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Lag0018138 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018138
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:17299110..17300275
RNA-Seq ExpressionLag0018138
SyntenyLag0018138
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.4e-1058.62Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV
        TFG G +++T++V FLVV+   +YNAILGRPT+H LK + STYHQ  KFPT  GVG +
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]1.4e-1060.34Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV
        TFG G + IT++V FLVVD   +YNAILGRPT+H LK + STYH+ LKFPT+ G+  V
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV

XP_023873453.1 uncharacterized protein LOC111986047 [Quercus suber]1.1e-1042.16Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAVSVLEERLEDFLGLPMLFSQKSVRTPGTTTMLEERPGKIQSLQ
        + G+  Q IT+ VTFLVVDC   YNAI+GRPTL+  K V STYH ++KFPTE GVG     E R           +   +  P  T  +EE+    + ++
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAVSVLEERLEDFLGLPMLFSQKSVRTPGTTTMLEERPGKIQSLQ

Query:  KL
        KL
Subjt:  KL

XP_023905134.1 uncharacterized protein LOC112016906 [Quercus suber]8.3e-1164.29Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVG
        T G+  Q IT+ +TFLVVDC   YNAI+GRPTL+  KVV STYH ++KFPTE GVG
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVG

XP_030958874.1 uncharacterized protein LOC115980804 [Quercus lobata]1.4e-1067.86Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVG
        T G+  Q ITR VTFLVVDC   YNAILGRPTL+  K V STYH ++KFPTE GVG
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVG

TrEMBL top hitse value%identityAlignment
A0A2N9HRX3 Ribonuclease H2.6e-1058.62Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV
        T G   +T+++ V FLVVDC   YNAI+GRPTL+ L+ V STYH +LKFPTE G+G V
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV

A0A6J1D8C9 uncharacterized protein LOC1110183002.6e-1055.17Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV
        TFG G ++IT ++ FLV+D   +YNAILGRPT+H LK + STYHQ + FPT  G+G +
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV

A0A6J1DQY2 uncharacterized protein LOC1110223211.2e-1058.62Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV
        TFG G +++T++V FLVV+   +YNAILGRPT+H LK + STYHQ  KFPT  GVG +
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV

A0A6J1DV51 uncharacterized protein LOC1110246626.9e-1160.34Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV
        TFG G + IT++V FLVVD   +YNAILGRPT+H LK + STYH+ LKFPT+ G+  V
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV

A0A6J1DXV4 uncharacterized protein LOC1110251472.0e-1056.9Show/hide
Query:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV
        TFG G +++T+++ FLVVD   +YNAILGR T+H LK + STYHQ +KFPT  GVG +
Subjt:  TFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLKVVASTYHQILKFPTEEGVGAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATTTTAGGAGGACCATCCGGTGGAGAGTCGGGCAAAAAGCGAAAGGCCGCAATTCGAGAAACATGGCAAGAACCGGGAGAGCAAGATGTTCTCTCAACCGCCG
CGTTCAATGCGATGAAGCTAGGAAGGGATCGCGTAAAGCCAAGCCTCACACCATTGGTGGGCTTTGGTGGAGAAAGGGTAAGTCCACAAGGGTGCATCGAGCTGCCGGTA
CCTTTGGTGAGGGACAACAGACGATCACAAGGCTAGTCACTTTCCTGGTGGTGGACTGTGTGCCGACATATAATGCTATCTTGGGGCGACCAACCCTGCATGGGCTGAAG
GTAGTAGCTTCCACTTATCACCAAATCCTGAAATTTCCAACTGAAGAAGGTGTAGGGGCAGTAAGTGTGCTTGAAGAGAGGCTCGAGGACTTCCTAGGCCTCCCCATGCT
TTTTTCCCAGAAGAGTGTACGCACCCCTGGGACGACCACGATGCTTGAAGAGAGGCCCGGGAAAATCCAAAGCCTCCAAAAGCTTTTTCCCCAGAATAGTGTACGCACCC
CTAGGACGGCCATGATGCTTGAAGAGAGGTCTGAGAAAATCTCAAGCCTCCCCAAACTTTTTCCTCAGAAGAGTGTACGCACCCCTAGGATGACCATGATGCTTGAAGAG
AGGCCCGGGAAAATCCCAAGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTCGCACCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGATTTTAGGAGGACCATCCGGTGGAGAGTCGGGCAAAAAGCGAAAGGCCGCAATTCGAGAAACATGGCAAGAACCGGGAGAGCAAGATGTTCTCTCAACCGCCG
CGTTCAATGCGATGAAGCTAGGAAGGGATCGCGTAAAGCCAAGCCTCACACCATTGGTGGGCTTTGGTGGAGAAAGGGTAAGTCCACAAGGGTGCATCGAGCTGCCGGTA
CCTTTGGTGAGGGACAACAGACGATCACAAGGCTAGTCACTTTCCTGGTGGTGGACTGTGTGCCGACATATAATGCTATCTTGGGGCGACCAACCCTGCATGGGCTGAAG
GTAGTAGCTTCCACTTATCACCAAATCCTGAAATTTCCAACTGAAGAAGGTGTAGGGGCAGTAAGTGTGCTTGAAGAGAGGCTCGAGGACTTCCTAGGCCTCCCCATGCT
TTTTTCCCAGAAGAGTGTACGCACCCCTGGGACGACCACGATGCTTGAAGAGAGGCCCGGGAAAATCCAAAGCCTCCAAAAGCTTTTTCCCCAGAATAGTGTACGCACCC
CTAGGACGGCCATGATGCTTGAAGAGAGGTCTGAGAAAATCTCAAGCCTCCCCAAACTTTTTCCTCAGAAGAGTGTACGCACCCCTAGGATGACCATGATGCTTGAAGAG
AGGCCCGGGAAAATCCCAAGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTCGCACCCCTAG
Protein sequenceShow/hide protein sequence
MNDFRRTIRWRVGQKAKGRNSRNMARTGRARCSLNRRVQCDEARKGSRKAKPHTIGGLWWRKGKSTRVHRAAGTFGEGQQTITRLVTFLVVDCVPTYNAILGRPTLHGLK
VVASTYHQILKFPTEEGVGAVSVLEERLEDFLGLPMLFSQKSVRTPGTTTMLEERPGKIQSLQKLFPQNSVRTPRTAMMLEERSEKISSLPKLFPQKSVRTPRMTMMLEE
RPGKIPSLPKLFPRRVSHP