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Lag0018160 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018160
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionERD (early-responsive to dehydration stress) family protein
Genome locationchr5:17779375..17782369
RNA-Seq ExpressionLag0018160
SyntenyLag0018160
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0005227 - calcium activated cation channel activity (molecular function)
InterPro domainsIPR045122 - Calcium permeable stress-gated cation channel 1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3495133.1 unnamed protein product [Digitaria exilis]4.2e-1648.51Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLVINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALF
        +LGSI+AG   E++++FLHQ PT+       A+  K +FFM YIMVD WA    +++     +INVYNQ YES  AFWP +H+RI   LLIS +TLF L 
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLVINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALF

Query:  T
        +
Subjt:  T

KAB2017820.1 hypothetical protein ES319_D08G187900v1 [Gossypium barbadense]3.0e-1437.32Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-------------------------------
        +LGSI+ G   E++HSFLHQ PT+             ++  K +FF+ +IMVD WAG A +IL+L PLV                               
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-------------------------------

Query:  ----INVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
            INVYNQ YES  AFWPH+H+RI   L+ISQ+    L +
Subjt:  ----INVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

KAG5405156.1 hypothetical protein IGI04_011275 [Brassica rapa subsp. trilocularis]3.6e-1547.06Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL
        +LGSI+ G   +++ SFL Q PT+       ++  K +FF+ YIMVD WAG A +IL+L PL VINVY+Q YES   +WP +H R+TI L+ISQ+ +  L
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL

Query:  FT
         +
Subjt:  FT

TYG58156.1 hypothetical protein ES288_D08G199500v1 [Gossypium darwinii]1.8e-1437.86Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-------------------------------------
        +LGSI+ G   E++HSFLHQ PT+       ++  K +FF+ +IMVD WAG A +IL+L PLV                                     
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-------------------------------------

Query:  --INVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
          INVYNQ YES  AFWPH+H+RI   L+ISQ+    L +
Subjt:  --INVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

TYH59023.1 hypothetical protein ES332_D08G195100v1 [Gossypium tomentosum]6.1e-1538.97Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-----------------------------------IN
        +LGSI+ G   E++HSFLHQ PT+       ++  K +FF+ +IMVD WAG A +IL+L PLV                                   IN
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-----------------------------------IN

Query:  VYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
        VYNQ YES  AFWPH+H+RI   L+ISQ+    L +
Subjt:  VYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

TrEMBL top hitse value%identityAlignment
A0A1D6M4Q4 CSC1-like protein3.3e-1439.64Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV----------INVYNQHYESVGAFWPHIHTRITIGLL
        +LGS++ G   +++ +F+HQ   K      +++  K +FFM YIMVD W+G A ++L+L  LV          INVY QHYES   FWP +H R+ I L+
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV----------INVYNQHYESVGAFWPHIHTRITIGLL

Query:  ISQMTLFALFT
        +SQ+ L  L +
Subjt:  ISQMTLFALFT

A0A1D6M4Q6 CSC1-like protein3.3e-1439.64Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV----------INVYNQHYESVGAFWPHIHTRITIGLL
        +LGS++ G   +++ +F+HQ   K      +++  K +FFM YIMVD W+G A ++L+L  LV          INVY QHYES   FWP +H R+ I L+
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV----------INVYNQHYESVGAFWPHIHTRITIGLL

Query:  ISQMTLFALFT
        +SQ+ L  L +
Subjt:  ISQMTLFALFT

A0A5D2BRH5 Uncharacterized protein8.6e-1537.86Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-------------------------------------
        +LGSI+ G   E++HSFLHQ PT+       ++  K +FF+ +IMVD WAG A +IL+L PLV                                     
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-------------------------------------

Query:  --INVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
          INVYNQ YES  AFWPH+H+RI   L+ISQ+    L +
Subjt:  --INVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

A0A5D2JZ84 Integrase catalytic domain-containing protein3.0e-1538.97Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-----------------------------------IN
        +LGSI+ G   E++HSFLHQ PT+       ++  K +FF+ +IMVD WAG A +IL+L PLV                                   IN
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-----------------------------------IN

Query:  VYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
        VYNQ YES  AFWPH+H+RI   L+ISQ+    L +
Subjt:  VYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

A0A5J5QHX0 Uncharacterized protein1.5e-1437.32Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-------------------------------
        +LGSI+ G   E++HSFLHQ PT+             ++  K +FF+ +IMVD WAG A +IL+L PLV                               
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLV-------------------------------

Query:  ----INVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
            INVYNQ YES  AFWPH+H+RI   L+ISQ+    L +
Subjt:  ----INVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

SwissProt top hitse value%identityAlignment
Q5XEZ5 Calcium permeable stress-gated cation channel 12.1e-1027.84Show/hide
Query:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------
        +F+    +L S++AG   E+++SFL+Q   +       A+  K +FF+ YIMVD WAG A +IL L PL                               
Subjt:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------

Query:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL
                                               +INVYNQ YES  AFWP +H R+   L+ISQ+ L  L
Subjt:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL

Q8VZM5 CSC1-like protein At4g154302.8e-1028.65Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQ----LPTKKALS--KKGSFFMMYIMVDEWAGTAMKILQLGPL--------------------------------------
        +LGSI+ G   ++++SFL+Q    +P    +S   K +FF+ YIMVD WAG A +IL+L PL                                      
Subjt:  YLGSIMAGMTLEEMHSFLHQ----LPTKKALS--KKGSFFMMYIMVDEWAGTAMKILQLGPL--------------------------------------

Query:  --------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
                                        VINVYNQ YES G FWP +H R+   L++SQ+ L  L +
Subjt:  --------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

Q9FVQ5 CSC1-like protein At1g320908.0e-1051.56Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLVI
        +LGSI+AG   E++HSFLHQ P++       ++  K +FF+ YIMVD WAG A +IL+L PLVI
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPLVI

Q9FVQ5 CSC1-like protein At1g320901.7e-0762.5Show/hide
Query:  VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFTA
        +INVYNQ YES GAFWPH+H RI   LLISQ+ L  L  +
Subjt:  VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFTA

Q9LVE4 CSC1-like protein At3g216204.3e-1128.65Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL--------------------------------------
        +L SI+AG  L+++ SFL+Q  T+       ++  K +FF+ YIMVD WAG A +IL+L PL                                      
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL--------------------------------------

Query:  --------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
                                        +INVYNQ YES  AFWP +H R+ I L++SQ+ L  L +
Subjt:  --------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

Q9XEA1 Protein OSCA13.0e-1228.98Show/hide
Query:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------
        +F+    +LGS++AG   E+++SFL+Q P +       A+  K +FF+ YIMVD WAG A +IL L PL                               
Subjt:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------

Query:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL
                                               +INVYNQ YES  AFWP +H R+   L+ISQ+ L  L
Subjt:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL

Arabidopsis top hitse value%identityAlignment
AT3G21620.1 ERD (early-responsive to dehydration stress) family protein3.0e-1228.65Show/hide
Query:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL--------------------------------------
        +L SI+AG  L+++ SFL+Q  T+       ++  K +FF+ YIMVD WAG A +IL+L PL                                      
Subjt:  YLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL--------------------------------------

Query:  --------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT
                                        +INVYNQ YES  AFWP +H R+ I L++SQ+ L  L +
Subjt:  --------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFT

AT4G04340.1 ERD (early-responsive to dehydration stress) family protein2.1e-1328.98Show/hide
Query:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------
        +F+    +LGS++AG   E+++SFL+Q P +       A+  K +FF+ YIMVD WAG A +IL L PL                               
Subjt:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------

Query:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL
                                               +INVYNQ YES  AFWP +H R+   L+ISQ+ L  L
Subjt:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL

AT4G04340.2 ERD (early-responsive to dehydration stress) family protein2.1e-1328.98Show/hide
Query:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------
        +F+    +LGS++AG   E+++SFL+Q P +       A+  K +FF+ YIMVD WAG A +IL L PL                               
Subjt:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------

Query:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL
                                               +INVYNQ YES  AFWP +H R+   L+ISQ+ L  L
Subjt:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL

AT4G04340.3 ERD (early-responsive to dehydration stress) family protein2.1e-1328.98Show/hide
Query:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------
        +F+    +LGS++AG   E+++SFL+Q P +       A+  K +FF+ YIMVD WAG A +IL L PL                               
Subjt:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------

Query:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL
                                               +INVYNQ YES  AFWP +H R+   L+ISQ+ L  L
Subjt:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL

AT4G22120.1 ERD (early-responsive to dehydration stress) family protein1.5e-1127.84Show/hide
Query:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------
        +F+    +L S++AG   E+++SFL+Q   +       A+  K +FF+ YIMVD WAG A +IL L PL                               
Subjt:  LFHGGQCYLGSIMAGMTLEEMHSFLHQLPTK------KALSKKGSFFMMYIMVDEWAGTAMKILQLGPL-------------------------------

Query:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL
                                               +INVYNQ YES  AFWP +H R+   L+ISQ+ L  L
Subjt:  ---------------------------------------VINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTAAATTTCCAGAGTTCAGAAAACAGACATGTCAAGCATTACACTGTATTGGTTAGGAATGTACAATCACCAGCTCTAATGCCATCGATAACTTCTTTCAAAGA
AGTTATTCGCAACACTATCTATTCTATCAGCACAAATGGAAAACTTAGAGGGAGTCATTCAATCGAGGTTCCTGAAATTGGTTATACAAGGCTTTTTTCTTGGGTTGGTG
CTGCAATTCTTTCTTTTCATCATCCGAAAACTTTTGATCTTCTTGTCGAAAGTGGAAGGGCGTACATCACTTTCGAAGATAGAACGCCAGGCCACTGCGAAATACTATTA
TTTCATGGTGGTCAATGTTATTTAGGCAGTATTATGGCTGGCATGACATTGGAGGAAATGCATAGCTTCCTTCACCAACTTCCTACCAAAAAAGCATTATCGAAAAAAGG
GAGCTTTTTCATGATGTACATAATGGTGGATGAGTGGGCTGGAACTGCAATGAAGATTCTTCAACTAGGACCACTGGTAATCAATGTGTATAACCAACATTATGAGAGTG
TTGGTGCATTTTGGCCCCATATCCACACTCGCATTACTATTGGTCTGTTGATATCGCAGATGACTTTATTTGCTTTATTCACTGCAATTAATGTAATTTTGGACCACTCC
GATATACAAGGAGCTGATGAGGACAACCCGACAGGTGCTCAGAAACAGGACCGAAAAATGGACTCCAGAGGCGAAACGGGCCAAAAGGTCGGAGGGACCAGGTCTTGGCC
CGACCCCTGCTCGACATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTAAATTTCCAGAGTTCAGAAAACAGACATGTCAAGCATTACACTGTATTGGTTAGGAATGTACAATCACCAGCTCTAATGCCATCGATAACTTCTTTCAAAGA
AGTTATTCGCAACACTATCTATTCTATCAGCACAAATGGAAAACTTAGAGGGAGTCATTCAATCGAGGTTCCTGAAATTGGTTATACAAGGCTTTTTTCTTGGGTTGGTG
CTGCAATTCTTTCTTTTCATCATCCGAAAACTTTTGATCTTCTTGTCGAAAGTGGAAGGGCGTACATCACTTTCGAAGATAGAACGCCAGGCCACTGCGAAATACTATTA
TTTCATGGTGGTCAATGTTATTTAGGCAGTATTATGGCTGGCATGACATTGGAGGAAATGCATAGCTTCCTTCACCAACTTCCTACCAAAAAAGCATTATCGAAAAAAGG
GAGCTTTTTCATGATGTACATAATGGTGGATGAGTGGGCTGGAACTGCAATGAAGATTCTTCAACTAGGACCACTGGTAATCAATGTGTATAACCAACATTATGAGAGTG
TTGGTGCATTTTGGCCCCATATCCACACTCGCATTACTATTGGTCTGTTGATATCGCAGATGACTTTATTTGCTTTATTCACTGCAATTAATGTAATTTTGGACCACTCC
GATATACAAGGAGCTGATGAGGACAACCCGACAGGTGCTCAGAAACAGGACCGAAAAATGGACTCCAGAGGCGAAACGGGCCAAAAGGTCGGAGGGACCAGGTCTTGGCC
CGACCCCTGCTCGACATGCTAG
Protein sequenceShow/hide protein sequence
MRLNFQSSENRHVKHYTVLVRNVQSPALMPSITSFKEVIRNTIYSISTNGKLRGSHSIEVPEIGYTRLFSWVGAAILSFHHPKTFDLLVESGRAYITFEDRTPGHCEILL
FHGGQCYLGSIMAGMTLEEMHSFLHQLPTKKALSKKGSFFMMYIMVDEWAGTAMKILQLGPLVINVYNQHYESVGAFWPHIHTRITIGLLISQMTLFALFTAINVILDHS
DIQGADEDNPTGAQKQDRKMDSRGETGQKVGGTRSWPDPCSTC