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Lag0018157 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018157
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr5:17726092..17726731
RNA-Seq ExpressionLag0018157
SyntenyLag0018157
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]5.8e-0841.67Show/hide
Query:  QVLHHPVRLKKNNLGEMVAMFIKE-----QQVLN--VNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRS-------EK
        Q   HP   KK++L +++  FI E      ++ N    ++  +  + T++KNMEVQIG+ A  +N +QKGKF SD E  PRE CK VTLRS       EK
Subjt:  QVLHHPVRLKKNNLGEMVAMFIKE-----QQVLN--VNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRS-------EK

Query:  KEDEKKNDRHEEKLNEEEVV
        K+ E+     EE+ N+EEVV
Subjt:  KEDEKKNDRHEEKLNEEEVV

XP_022159119.1 uncharacterized protein LOC111025551 [Momordica charantia]6.8e-0953.66Show/hide
Query:  LQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRS-------EKKEDEKKNDRHEEKLNEEEVV
        ++  +  + TA+KNMEVQIG+ AS +N +QKGKF SDTE NPRE CK VTLRS       EKK+ E+     EE+ N+EEVV
Subjt:  LQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRS-------EKKEDEKKNDRHEEKLNEEEVV

XP_024019991.1 uncharacterized protein LOC112091203 [Morus notabilis]5.8e-0847.06Show/hide
Query:  FIKEQQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKEDEKKNDRHEEKLNEEEV
        F K++  L+ N++T  NN +  +K++EVQIG+ A+AV     GKF SDTEPNP++ CK +TLRSE++ +  K    E+K+ EEEV
Subjt:  FIKEQQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKEDEKKNDRHEEKLNEEEV

XP_024020480.1 uncharacterized protein LOC112091333 [Morus notabilis]2.9e-0737.4Show/hide
Query:  FCSHRQVLHHP------VRLKKNNLGEMVAMFIKE-------QQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTL
        + ++R VL  P      V  KK ++ ++++ FI E        +    N++T  NN +  +K++EVQIG+ A+ V     GKF SDTEPNP + CK +TL
Subjt:  FCSHRQVLHHP------VRLKKNNLGEMVAMFIKE-------QQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTL

Query:  RSEKKEDEKKNDRHEEKLNEEEV
        RS K+ +  K    E+K+ EEEV
Subjt:  RSEKKEDEKKNDRHEEKLNEEEV

XP_024032903.1 uncharacterized protein LOC112095347 [Morus notabilis]2.9e-0736.09Show/hide
Query:  FCSHRQVLHHP------VRLKKNNLGEMVAMFIKE-------QQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTL
        + ++R VL  P      V  KK ++ ++++ FI E        +    N++T  NN +  +K++EVQIG+ A+ V     GKF SDTEPNP++ CK +TL
Subjt:  FCSHRQVLHHP------VRLKKNNLGEMVAMFIKE-------QQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTL

Query:  RSEKKEDEKKNDRHEEKLNEEEVVPCNYHDEAR
        RS K+ +  K    E+K  EEEV      + AR
Subjt:  RSEKKEDEKKNDRHEEKLNEEEVVPCNYHDEAR

TrEMBL top hitse value%identityAlignment
A0A2P5A3N0 Uncharacterized protein9.0e-0738.05Show/hide
Query:  LHHPVRLKKNNLGEMVAMFIKE-------QQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKE-------
        L+ PV  KK +L ++++ FI E        + L  N++T  NN +  +K++EVQIG+ A+++      KF SDTE NP++ CK +TLRSEK+        
Subjt:  LHHPVRLKKNNLGEMVAMFIKE-------QQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKE-------

Query:  ---DEKKNDRHEE
           DE K+D  EE
Subjt:  ---DEKKNDRHEE

A0A2P5BPI6 Uncharacterized protein9.0e-0735.19Show/hide
Query:  PVRLKKNNLGEMVAMFIKE-------QQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKEDEKKNDRHEE
        PV  KK++L ++++ FI E        +    N++T  NN +  +K++EVQIG+ A+++   Q GKF SDTE NP++ CK +TLR+ K+ +  +   +  
Subjt:  PVRLKKNNLGEMVAMFIKE-------QQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKEDEKKNDRHEE

Query:  KLNEEEVV
         + +E VV
Subjt:  KLNEEEVV

A0A6J1DU19 uncharacterized protein LOC1110243612.8e-0841.67Show/hide
Query:  QVLHHPVRLKKNNLGEMVAMFIKE-----QQVLN--VNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRS-------EK
        Q   HP   KK++L +++  FI E      ++ N    ++  +  + T++KNMEVQIG+ A  +N +QKGKF SD E  PRE CK VTLRS       EK
Subjt:  QVLHHPVRLKKNNLGEMVAMFIKE-----QQVLN--VNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRS-------EK

Query:  KEDEKKNDRHEEKLNEEEVV
        K+ E+     EE+ N+EEVV
Subjt:  KEDEKKNDRHEEKLNEEEVV

A0A6J1E1F6 uncharacterized protein LOC1110255513.3e-0953.66Show/hide
Query:  LQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRS-------EKKEDEKKNDRHEEKLNEEEVV
        ++  +  + TA+KNMEVQIG+ AS +N +QKGKF SDTE NPRE CK VTLRS       EKK+ E+     EE+ N+EEVV
Subjt:  LQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRS-------EKKEDEKKNDRHEEKLNEEEVV

A0A6P9DWY0 uncharacterized protein LOC1183440269.0e-0750Show/hide
Query:  NLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKEDEKKND
        N++T  +N   A+KN+EVQIG+ A+ +NA Q+G F S+TE NPREQCK +TLRS ++ D   ++
Subjt:  NLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKEDEKKND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACTTCTCGTACTCAAACACGAAGAATGTTTTGCAGCCACCGCCAGGTTTTGCATCATCCAGTGCGCCTAAAGAAGAATAACCTGGGGGAGATGGTGGCTATGTT
TATAAAAGAACAACAAGTGTTGAATGTGAATCTCCAGACAACAGTTAATAACCACGACACAGCTCTGAAAAATATGGAAGTTCAAATAGGAAAGACCGCTTCAGCGGTGA
ATGCCCTTCAGAAGGGAAAATTTTCAAGCGACACTGAACCTAACCCAAGAGAGCAGTGCAAGATGGTGACACTAAGAAGTGAAAAGAAAGAAGATGAAAAGAAGAATGAC
AGGCATGAAGAGAAACTGAACGAGGAAGAAGTGGTTCCATGCAACTATCACGACGAGGCTCGCACATTAGCCTGCACAAACGGAGGGGCGAATGTCCAACCTTTGACTAC
AGGGAGTTGCATTTTCCTCAACGCTTTAAAAATGTTAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAACTTCTCGTACTCAAACACGAAGAATGTTTTGCAGCCACCGCCAGGTTTTGCATCATCCAGTGCGCCTAAAGAAGAATAACCTGGGGGAGATGGTGGCTATGTT
TATAAAAGAACAACAAGTGTTGAATGTGAATCTCCAGACAACAGTTAATAACCACGACACAGCTCTGAAAAATATGGAAGTTCAAATAGGAAAGACCGCTTCAGCGGTGA
ATGCCCTTCAGAAGGGAAAATTTTCAAGCGACACTGAACCTAACCCAAGAGAGCAGTGCAAGATGGTGACACTAAGAAGTGAAAAGAAAGAAGATGAAAAGAAGAATGAC
AGGCATGAAGAGAAACTGAACGAGGAAGAAGTGGTTCCATGCAACTATCACGACGAGGCTCGCACATTAGCCTGCACAAACGGAGGGGCGAATGTCCAACCTTTGACTAC
AGGGAGTTGCATTTTCCTCAACGCTTTAAAAATGTTAAATTAG
Protein sequenceShow/hide protein sequence
MRTSRTQTRRMFCSHRQVLHHPVRLKKNNLGEMVAMFIKEQQVLNVNLQTTVNNHDTALKNMEVQIGKTASAVNALQKGKFSSDTEPNPREQCKMVTLRSEKKEDEKKND
RHEEKLNEEEVVPCNYHDEARTLACTNGGANVQPLTTGSCIFLNALKMLN