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Lag0018106 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018106
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr5:16352373..16352744
RNA-Seq ExpressionLag0018106
SyntenyLag0018106
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]1.0e-2049.09Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + V+EVD +S+I A + ++   L+ + +  +      V   A I+Q AAESCVYCGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCPSD
        EH ++ CPS+
Subjt:  EHNYEFCPSD

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]1.2e-2150.91Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + V+EVD +S+I A + ++   L+ + +  +      V  AAAI+Q AAESCVYCGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCPSD
        EH ++ CPS+
Subjt:  EHNYEFCPSD

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]4.3e-1948.15Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA GA+L+KT+NEA+EILERI++N+CQW+DVR    KK + V+EVD +S+I A + ++   L+ +              AA + Q A ESCVYCGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCP
        EH ++ CP
Subjt:  EHNYEFCP

XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]3.5e-2150Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + V+EVD +S+I A + ++   L+ + +  +      V  AA I+Q AAESCVYCGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCPSD
        EH ++ CPS+
Subjt:  EHNYEFCPSD

XP_023521781.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785639, partial [Cucurbita pepo subsp. pepo]4.3e-1948.18Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + V+EVD +S+I A + ++   L+ + +  +      V  AA I+Q AAESCV CGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCPSD
        EH ++ C S+
Subjt:  EHNYEFCPSD

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333944.9e-2149.09Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + V+EVD +S+I A + ++   L+ + +  +      V   A I+Q AAESCVYCGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCPSD
        EH ++ CPS+
Subjt:  EHNYEFCPSD

A0A6J1EQ90 uncharacterized protein LOC1114364115.8e-2250.91Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA GA+L+KT+NEA+EILERI++N+CQW+DVR    +K + V+EVD +S+I A + ++   L+ + +  +      V  AAAI+Q AAESCVYCGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCPSD
        EH ++ CPS+
Subjt:  EHNYEFCPSD

A0A6J1G7Q6 uncharacterized protein LOC1114515986.6e-1845.45Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA G +L+KT+NEA+EILERI++N+CQW DVR    KK + V+EVD +S+I A + ++   L+ +              A  + Q A ESCVYCGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCPSD
        +H ++ CPS+
Subjt:  EHNYEFCPSD

A0A6J1H7E4 uncharacterized protein LOC1114611682.1e-1948.15Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        +VDASA GA+L+KT+NEA+EILERI++N+CQW+DVR    KK + V+EVD +S+I A + ++   L+ +              AA + Q A ESCVYCGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGY-SKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCP
        EH ++ CP
Subjt:  EHNYEFCP

U5CUI2 Retrotrans_gag domain-containing protein8.4e-1343.64Show/hide
Query:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRG-YSKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE
        ++DASA GA+L+K++NEA EILE I++N+ QWS+ R   S+KV  V+EVD ++ + A + ++   LK ++ + N +    ++ AAAI Q    SCV+CGE
Subjt:  MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRG-YSKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGE

Query:  EHNYEFCPSD
         H +E CPS+
Subjt:  EHNYEFCPSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGATGCTTCTGCAAGAGGGGCCGTTTTGGCAAAAACCTTTAATGAAGCCCATGAGATTTTAGAGAGAATATCAACCAATAGTTGTCAGTGGTCAGATGTTAGAGG
CTATAGTAAAAAAGTGAAGAGTGTAATAGAAGTTGATGGTGTGTCTACCATTAGGGCTGATATAACAGCATTAGTTATCGCTCTTAAAGGCATAACTATGGTAACCAATG
TTCAGCAGCCACCAGTGGTGGAGGCTGCTGCAGCTATAGACCAAGTGGCAGCCGAATCATGTGTCTATTGTGGTGAAGAGCATAATTATGAGTTTTGCCCCAGTGATGCG
TGCTTAAACAACAGTGGACTGAATGTGGATGTTAGGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGATGCTTCTGCAAGAGGGGCCGTTTTGGCAAAAACCTTTAATGAAGCCCATGAGATTTTAGAGAGAATATCAACCAATAGTTGTCAGTGGTCAGATGTTAGAGG
CTATAGTAAAAAAGTGAAGAGTGTAATAGAAGTTGATGGTGTGTCTACCATTAGGGCTGATATAACAGCATTAGTTATCGCTCTTAAAGGCATAACTATGGTAACCAATG
TTCAGCAGCCACCAGTGGTGGAGGCTGCTGCAGCTATAGACCAAGTGGCAGCCGAATCATGTGTCTATTGTGGTGAAGAGCATAATTATGAGTTTTGCCCCAGTGATGCG
TGCTTAAACAACAGTGGACTGAATGTGGATGTTAGGGAATGA
Protein sequenceShow/hide protein sequence
MVDASARGAVLAKTFNEAHEILERISTNSCQWSDVRGYSKKVKSVIEVDGVSTIRADITALVIALKGITMVTNVQQPPVVEAAAAIDQVAAESCVYCGEEHNYEFCPSDA
CLNNSGLNVDVRE