; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018117 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018117
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionserine/arginine-rich splicing factor RS40-like
Genome locationchr5:16714317..16716926
RNA-Seq ExpressionLag0018117
SyntenyLag0018117
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449100.1 PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo]9.2e-17990.24Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP      GGGGGGGGGGSRR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR

Query:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVR-APSHSPPHLSERPNDDRVH
        RKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERS+DHVR APS+ P H  ERPNDDRV 
Subjt:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVR-APSHSPPHLSERPNDDRVH

Query:  SRSRSPYGRER--GSPADGRGTSYSPHDRER-SNPDN----GHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        +RS SPYGRER  GSP DGRGTSYSP DRER SNPDN    GHDQ+ N V EPG+SP+YG TQSPKH+GY+S SPQAEE
Subjt:  SRSRSPYGRER--GSPADGRGTSYSPHDRER-SNPDN----GHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

XP_011650502.1 serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus]1.0e-17789.95Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPY
        SPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSP HSPYRRERERS+DH+RAPSHSPPH  ERPNDDR+ +RS SPY
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPY

Query:  --GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYN-SHSPQAEE
           RERGSP  GRG SYSP DRER NPDNGHD + NTV EPG+ PSY  TQSPKH+GYN S SPQAEE
Subjt:  --GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYN-SHSPQAEE

XP_011650503.1 serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]4.2e-17990.19Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPY
        SPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSP HSPYRRERERS+DH+RAPSHSPPH  ERPNDDR+ +RS SPY
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPY

Query:  --GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
           RERGSP  GRG SYSP DRER NPDNGHD + NTV EPG+ PSY  TQSPKH+GYNS SPQAEE
Subjt:  --GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

XP_022159582.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia]4.4e-18192.64Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP  GGGGGGGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHS-PPHLSERPNDDRVHSRSRSP
        SPYRRERGSPDYG NGI+RSPYRRQRASPDYGSRRSPSPYQR R+  SPDYGRGRSPNHSPYRRERERS+DHVR PSHS PPH  ER NDDRVH+RSRSP
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHS-PPHLSERPNDDRVHSRSRSP

Query:  YGRERGSPADGRGTSYS-PHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        YGRERGSP DGRG SYS P D ERSNPDNGH+QRLNTV EPGDSPSYG TQSP H+GYNS SPQAEE
Subjt:  YGRERGSPADGRGTSYS-PHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

XP_038904888.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida]3.2e-18794.29Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPG--GGGGGGGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPG  GGGGGGGGGSRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPG--GGGGGGGGGSRRSSTN

Query:  TRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRS
        SPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERS+D VRAPSHSPPH  ERPNDDRVH+RS S
Subjt:  SPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRS

Query:  PYGRERGSPADGRGTSYSPHDRER-SNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        PYGRERGSP DGRGTSYSP DRER SNPDNGHDQ+ NTV EPG+SPSYG TQSPKH+GY S SPQAEE
Subjt:  PYGRERGSPADGRGTSYSPHDRER-SNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

TrEMBL top hitse value%identityAlignment
A0A0A0L7I3 Uncharacterized protein4.9e-17889.95Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPY
        SPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSP HSPYRRERERS+DH+RAPSHSPPH  ERPNDDR+ +RS SPY
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPY

Query:  --GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYN-SHSPQAEE
           RERGSP  GRG SYSP DRER NPDNGHD + NTV EPG+ PSY  TQSPKH+GYN S SPQAEE
Subjt:  --GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYN-SHSPQAEE

A0A1S4DXA1 serine/arginine-rich splicing factor RS40-like isoform X14.5e-17990.24Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP      GGGGGGGGGGSRR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR

Query:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVR-APSHSPPHLSERPNDDRVH
        RKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERS+DHVR APS+ P H  ERPNDDRV 
Subjt:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVR-APSHSPPHLSERPNDDRVH

Query:  SRSRSPYGRER--GSPADGRGTSYSPHDRER-SNPDN----GHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        +RS SPYGRER  GSP DGRGTSYSP DRER SNPDN    GHDQ+ N V EPG+SP+YG TQSPKH+GY+S SPQAEE
Subjt:  SRSRSPYGRER--GSPADGRGTSYSPHDRER-SNPDN----GHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

A0A5A7VJB8 Serine/arginine-rich splicing factor RS40-like isoform X14.5e-17990.24Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP      GGGGGGGGGGSRR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR

Query:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVR-APSHSPPHLSERPNDDRVH
        RKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERS+DHVR APS+ P H  ERPNDDRV 
Subjt:  RKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVR-APSHSPPHLSERPNDDRVH

Query:  SRSRSPYGRER--GSPADGRGTSYSPHDRER-SNPDN----GHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        +RS SPYGRER  GSP DGRGTSYSP DRER SNPDN    GHDQ+ N V EPG+SP+YG TQSPKH+GY+S SPQAEE
Subjt:  SRSRSPYGRER--GSPADGRGTSYSPHDRER-SNPDN----GHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

A0A6J1E078 serine/arginine-rich splicing factor RS40-like isoform X12.1e-18192.64Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP  GGGGGGGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHS-PPHLSERPNDDRVHSRSRSP
        SPYRRERGSPDYG NGI+RSPYRRQRASPDYGSRRSPSPYQR R+  SPDYGRGRSPNHSPYRRERERS+DHVR PSHS PPH  ER NDDRVH+RSRSP
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHS-PPHLSERPNDDRVHSRSRSP

Query:  YGRERGSPADGRGTSYS-PHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        YGRERGSP DGRG SYS P D ERSNPDNGH+QRLNTV EPGDSPSYG TQSP H+GYNS SPQAEE
Subjt:  YGRERGSPADGRGTSYS-PHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

A0A6J1HPZ2 serine/arginine-rich splicing factor RS40-like isoform X11.4e-17783.33Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQ+DATRALELTNMSKLMDRVISVEYAVRDDDEKRNG+SPDRNRDRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQ--RERERGSPDY------------------------------------------GRGRS
        SPYR+ERGSPDYG NGIS SPYRRQRASPDYGSRRSPSPYQ  RERERGSPDY                                          GRGRS
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQ--RERERGSPDY------------------------------------------GRGRS

Query:  PNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPYGRERGSP-ADGRGTSYSPHDRERSNPDNGHDQRLNTV---GEPGDSPSY-GRTQSP
        PN SPYRRERERS+DH RAPSHSPPH  ERPNDDRV  RSRSPYGRERGSP  DGRG+SYSP DRERSNPDNGHDQRLNTV    EPGDSPSY G TQSP
Subjt:  PNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPYGRERGSP-ADGRGTSYSPHDRERSNPDNGHDQRLNTV---GEPGDSPSY-GRTQSP

Query:  KHQGYNSHSPQAEE
        KH+GY+S SPQAEE
Subjt:  KHQGYNSHSPQAEE

SwissProt top hitse value%identityAlignment
O22315 Serine/arginine-rich-splicing factor SR342.6e-1429.94Show/hide
Query:  KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEW-------TKQERGIRRPGGGGGGGG
        + ++ GN   D R+ ++E LFS+YG V ++D+K      G+AF+  +D RDAEDAI   D  +F   G RLRVE        +   RG    GG GGG G
Subjt:  KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEW-------TKQERGIRRPGGGGGGGG

Query:  GGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRN----FAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP
         G   S   +R S+   ++   P     +DL+ H    G +   ++ R+       V Y   ED   AL+  + ++  +   +    VR+ D +++  SP
Subjt:  GGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRN----FAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP

Query:  DRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSP-YRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLS
         R R  S  R R       R R      +   SRSP  +  R SP   + RSP P  + R   SP   R RS + SP    ++  +     PS       
Subjt:  DRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSP-YRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLS

Query:  ERPNDDRVHSRSRS
          P    +H+RS S
Subjt:  ERPNDDRVHSRSRS

P92964 Serine/arginine-rich splicing factor RS312.5e-7053.64Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDERDAEDAIR LD   FG + RRL VEW K ERG  R          G  ++ +N +
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        P+KTLFVINFDP  T+  D+E+HF+PYGK+ +VRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+      DRN  RSP   RRS 
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPY
        SP  R R SPDYG      SP + +R SPDYG  RSP   + +R +G   Y R RSP++        RS+D+ R  S         P  DR  SRS  P 
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPY

Query:  GR
        GR
Subjt:  GR

P92965 Serine/arginine-rich splicing factor RS402.8e-10961.52Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER      GG    GGGSRRSS++ R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVH-SRSRSP
        SPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++ R RGSP+YGR R  N SP RRER            SP   S  PN+ R   S + SP
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVH-SRSRSP

Query:  YGRERGSPADGRGTSYSP---HDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        + +E  SP +G G   SP    +R RS+P+NG  +   ++G       Y   +SP  +  +  SP A+E
Subjt:  YGRERGSPADGRGTSYSP---HDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

P92966 Serine/arginine-rich splicing factor RS411.1e-10061.29Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +R       GG G  GGSRRSS+  R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPNHSPYR-RERERSTDHVRAPSHSPPHLSERPNDDRVHSR
        SPYRRERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+R R   SPDY    R R    SP     R RS    R  S SPP     P + R  SR
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPNHSPYR-RERERSTDHVRAPSHSPPHLSERPNDDRVHSR

Query:  SRSPY--GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        S  PY   RE  SP            R +S+P+NG  +    + E      Y    SP  +   S SP AEE
Subjt:  SRSPY--GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

Q9ZPX8 Serine/arginine-rich splicing factor RS31A7.9e-6449.02Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-RPGGGGGGGGGGSRRSSTNT
        M+ ++ GNF+YD R  DLERLFS++G+V RVDMKSG+AF+Y EDERDAEDAIR  D   FG   R+L VEW K  +G R +P  G         ++ +N 
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-RPGGGGGGGGGGSRRSSTNT

Query:  RPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRS
        RP+KTLFVINFDP  TR RD+ERHF+PYGK+L+VR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+ + Y        +  R+RRS
Subjt:  RPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRS

Query:  PSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSP
        PSP  R R SPDY            +R SP+Y   + P+PY+R   R SPDYGR              RS+D+ RA + SP            + RSRSP
Subjt:  PSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSP

Query:  YGRERG
          R RG
Subjt:  YGRERG

Arabidopsis top hitse value%identityAlignment
AT4G25500.1 arginine/serine-rich splicing factor 352.0e-11061.52Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER      GG    GGGSRRSS++ R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVH-SRSRSP
        SPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++ R RGSP+YGR R  N SP RRER            SP   S  PN+ R   S + SP
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVH-SRSRSP

Query:  YGRERGSPADGRGTSYSP---HDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        + +E  SP +G G   SP    +R RS+P+NG  +   ++G       Y   +SP  +  +  SP A+E
Subjt:  YGRERGSPADGRGTSYSP---HDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

AT4G25500.3 arginine/serine-rich splicing factor 352.7e-9159.58Show/hide
Query:  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRI
        GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER      GG    GGGSRRSS++ RPSKTLFVINFD  +TRTRDLE+HF+PYGKI++VRI
Subjt:  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRI

Query:  RRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRR
        RRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG      + YR++R SPDYG RR
Subjt:  RRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRR

Query:  SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVH-SRSRSPYGRERGSPADGRGTSYSP---HDRERSNPDNGHDQ
        SPSPY++ R RGSP+YGR R  N SP RRER            SP   S  PN+ R   S + SP+ +E  SP +G G   SP    +R RS+P+NG  +
Subjt:  SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVH-SRSRSPYGRERGSPADGRGTSYSP---HDRERSNPDNGHDQ

Query:  RLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
           ++G       Y   +SP  +  +  SP A+E
Subjt:  RLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

AT4G25500.4 arginine/serine-rich splicing factor 352.0e-11061.52Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER      GG    GGGSRRSS++ R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVH-SRSRSP
        SPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++ R RGSP+YGR R  N SP RRER            SP   S  PN+ R   S + SP
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVH-SRSRSP

Query:  YGRERGSPADGRGTSYSP---HDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        + +E  SP +G G   SP    +R RS+P+NG  +   ++G       Y   +SP  +  +  SP A+E
Subjt:  YGRERGSPADGRGTSYSP---HDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-10261.29Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +R       GG G  GGSRRSS+  R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPNHSPYR-RERERSTDHVRAPSHSPPHLSERPNDDRVHSR
        SPYRRERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+R R   SPDY    R R    SP     R RS    R  S SPP     P + R  SR
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPNHSPYR-RERERSTDHVRAPSHSPPHLSERPNDDRVHSR

Query:  SRSPY--GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        S  PY   RE  SP            R +S+P+NG  +    + E      Y    SP  +   S SP AEE
Subjt:  SRSPY--GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.2e-10361.29Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +R       GG G  GGSRRSS+  R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSP

Query:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPNHSPYR-RERERSTDHVRAPSHSPPHLSERPNDDRVHSR
        SPYRRERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+R R   SPDY    R R    SP     R RS    R  S SPP     P + R  SR
Subjt:  SPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPNHSPYR-RERERSTDHVRAPSHSPPHLSERPNDDRVHSR

Query:  SRSPY--GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE
        S  PY   RE  SP            R +S+P+NG  +    + E      Y    SP  +   S SP AEE
Subjt:  SRSPY--GRERGSPADGRGTSYSPHDRERSNPDNGHDQRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCGATTTTCTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTGGATATGAAATCTGGTTT
TGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCGCTTGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAAC
AAGAGCGTGGCATTAGAAGACCAGGTGGAGGTGGAGGTGGAGGTGGAGGAGGTTCAAGGAGATCCTCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATCAACTTT
GACCCATATCATACTAGGACAAGGGATTTGGAGAGGCACTTTGATCCTTATGGTAAGATATTGAGTGTAAGGATCCGAAGGAATTTTGCATTTGTCCAGTATGAATTGCA
GGAGGATGCCACCAGAGCATTGGAACTTACAAACATGAGCAAATTGATGGATCGTGTGATTTCGGTGGAATATGCTGTTCGAGATGATGATGAGAAAAGAAATGGATATA
GTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGGCGATCCCCTAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAACAATGGTATTAGCCGCAGT
CCTTATAGGAGACAAAGGGCTAGTCCCGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGGGGTTCTCCTGATTATGGTCGTGGTCGTAGCCC
CAATCATAGTCCTTATAGAAGAGAGAGAGAGAGATCAACTGACCATGTTAGGGCCCCTAGCCATAGTCCTCCCCATCTGAGTGAACGACCAAATGATGATCGAGTCCACA
GCCGAAGTCGCAGTCCTTATGGGAGAGAAAGGGGGAGCCCTGCTGATGGACGTGGCACTAGCTATAGTCCTCATGATAGAGAAAGGTCAAACCCTGACAATGGTCACGAC
CAGCGACTAAATACAGTAGGAGAACCTGGGGATAGCCCCAGTTATGGTCGGACTCAAAGCCCAAAGCATCAGGGATATAATAGCCATTCACCTCAAGCAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCGATTTTCTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTGGATATGAAATCTGGTTT
TGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCGCTTGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAAC
AAGAGCGTGGCATTAGAAGACCAGGTGGAGGTGGAGGTGGAGGTGGAGGAGGTTCAAGGAGATCCTCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATCAACTTT
GACCCATATCATACTAGGACAAGGGATTTGGAGAGGCACTTTGATCCTTATGGTAAGATATTGAGTGTAAGGATCCGAAGGAATTTTGCATTTGTCCAGTATGAATTGCA
GGAGGATGCCACCAGAGCATTGGAACTTACAAACATGAGCAAATTGATGGATCGTGTGATTTCGGTGGAATATGCTGTTCGAGATGATGATGAGAAAAGAAATGGATATA
GTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGGCGATCCCCTAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAACAATGGTATTAGCCGCAGT
CCTTATAGGAGACAAAGGGCTAGTCCCGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGGGGTTCTCCTGATTATGGTCGTGGTCGTAGCCC
CAATCATAGTCCTTATAGAAGAGAGAGAGAGAGATCAACTGACCATGTTAGGGCCCCTAGCCATAGTCCTCCCCATCTGAGTGAACGACCAAATGATGATCGAGTCCACA
GCCGAAGTCGCAGTCCTTATGGGAGAGAAAGGGGGAGCCCTGCTGATGGACGTGGCACTAGCTATAGTCCTCATGATAGAGAAAGGTCAAACCCTGACAATGGTCACGAC
CAGCGACTAAATACAGTAGGAGAACCTGGGGATAGCCCCAGTTATGGTCGGACTCAAAGCCCAAAGCATCAGGGATATAATAGCCATTCACCTCAAGCAGAGGAATGA
Protein sequenceShow/hide protein sequence
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTRPSKTLFVINF
DPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRS
PYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSTDHVRAPSHSPPHLSERPNDDRVHSRSRSPYGRERGSPADGRGTSYSPHDRERSNPDNGHD
QRLNTVGEPGDSPSYGRTQSPKHQGYNSHSPQAEE