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Lag0018154 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018154
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr5:17558320..17558901
RNA-Seq ExpressionLag0018154
SyntenyLag0018154
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138036.1 uncharacterized protein LOC111009292 [Momordica charantia]1.9e-2647.55Show/hide
Query:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDV
        R  LFH DHGH+  +C  L++E+E LIR GYLKE++  ED  + +   +D  K    ++ ++ EA ++  PHNDALV TL +ANAK+++IL+D G S ++
Subjt:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDV

Query:  LSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
        +SL  ++AM LG  +LK S  PLVGF GE+V P+G IEL +TF
Subjt:  LSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]1.4e-2444.59Show/hide
Query:  FHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPH---------LDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRG
        FH DH H+  +C  L++E+E LI+ GYLKE+V  +D  + +  R+ +A    H         ++  E E  +I  PHNDALV  L +ANAK++ IL+D G
Subjt:  FHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPH---------LDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRG

Query:  RSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
         S D++SL  ++ M LG   LK S  PLVGF GE V P+G IELP+TF
Subjt:  RSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]1.3e-3049.33Show/hide
Query:  YLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFV------TNEDQSSPRPTRDDRA---KAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILID
        +LFHRDHGH+  +C  L++E+E LIR+GYLKE+V       N +  S  P R+ R    +    L+ +E EA ++  PHNDALV TL +ANAK++RIL+D
Subjt:  YLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFV------TNEDQSSPRPTRDDRA---KAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILID

Query:  RGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
         G ST ++SL  ++AM LG + LK S  PLVGF GE+V P+G IELP+ F
Subjt:  RGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]8.1e-2544.16Show/hide
Query:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNE----DQSSPRPTRDDRAKAHPH-------LDITEAEAANIHQPHNDALVGTLMVANAKIYR
        R  LFHRDH H+  +C  L++E+E LIR GYLKE    E    D    R  R+     H +       ++ +E EA  +   HNDALV TL +AN K++R
Subjt:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNE----DQSSPRPTRDDRAKAHPH-------LDITEAEAANIHQPHNDALVGTLMVANAKIYR

Query:  ILIDRGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
        IL+D G S D++S   ++AM L  ++LK S  PLVGF GE+V  +G IELP+TF
Subjt:  ILIDRGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.8e-2438.04Show/hide
Query:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFV-------TNEDQSSP---------------------------RPTRDDRAKAHPH-------LD
        R  LFHRDHGH+  +C  L++E+E LIR GYLKE+V         E   SP                           R +R+     H +       ++
Subjt:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFV-------TNEDQSSP---------------------------RPTRDDRAKAHPH-------LD

Query:  ITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
         +E EA ++  PHNDALV  L +AN K++R+L+D G S D++S   ++AM L  ++LK S  PLVGF  E+V P+G IELP+TF
Subjt:  ITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

TrEMBL top hitse value%identityAlignment
A0A6J1C8I1 uncharacterized protein LOC1110092929.4e-2747.55Show/hide
Query:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDV
        R  LFH DHGH+  +C  L++E+E LIR GYLKE++  ED  + +   +D  K    ++ ++ EA ++  PHNDALV TL +ANAK+++IL+D G S ++
Subjt:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDV

Query:  LSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
        +SL  ++AM LG  +LK S  PLVGF GE+V P+G IEL +TF
Subjt:  LSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

A0A6J1DAK4 uncharacterized protein LOC1110189026.7e-2544.59Show/hide
Query:  FHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPH---------LDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRG
        FH DH H+  +C  L++E+E LI+ GYLKE+V  +D  + +  R+ +A    H         ++  E E  +I  PHNDALV  L +ANAK++ IL+D G
Subjt:  FHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPH---------LDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRG

Query:  RSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
         S D++SL  ++ M LG   LK S  PLVGF GE V P+G IELP+TF
Subjt:  RSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

A0A6J1DP33 uncharacterized protein LOC1110228866.3e-3149.33Show/hide
Query:  YLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFV------TNEDQSSPRPTRDDRA---KAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILID
        +LFHRDHGH+  +C  L++E+E LIR+GYLKE+V       N +  S  P R+ R    +    L+ +E EA ++  PHNDALV TL +ANAK++RIL+D
Subjt:  YLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFV------TNEDQSSPRPTRDDRA---KAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILID

Query:  RGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
         G ST ++SL  ++AM LG + LK S  PLVGF GE+V P+G IELP+ F
Subjt:  RGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

A0A6J1DRG9 uncharacterized protein LOC1110235873.9e-2544.16Show/hide
Query:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNE----DQSSPRPTRDDRAKAHPH-------LDITEAEAANIHQPHNDALVGTLMVANAKIYR
        R  LFHRDH H+  +C  L++E+E LIR GYLKE    E    D    R  R+     H +       ++ +E EA  +   HNDALV TL +AN K++R
Subjt:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNE----DQSSPRPTRDDRAKAHPH-------LDITEAEAANIHQPHNDALVGTLMVANAKIYR

Query:  ILIDRGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
        IL+D G S D++S   ++AM L  ++LK S  PLVGF GE+V  +G IELP+TF
Subjt:  ILIDRGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

A0A6J1DWY0 uncharacterized protein LOC1110252936.7e-2538.59Show/hide
Query:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFV-------TNEDQSSP---------------------------RPTRDDRAKAHPH-------LD
        R  LFHRDHGH+  +C  L++E+E LIR GYLKE+V         E   SP                           R +R+     H +       ++
Subjt:  RCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFV-------TNEDQSSP---------------------------RPTRDDRAKAHPH-------LD

Query:  ITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF
         +E EA ++  PHNDALV  L +AN K++R+L+D G S D+LS   ++AM L  ++LK S  PLVGF  E+V P+G IELP+TF
Subjt:  ITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDVLSLMTFEAMKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGGTGTTACCTCTTCCATCGAGACCATGGACATTCAATCATGAATTGCATTCAATTGGAGGATGAAATTGAAGCATTGATTCGTAATGGATACCTGAAGGAGTT
CGTCACTAATGAAGACCAGTCCAGCCCGAGGCCGACCAGAGATGACCGAGCAAAGGCACATCCCCATTTGGATATCACTGAGGCTGAGGCAGCAAACATCCACCAACCAC
ACAATGATGCTTTGGTTGGCACTCTAATGGTAGCCAATGCTAAAATCTATCGGATCCTAATCGATAGAGGAAGGTCGACTGATGTTCTTTCTCTAATGACCTTTGAGGCA
ATGAAGTTGGGGAGAGAACTCTTGAAACCAAGCCTTACACCACTTGTAGGGTTTGAAGGAGAACAAGTGACACCCAAAGGTAGCATAGAACTCCCTATGACCTTTAGGGA
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGGTGTTACCTCTTCCATCGAGACCATGGACATTCAATCATGAATTGCATTCAATTGGAGGATGAAATTGAAGCATTGATTCGTAATGGATACCTGAAGGAGTT
CGTCACTAATGAAGACCAGTCCAGCCCGAGGCCGACCAGAGATGACCGAGCAAAGGCACATCCCCATTTGGATATCACTGAGGCTGAGGCAGCAAACATCCACCAACCAC
ACAATGATGCTTTGGTTGGCACTCTAATGGTAGCCAATGCTAAAATCTATCGGATCCTAATCGATAGAGGAAGGTCGACTGATGTTCTTTCTCTAATGACCTTTGAGGCA
ATGAAGTTGGGGAGAGAACTCTTGAAACCAAGCCTTACACCACTTGTAGGGTTTGAAGGAGAACAAGTGACACCCAAAGGTAGCATAGAACTCCCTATGACCTTTAGGGA
TTGA
Protein sequenceShow/hide protein sequence
MNRCYLFHRDHGHSIMNCIQLEDEIEALIRNGYLKEFVTNEDQSSPRPTRDDRAKAHPHLDITEAEAANIHQPHNDALVGTLMVANAKIYRILIDRGRSTDVLSLMTFEA
MKLGRELLKPSLTPLVGFEGEQVTPKGSIELPMTFRD