GTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTL-TRPDIVYAVNC
L +F + L ++ F+ I ++ I LSQ Y ++IL+K M A++TP+ + ++ RS++G L Y+ L TRPD+ AVN
Subjt: GTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRSIVGLLQYLTL-TRPDIVYAVNC
Query: VCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSL--NLYAFCDADWGGCPLTR-STTGF
+ ++ + + + +KR+LRY++GT+D + KN + + + D+DW G + R STTG+
Subjt: VCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSL--NLYAFCDADWGGCPLTR-STTGF
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.7e-24 | 26.06 | Show/hide |
Query: PTLAHEISKLKNSRQQRT-LIAMSHKYEPKNYKMALSFPHWKD---AMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQG
P E ++++ R T + +S EP++ K LS P AM+EEM++L N T+ LV+ P+ ++ KW+FK K GD + RYKARLV +G
Subjt: PTLAHEISKLKNSRQQRT-LIAMSHKYEPKNYKMALSFPHWKD---AMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQG
Query: YTQIEGLNYEETYSPVNQTNNNQ--------------------------------------------------------------RQIYL----------
+ Q +G++++E +SPV + + + RQ Y+
Subjt: YTQIEGLNYEETYSPVNQTNNNQ--------------------------------------------------------------RQIYL----------
Query: --------------------TLMLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLG--QLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAIN
++L YVD++++ G + I +L G L F ++ LG Q L + I + T++ + LSQ KY +L + M ++
Subjt: --------------------TLMLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLG--QLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAIN
Query: TPIMTSPQDTHKDTQPTDAKE--------YRSIVGLLQY-LTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCD
TP + K PT +E Y S VG L Y + TRPDI +AV V + L+ P + +AVK ILRY++GT D + + L + D
Subjt: TPIMTSPQDTHKDTQPTDAKE--------YRSIVGLLQY-LTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCD
Query: ADWGG-CPLTRSTTGFCVFLRSNCIS
AD G +S+TG+ IS
Subjt: ADWGG-CPLTRSTTGFCVFLRSNCIS
|
|
| P92519 Uncharacterized mitochondrial protein AtMg00810 | 5.8e-45 | 45.24 | Show/hide |
Query: MLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRS
+L YVD+I+LTG++++ + LI L S F ++ LG + FL I++K G+ LSQ KYA +IL +GML ++TP+ + + D ++RS
Subjt: MLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRS
Query: IVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCISSLQESRD
IVG LQYLTLTRPDI YAVN VCQ + +P + D +KR+LRY++GT+ + + ++KN+ LN+ AFCD+DW GC T RSTTGFC FL N IS + +
Subjt: IVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCISSLQESRD
Query: ----SSTQTD
SST+T+
Subjt: ----SSTQTD
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.1e-46 | 28.49 | Show/hide |
Query: SPVNQTNNNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPH
SP +++ S ++ I P +A + +++H M TR AK ++ P + ++ ++++ + EP+ AL
Subjt: SPVNQTNNNQLSDISKNLHIDLPTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPH
Query: WKDAMEEEMKALMLNNTWILV-QRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTN---------------------N
W++AM E+ A + N+TW LV P +V +WIF K DG++NRYKARLVA+GY Q GL+Y ET+SPV ++ N
Subjt: WKDAMEEEMKALMLNNTWILV-QRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTN---------------------N
Query: N----------------------------------------------------------------------QRQIYLTLMLNYVDEIILTGNNSSHIQQL
N QR + ML YVD+I++TGN+ + +
Subjt: N----------------------------------------------------------------------QRQIYLTLMLNYVDEIILTGNNSSHIQQL
Query: IGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQ-DTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVN
+ L +F ++ +L FL IE K G+ LSQ +Y ++L ++ M+ + TP+ SP+ + T+ TD EYR IVG LQYL TRPDI YAVN
Subjt: IGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQ-DTHKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVN
Query: CVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLTR-STTGFCVFLRSNCISSLQESRDSSTQTDVGKSLFCVGKKETT
+ Q + P + L+A+KRILRY+ GT ++ I L K N+L+L+A+ DADW G ST G+ V+L + IS + + ++ V +
Subjt: CVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLTR-STTGFCVFLRSNCISSLQESRDSSTQTDVGKSLFCVGKKETT
Query: MQ
MQ
Subjt: MQ
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-46 | 31.71 | Show/hide |
Query: PTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEEEMKALMLNNTWILV-
P L A I + A VN +H M TR+K + P + ++ S NS EP+ A+ W+ AM E+ A + N+TW LV
Subjt: PTLIAGTIPKQGVLAQVNDISSHHMVTRSKLLAKNPVLDPTLAHEISKLKNSRQQRTLIAMSHKYEPKNYKMALSFPHWKDAMEEEMKALMLNNTWILV-
Query: QRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTN---------------------NN---------------------
P +V +WIF K DG++NRYKARLVA+GY Q GL+Y ET+SPV ++ NN
Subjt: QRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQTN---------------------NN---------------------
Query: -------------------------------------------------QRQIYLTLMLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSI
QR + ML YVD+I++TGN++ ++ + L +F ++ L FL I
Subjt: -------------------------------------------------QRQIYLTLMLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSI
Query: EVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDT-HKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILR
E K +G+ LSQ +Y ++L ++ ML + TP+ TSP+ T H T+ D EYR IVG LQYL TRPD+ YAVN + Q++ P A+KR+LR
Subjt: EVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDT-HKDTQPTDAKEYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILR
Query: YIQGTLDYDISLYKNNSLNLYAFCDADWGG-CPLTRSTTGFCVFLRSNCIS
Y+ GT D+ I L K N+L+L+A+ DADW G ST G+ V+L + IS
Subjt: YIQGTLDYDISLYKNNSLNLYAFCDADWGG-CPLTRSTTGFCVFLRSNCIS
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 8.1e-42 | 29.72 | Show/hide |
Query: LIAMSHKYEPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQ----
L+ ++ EP Y A F W AM++E+ A+ +TW + P + + KW++K K DGTI RYKARLVA+GYTQ EG+++ ET+SPV +
Subjt: LIAMSHKYEPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQ----
Query: ------------------------TNNNQRQIYLTL----------------------------------------------------------------
+ +IY+ L
Subjt: ------------------------TNNNQRQIYLTL----------------------------------------------------------------
Query: ---MLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQ-DTHKDTQPTDAK
+L YVD+II+ NN + + +L L+S F L LG L FL +E+ +A GI + Q KYA ++L ++G+LG + P+ S H DAK
Subjt: ---MLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQ-DTHKDTQPTDAK
Query: EYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
YR ++G L YL +TR DI +AVN + Q + P + +AV +IL YI+GT+ + + L F DA + C T RST G+C+FL ++ IS
Subjt: EYRSIVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCIS
|
|
| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 8.7e-12 | 38.04 | Show/hide |
Query: YLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCISSLQES
YLT+TRPD+ +AVN + Q ++AV ++L Y++GT+ + + L L AF D+DW CP T RS TGFC + + +L++S
Subjt: YLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCISSLQES
|
|
| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.2e-46 | 45.24 | Show/hide |
Query: MLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRS
+L YVD+I+LTG++++ + LI L S F ++ LG + FL I++K G+ LSQ KYA +IL +GML ++TP+ + + D ++RS
Subjt: MLNYVDEIILTGNNSSHIQQLIGTLRSQFCLERLGQLTLFLSIEVKHTAKGIMLSQGKYAREILTKSGMLGVAAINTPIMTSPQDTHKDTQPTDAKEYRS
Query: IVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCISSLQESRD
IVG LQYLTLTRPDI YAVN VCQ + +P + D +KR+LRY++GT+ + + ++KN+ LN+ AFCD+DW GC T RSTTGFC FL N IS + +
Subjt: IVGLLQYLTLTRPDIVYAVNCVCQHLQQPIVKDLKAVKRILRYIQGTLDYDISLYKNNSLNLYAFCDADWGGCPLT-RSTTGFCVFLRSNCISSLQESRD
Query: ----SSTQTD
SST+T+
Subjt: ----SSTQTD
|
|
| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.0e-21 | 52.08 | Show/hide |
Query: IAMSHKYEPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQT
I + K EPK+ AL P W AM+EE+ AL N TWILV P + N++ KW+FKTK DGT++R KARLVA+G+ Q EG+ + ETYSPV +T
Subjt: IAMSHKYEPKNYKMALSFPHWKDAMEEEMKALMLNNTWILVQRPQDTNVVESKWIFKTKCKGDGTINRYKARLVAQGYTQIEGLNYEETYSPVNQT
|
|
