CuGenDBv2

Gene ID	Lag0018163
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr5:17800448..17802202
RNA-Seq Expression	Lag0018163
Synteny	Lag0018163
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR026960 - Reverse transcriptase zinc-binding domain IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]

7.5e-82

31.56

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MS FKLP  +C +I +  A FWWG  + K   HW  W +M K K  GGLGFR + +FNQA++AKQ WR+ R PNS++ ++++ RY+K+  F  A +G+ P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH
        S  WRSI WG  + +KG RWR+G GK + + +D WI R    +P   +       VA L+D +N+W+ D +   F + D E IL     S + +DE++WH
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH

Query:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE
         DKKG +SVKS Y LA++ +       S+S  ++ +WK  W L++  + K   W+ +++I+PT  N+ K+     P+C  CK ++ET +H++ ECK  R 
Subjt:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE

Query:  GWETFIPTTHKLFDLCRLSWDP-----KDYWWWLEENLNTEELARSAIII---WKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTG
                  K++DL  L   P     +D++  ++E  +    A + ++I   W +W  RN+     +   + FL       ++ ++       V     
Subjt:  GWETFIPTTHKLFDLCRLSWDP-----KDYWWWLEENLNTEELARSAIII---WKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTG

Query:  NLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALISS
            Q +W+ P  N  K+N DA+   K    GLG IV D+EG ++  G+++      + + EA+A+  GL ++++  +  S+   VESD  EV+  L ++
Subjt:  NLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALISS

Query:  TEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAM
            +++      ++  + +   ++F    R  NT AH + + A+
Subjt:  TEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAM

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]

8.3e-81

32.06

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MSCF+LP  +  E   + A FWWG ++  KK HW++W ++   K  GG+GFR +  FN+A+LAKQ WRI  +PNS+L ++L+GRYFKD +F+EA I   P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLD-EKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIW
        S  WRSI WGRDL +KG RWR+G+G  + I  D W+  +   +           RV+ L+D E+  W+ D+VR  F+  +A+ IL+ P G    +D +IW
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLD-EKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIW

Query:  HPDKKGLFSVKSAYHLAMDIHKMTSA-SQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIP
        + +K G++SV+S Y +A+  +    A S S S++    W   WK++I  + K   W++  D +PT  N+ K+GV++   C FC +  E + HL W CK  
Subjt:  HPDKKGLFSVKSAYHLAMDIHKMTSA-SQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIP

Query:  REGWETFIPTTHKLFDLCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYL-------KDQVPKRT
           W          F + R S           E+L+  +     ++IW +W+ RN  A N+ T +       I   + EW N Y         + +  R 
Subjt:  REGWETFIPTTHKLFDLCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYL-------KDQVPKRT

Query:  GNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALIS
         N +++I WQ P    +KIN+DAS+       GLG I+++  G ++    + +     + + EA A +EGL+  S+                     +  
Subjt:  GNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALIS

Query:  STEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFH
        + ED+S+      + K+   +S    F+   R  N  AH + R+A+  H
Subjt:  STEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFH

XP_023905045.1 uncharacterized protein LOC112016795 [Quercus suber]

1.2e-79

32.85

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Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MS FKLPN++C E+     NFWWG+  G+ K  W+SW  MC  K+ GGLGFR + AFN A+LAKQ WR+  N  S+++++L+ RYF D +FL A +G  P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNL-KGFRVALLLDE-KNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEII
        S  WRSI   +D+ + G RW+VG G  I I RD W+ +    R     + L +   V+ L+DE   +W  D+V+  F   DA  IL  P  SK ++D +I
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNL-KGFRVALLLDE-KNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEII

Query:  WHPDKKGLFSVKSAYHLAMDIHKMTSASQ-SDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKI
        W    KG F+V SAY +A+ + +  +  + SD+   +  W+K+W L I  + KT  W+  ++I+PTKAN+  +GV  +P C  C    ET+ HL W+C+ 
Subjt:  WHPDKKGLFSVKSAYHLAMDIHKMTSASQ-SDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKI

Query:  PREGW-ETFIPTTHKLFDLCRLSW-DPKDYWWWL--EENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGN
          E W  T IP     FD   + + D  D  W+L   +++  + L     I W +W  RNR+   +   S+N +       +E+++  +     P+ T  
Subjt:  PREGW-ETFIPTTHKLFDLCRLSW-DPKDYWWWL--EENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGN

Query:  LSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKA-LLEGLKEISDTCNRRSIFLEVESDALEVINALISS
        L +  +W  P    +K+N+DA+    LG  G+G ++ D  G ++    Q +  + P+  LEA+A  ++     +     + + LE +S    + +AL  S
Subjt:  LSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKA-LLEGLKEISDTCNRRSIFLEVESDALEVINALISS

Query:  TEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFH
        T   + + +  E I+        ++  H  R  N  AH + + A   H
Subjt:  TEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFH

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]

2.1e-84

33.15

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Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MS FK+P  +C +I +  A FWWG  + +K  HW  W  +   K  GG+GFR +S+FNQA++AKQ WRI + P+S++ ++L+ RYFK   F+ A +G+ P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH
        S  WRSI WGR +  KG RWR+G+G+ + +  + WI R    +P           VA L+DEK QW+ED++   F   DAE I+  P   +  +D++IWH
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH

Query:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE
         DKKG +SVKS Y +AM I      S S+  +  ++W+ +WKL I  + K   W+   D++PT  N+ KK V   PMC  C   +ET +H + EC   R+
Subjt:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE

Query:  GWETFIPTTHKLFDL--CRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSSQI
         W  +     +L  +  C + W  +   +W  ++   E  A  A ++W +W  RN+     +  +   +  +    +E +K     + V K  GN   Q 
Subjt:  GWETFIPTTHKLFDL--CRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSSQI

Query:  QWQNPKPNCW-KINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALISSTEDIS
        QW +P PN W K+N DA+   +  + GLG +V DS+G+     ++ +     + + EA A+  GLK          IF   ESD+LEVI+ +   +  ++
Subjt:  QWQNPKPNCW-KINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALISSTEDIS

Query:  DLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAM
        ++      I++        +  H  R  N  AH + + A+
Subjt:  DLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAM

XP_030502375.1 uncharacterized protein LOC115717530 [Cannabis sativa]

1.3e-81

33.1

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MSCF+LP   C +++ +  NFWWG      K HW SW  +CK K  GG+GFR    FNQA+LAKQ+WRI  NP+S+L ++L+ RYF +  FLEA +G++P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH
        SLTW+ I W R+L  KG RW+VG G+ I  D DPWI       P L +    G  VA L+ ++ QW   ++   FS  D + IL  P      +D +IWH
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH

Query:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE
            GL++V S YHL  D+  M  +  S S+  +S WK  W L + P+ K   WK + D +P    ++K+ V  +  C  CK+  E+  H ++ C+  R 
Subjt:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE

Query:  GWETFIPTTHKLFD-LCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSSQIQ
         W      +   FD     +    DY + L   L+  E+ +    +W +W+ RNR     Q   A  L    A  +  ++N   +      T   + Q  
Subjt:  GWETFIPTTHKLFD-LCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSSQIQ

Query:  WQ-----------NPKP----------------NCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRR
         Q           NP+P                N +K+N DA+     GV G+G I+ DS G +V    +++  N+    +EA AL   L   +    ++
Subjt:  WQ-----------NPKP----------------NCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRR

Query:  SIFLEVESDALEVINALISSTEDISDLKNFTEQIKDIA-LKSF--GMEFHHCSRFLNTDAHCVVRKAM
          F   ESDAL V+NAL +    IS   +F++ I DI+ L SF   +   H     N  AH + + A+
Subjt:  SIFLEVESDALEVINALISSTEDISDLKNFTEQIKDIA-LKSF--GMEFHHCSRFLNTDAHCVVRKAM

TrEMBL top hits

e value

%identity

Alignment

A0A2N9GI95 Reverse transcriptase domain-containing protein

1.8e-81

31.48

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MSCF+LPN +  EI+ L   FWWG++  K K HW+SW  +CK K SGG+GFR++  FN+A+LAKQ WR+  NP+S+ YK+ + +YF   + LEA   +  
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGN---ARPALVQDNLKGFRVALLLDEKNQ-WKEDMVRLGFSRMDAEDILNTPTGSKESKDE
        S  W+SI   RDL +KG  WRVG+G  I I  D W+    N   + P +   NL    VA L+D +++ WKE+++R  F   DA  I+  P  S    D 
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGN---ARPALVQDNLKGFRVALLLDEKNQ-WKEDMVRLGFSRMDAEDILNTPTGSKESKDE

Query:  IIWHPDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECK
        ++W   + G ++V+S YHL +           D+ +  ++W  +W L + P+++ C W+   + +PT+ N+  + +  +P C  C  ++ETT H +W CK
Subjt:  IIWHPDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECK

Query:  IPREGWETFIPTTHKLFDLCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSS
          +  W+T +P   +L  +     D  D W    + L+T EL   +++ W +W  RNR+  +  T     +     + I ++ N   +  V       S+
Subjt:  IPREGWETFIPTTHKLFDLCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSS

Query:  QIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALISSTEDI
         I+WQ P    +K+N D +        GLG I+ ++ G+++    Q++     I+ +EA A    ++   D        +E+E D+  V++AL+ S    
Subjt:  QIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALISSTEDI

Query:  SDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKA
        +   +  E IK IA     + F H  R  N  AH + ++A
Subjt:  SDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKA

A0A6J1DAR4 uncharacterized protein LOC111018954

4.0e-81

32.06

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MSCF+LP  +  E   + A FWWG ++  KK HW++W ++   K  GG+GFR +  FN+A+LAKQ WRI  +PNS+L ++L+GRYFKD +F+EA I   P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLD-EKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIW
        S  WRSI WGRDL +KG RWR+G+G  + I  D W+  +   +           RV+ L+D E+  W+ D+VR  F+  +A+ IL+ P G    +D +IW
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLD-EKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIW

Query:  HPDKKGLFSVKSAYHLAMDIHKMTSA-SQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIP
        + +K G++SV+S Y +A+  +    A S S S++    W   WK++I  + K   W++  D +PT  N+ K+GV++   C FC +  E + HL W CK  
Subjt:  HPDKKGLFSVKSAYHLAMDIHKMTSA-SQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIP

Query:  REGWETFIPTTHKLFDLCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYL-------KDQVPKRT
           W          F + R S           E+L+  +     ++IW +W+ RN  A N+ T +       I   + EW N Y         + +  R 
Subjt:  REGWETFIPTTHKLFDLCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYL-------KDQVPKRT

Query:  GNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALIS
         N +++I WQ P    +KIN+DAS+       GLG I+++  G ++    + +     + + EA A +EGL+  S+                     +  
Subjt:  GNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALIS

Query:  STEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFH
        + ED+S+      + K+   +S    F+   R  N  AH + R+A+  H
Subjt:  STEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFH

A0A803PQ30 Uncharacterized protein

6.2e-82

33.1

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MSCF+LP   C +++ +  NFWWG      K HW SW  +CK K  GG+GFR    FNQA+LAKQ+WRI  NP+S+L ++L+ RYF +  FLEA +G++P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH
        SLTW+ I W R+L  KG RW+VG G+ I  D DPWI       P L +    G  VA L+ ++ QW   ++   FS  D + IL  P      +D +IWH
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH

Query:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE
            GL++V S YHL  D+  M  +  S S+  +S WK  W L + P+ K   WK + D +P    ++K+ V  +  C  CK+  E+  H ++ C+  R 
Subjt:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE

Query:  GWETFIPTTHKLFD-LCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSSQIQ
         W      +   FD     +    DY + L   L+  E+ +    +W +W+ RNR     Q   A  L    A  +  ++N   +      T   + Q  
Subjt:  GWETFIPTTHKLFD-LCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSSQIQ

Query:  WQ-----------NPKP----------------NCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRR
         Q           NP+P                N +K+N DA+     GV G+G I+ DS G +V    +++  N+    +EA AL   L   +    ++
Subjt:  WQ-----------NPKP----------------NCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRR

Query:  SIFLEVESDALEVINALISSTEDISDLKNFTEQIKDIA-LKSF--GMEFHHCSRFLNTDAHCVVRKAM
          F   ESDAL V+NAL +    IS   +F++ I DI+ L SF   +   H     N  AH + + A+
Subjt:  SIFLEVESDALEVINALISSTEDISDLKNFTEQIKDIA-LKSF--GMEFHHCSRFLNTDAHCVVRKAM

A0A803QC75 Uncharacterized protein

1.1e-81

32.9

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MSCF+LP   C +++ + ANFWWG      + HW SW  +CK K  GG+GFR    FNQA+LAKQ+WRI   P+S+L +IL+ RYF + NFLEA +G++P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH
        SLTW+ I W R+L  KG RW+VG G+ I    DPWI       P        G    L+ DE+ QW   +++  FS +D E IL+ P     S+D +IWH
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH

Query:  PDKKGLFSVKSAYHLA--MDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIP
            GL++VKS YHLA  MDI   +S+S  DS      WK  W L + P+ K   W+ I D +P   +++K+ V  +  C  C++  E+  H ++ CK  
Subjt:  PDKKGLFSVKSAYHLA--MDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIP

Query:  REGWETFIPTTHKLFDLCRLS--WDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSS
        +  W      ++ +FD  RLS      DY   L    +  E+ +    +W +W  RNRI   ++   A    + +A     +  NY   Q   R  +L++
Subjt:  REGWETFIPTTHKLFDLCRLS--WDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSS

Query:  ---------------QI--------------QWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISD
                       QI              QW+ P+ N +K+N DA+      V G+G I+ DS G++V    ++   ++    +EA AL + L  +  
Subjt:  ---------------QI--------------QWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISD

Query:  TCNRRSIFLEVESDALEVINALISSTEDISDLKNFTEQIKDI-ALKSF--GMEFHHCSRFLNTDAHCVVRKAMDFHFASDLVSGHGICISREEGKSFWAP
             S+   VESDAL V+NAL +    IS   +F + I D+  L SF   +   H  R  N  AHC+ + A+    A                   W  
Subjt:  TCNRRSIFLEVESDALEVINALISSTEDISDLKNFTEQIKDI-ALKSF--GMEFHHCSRFLNTDAHCVVRKAMDFHFASDLVSGHGICISREEGKSFWAP

Query:  NLPPWIFPLLIGGRCKDCYS
         +PP I+ ++   R ++C S
Subjt:  NLPPWIFPLLIGGRCKDCYS

A0A803QEG9 Uncharacterized protein

8.1e-82

32.09

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        MSCF+LP   C +++ + ANFWWG      K HW SW  +CK K  GG+GFR    FNQA+LAKQ+WRI   PNS+L  +L+ +YF   +FLEA +G++P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH
        SLTW+ I WGR+L   G RW++G G+ +    DPW+    +  P        G  VA L+ ++ QW   +++  F  +D E IL  P     ++D++IWH
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWH

Query:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE
            G F+V+SAYHLA  +     +S S S      WK  W L I  + K   W+VI D +P   +++++ +  +  C  CK+  E+T H ++ CK  + 
Subjt:  PDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPRE

Query:  GWETFIPTTHKLFD-LCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLK---------------
         W +F    H  F+    +S    DY  +L    N  E+     I+W +W  RN++        AN L       ++ ++    K               
Subjt:  GWETFIPTTHKLFD-LCRLSWDPKDYWWWLEENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLK---------------

Query:  -----DQVPKRTGNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVE
              + P  T  LSS   W+ P  +C+K+N+DA+  +     G+G ++ D+ GS+       I  N+    +EAKAL   L   +    ++     +E
Subjt:  -----DQVPKRTGNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVE

Query:  SDALEVINALISSTEDISDLKNFTEQIKDI-ALKSF--GMEFHHCSRFLNTDAHCVVRKAM
        +DAL V+NAL +     S+   F++ I D+ +L SF   +   H  R  N  AH + + A+
Subjt:  SDALEVINALISSTEDISDLKNFTEQIKDI-ALKSF--GMEFHHCSRFLNTDAHCVVRKAM

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

2.2e-36

26.96

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRY----FKDGNFLEAPI
        MS   LP +I   +D+L   F WG    KKK H + W  +C  K+ GGLG R   + N+A+++K  WR+ +  NS+   +L+ +Y     +D  +L  P 
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRY----FKDGNFLEAPI

Query:  GNAPSLTWRSICWG-RDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQW---------KEDMVRLGFSRMDAED-ILN
        G+  S TWRSI  G RD+   G  W  G G+ I    D W+S K    P L  DN +       +  K+ W         K D      +R++    +L+
Subjt:  GNAPSLTWRSICWG-RDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQW---------KEDMVRLGFSRMDAED-ILN

Query:  TPTGSKESKDEIIWHPDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKL
          TG   ++D + W   + G FSV+SAY       +M +  +      AS +  LWK+ +  R KT  W V    + T+    ++ +  + +C  CK  +
Subjt:  TPTGSKESKDEIIWHPDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKL

Query:  ETTTHLIWECKIPREGWETFIPTTHKLFDLCRLSWDPKDYWWWLEENL----NTEELARS---AIIIWKVWDFR--NRIASNNQTVS-ANFLFQSIAQSI
        E+  H++ +C      W   +P         +  +  K  + WL +NL      E++  S   A+IIW  W +R  N    N +      F+ +   +  
Subjt:  ETTTHLIWECKIPREGWETFIPTTHKLFDLCRLSWDPKDYWWWLEENL----NTEELARS---AIIIWKVWDFR--NRIASNNQTVS-ANFLFQSIAQSI

Query:  EEWKNNYLKDQVPKRTGNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGS
             N L      R   +   I W +P     K+N+D + R   G+   G ++ D  G+
Subjt:  EEWKNNYLKDQVPKRTGNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGS

P93295 Uncharacterized mitochondrial protein AtMg00310

2.4e-30

42.34

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKE-SGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNA
        MSCF+L   +C ++      FWW     K+K  W++W+ +CK KE  GGLGFR +  FNQA+LAKQS+RI   P+++L ++LR RYF   + +E  +G  
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKE-SGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNA

Query:  PSLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWI
        PS  WRSI  GR+L  +G    +G G    +  D WI
Subjt:  PSLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWI

Arabidopsis top hits

e value

%identity

Alignment

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

7.9e-13

25.2

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Query:  CLFCKKKLETTTHLIWECKIPREGWE-TFIPTTHKLFDLCRLSWDPKDY---WWWLEENLNTEELARSAIII----WKVWDFRNRIASNNQTVSANFLFQ
        C+ C    ET  HL+++C   R  W  + IP   +        W    Y   +W L   +   +L +   ++    W++W  RN +    +   A  + +
Subjt:  CLFCKKKLETTTHLIWECKIPREGWE-TFIPTTHKLFDLCRLSWDPKDY---WWWLEENLNTEELARSAIII----WKVWDFRNRIASNNQTVSANFLFQ

Query:  SIAQSIEEWKNNYL---KDQVPKRTGNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEIS
           +  EEW        K   P+   NLS  +QW+ P     K N+DA+W+ +    G+GWI+ +  G ++  G + + +   +   E +AL   +  +S
Subjt:  SIAQSIEEWKNNYL---KDQVPKRTGNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEIS

Query:  DTCNRRSIFLEVESDALEVINALIS---------STEDISDLKNFTEQIK
            +R IF   ESDA  ++N L S         + EDI  L +  E++K
Subjt:  DTCNRRSIFLEVESDALEVINALIS---------STEDISDLKNFTEQIK

AT3G09510.1 Ribonuclease H-like superfamily protein

7.6e-32

24.69

Show/hide

Query:  LRGRYFKDGNFLEAPIGNAPSLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQ---WKEDMVRLGFSR
        ++ RYFKD + L+A +    S  W S+  G  L +KG R  +G G+ I I  D  I      RP   ++  K   +  L + K     W +  +     +
Subjt:  LRGRYFKDGNFLEAPIGNAPSLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQ---WKEDMVRLGFSR

Query:  MDAEDILNTPTGSKESKDEIIWHPDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPM
         D   I        +  D+IIW+ +  G ++V+S Y L          + +    +  +  ++W L I+P+ K   W+ +   + T   +  +G+ ++P 
Subjt:  MDAEDILNTPTGSKESKDEIIWHPDKKGLFSVKSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPM

Query:  CLFCKKKLETTTHLIWECKIPREGWETFIPTTHKLFD--LCRLSWDPKDYWWWLEENLN-----TEELARSAI-------IIWKVWDFRNRIASNNQTVS
        C  C ++ E+  H ++ C      W        +L D  L R      D+    EEN++      ++   S         +IW++W  RN +  N    S
Subjt:  CLFCKKKLETTTHLIWECKIPREGWETFIPTTHKLFD--LCRLSWDPKDYWWWLEENLN-----TEELARSAI-------IIWKVWDFRNRIASNNQTVS

Query:  ANFLFQSIAQSIEEWKN-NYLKDQVPKRTGNLS-SQIQWQNPKPNCWKINSDASWR-DKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLE
         +    S      +W N      + P  T  ++ ++I+W+NP     K N DA +   KL   G GWI+ +  G+ + +G  K+         E KALL 
Subjt:  ANFLFQSIAQSIEEWKN-NYLKDQVPKRTGNLS-SQIQWQNPKPNCWKINSDASWR-DKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLE

Query:  GLKEISDTCNRRSIFLEVESDALEVINALISSTEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFHFASDLVSGHG
         L++   T  R    + +E D   +IN LI+     S L N  E I   A K   ++F    R  N  AH + +    +   S   SG G
Subjt:  GLKEISDTCNRRSIFLEVESDALEVINALISSTEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFHFASDLVSGHG

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

3.9e-12

23.31

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNP---NSILYKILRGRYFKDGNFLEAPIG
        MS F+LP+    EID +C++F W       K   ++W ++C  K+ GGLG R +   N+       W I+ N    + +  KIL+ R    G F++  I 
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNP---NSILYKILRGRYFKDGNFLEAPIG

Query:  NAPSLTWRSICW---GRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILN--TPTGSKE
        N  + ++    W   GR +   G R  +  G          I+   +   A+V    +  R   LL                    ED++      G   
Subjt:  NAPSLTWRSICW---GRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILN--TPTGSKE

Query:  SKDEIIWHPDKKGLFSV-KSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHL
         +D + W    KG   + K  ++      K T A+  + K   + +K +W  +  P+     W  I++ + T   +L      +  C+ C   +ET  HL
Subjt:  SKDEIIWHPDKKGLFSV-KSAYHLAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHL

Query:  IWEC----KIPREGWETFIPTTHKLF
         + C    ++P     TF  T H L+
Subjt:  IWEC----KIPREGWETFIPTTHKLF

AT4G29090.1 Ribonuclease H-like superfamily protein

1.1e-59

26.7

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP
        M+CF LP  +C +I  + A+FWW   +  K  HW +W ++   K  GG+GF+ I AFN A+L KQ WR+   P S++ K+ + RYF   + L AP+G+ P
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAP

Query:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKG---------FRVALLLDEK-NQWKEDMVRLGFSRMDAEDILNTPTGS
        S  W+SI   +++ ++G R  VG+G+ I I R  W+  K  A  AL    +            +V+ L+DE   +W++D++ + F  ++ + I     G 
Subjt:  SLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKG---------FRVALLLDEK-NQWKEDMVRLGFSRMDAEDILNTPTGS

Query:  KESKDEIIWHPDKKGLFSVKSAYH-LAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTT
        +   D   W     G ++VKS Y  L   I+K +S  +        +++K+WK    P+ +   WK + + +P    +  + +     C+ C    ET  
Subjt:  KESKDEIIWHPDKKGLFSVKSAYH-LAMDIHKMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTT

Query:  HLIWECKIPREGWETF---IPTTHKLFDLCRLSWDPKDYWWWLEENLNTEELARSAII---IWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWK-NNY
        HL+++C   R  W      IP   +  D   ++     YW +   N N +    S ++   +W++W  RN +    +  +A  + +     +EEW+    
Subjt:  HLIWECKIPREGWETF---IPTTHKLFDLCRLSWDPKDYWWWLEENLNTEELARSAII---IWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWK-NNY

Query:  LKDQVPKRTGNLSSQIQWQNPKPNCW-KINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESD
         +    K   N SS  +W+ P P+ W K N+DA+W       G+GW++ + +G +   G + + K   +   E +A+   +  +S       IF   ESD
Subjt:  LKDQVPKRTGNLSSQIQWQNPKPNCW-KINSDASWRDKLGVGGLGWIVYDSEGSLVCFGMQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESD

Query:  ALEVINALISSTEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDF
        + +V+  ++++ E    LK   + ++ +  +   ++F    R  NT A  V R+++ F
Subjt:  ALEVINALISSTEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDF

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.7e-31

42.34

Show/hide

Query:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKE-SGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNA
        MSCF+L   +C ++      FWW     K+K  W++W+ +CK KE  GGLGFR +  FNQA+LAKQS+RI   P+++L ++LR RYF   + +E  +G  
Subjt:  MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKE-SGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNA

Query:  PSLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWI
        PS  WRSI  GR+L  +G    +G G    +  D WI
Subjt:  PSLTWRSICWGRDLFQKGFRWRVGSGKMISIDRDPWI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCTGCTTCAAGCTCCCTAACAACATATGTGCAGAGATCGATAGACTTTGCGCCAACTTTTGGTGGGGAGAAGCAAGAGGGAAGAAGAAGAGCCACTGGATGAGTTG
GAGGAACATGTGCAAGAGGAAAGAGTCGGGAGGCTTGGGATTTAGGCAAATCTCCGCTTTTAACCAAGCAATGCTGGCCAAGCAAAGCTGGAGGATAGCCCGAAACCCGA
ATAGCATTCTATATAAAATCTTGAGAGGTAGGTATTTTAAAGATGGAAACTTCTTGGAAGCCCCAATAGGAAATGCTCCCTCTCTGACTTGGAGAAGCATCTGTTGGGGT
CGTGACTTGTTCCAAAAAGGTTTTCGGTGGAGAGTGGGTAGCGGTAAAATGATTAGCATCGATAGAGATCCGTGGATTAGTAGGAAAGGAAATGCTAGACCTGCCCTTGT
CCAAGATAATCTCAAAGGTTTTCGTGTGGCCCTCCTGCTGGATGAGAAAAACCAATGGAAGGAGGATATGGTAAGGCTAGGCTTCTCTAGGATGGACGCTGAAGACATTC
TGAACACTCCCACGGGAAGTAAAGAGTCCAAAGACGAAATCATTTGGCACCCGGACAAAAAAGGCCTCTTCTCTGTGAAAAGTGCCTATCATCTAGCCATGGATATCCAC
AAAATGACTTCAGCCTCTCAATCTGACTCCAAGAAAACAGCCTCAGTGTGGAAGAAACTATGGAAGCTTAACATCCTCCCTAGATCTAAAACCTGCACCTGGAAAGTGAT
CCAAGACATCATCCCCACTAAGGCAAACGTGTTGAAAAAGGGAGTTGATTTAAATCCTATGTGCCTTTTTTGTAAAAAGAAGTTGGAAACCACTACTCATCTCATTTGGG
AGTGCAAAATTCCAAGAGAAGGGTGGGAAACCTTTATTCCTACAACTCATAAACTCTTTGATTTATGCAGATTAAGCTGGGACCCGAAGGATTATTGGTGGTGGCTGGAG
GAAAATCTAAACACAGAGGAGTTGGCGAGAAGTGCAATAATCATATGGAAGGTTTGGGATTTTCGCAACAGAATAGCATCCAACAACCAGACCGTCTCAGCAAACTTCCT
ATTTCAAAGCATTGCTCAAAGCATCGAGGAGTGGAAAAACAATTACCTCAAAGACCAAGTGCCGAAAAGAACTGGGAATCTCTCGAGTCAAATTCAATGGCAGAATCCAA
AGCCAAACTGCTGGAAGATTAACTCTGACGCGTCGTGGAGAGACAAACTAGGAGTTGGAGGGCTCGGATGGATTGTATATGACTCGGAAGGCTCCCTTGTCTGTTTCGGG
ATGCAGAAAATTTTCAAAAATTGGCCAATTAAAGTCCTAGAAGCCAAAGCTCTGCTCGAGGGTTTGAAAGAGATTAGCGATACCTGCAATCGCCGCTCAATCTTCCTTGA
GGTGGAATCTGACGCTCTCGAAGTGATCAACGCGCTGATCAGCTCTACGGAGGATATCTCGGACTTGAAGAACTTCACCGAACAGATCAAGGACATTGCTTTGAAGTCGT
TCGGTATGGAATTTCATCACTGTAGTAGATTTTTGAACACAGACGCGCACTGTGTTGTGAGGAAAGCCATGGATTTTCATTTTGCTTCTGATTTGGTTTCTGGCCATGGT
ATCTGTATCTCGCGGGAAGAGGGGAAATCTTTTTGGGCTCCAAATCTCCCCCCTTGGATTTTCCCCTTATTAATTGGGGGTAGGTGTAAAGACTGTTATTCGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSCFKLPNNICAEIDRLCANFWWGEARGKKKSHWMSWRNMCKRKESGGLGFRQISAFNQAMLAKQSWRIARNPNSILYKILRGRYFKDGNFLEAPIGNAPSLTWRSICWG
RDLFQKGFRWRVGSGKMISIDRDPWISRKGNARPALVQDNLKGFRVALLLDEKNQWKEDMVRLGFSRMDAEDILNTPTGSKESKDEIIWHPDKKGLFSVKSAYHLAMDIH
KMTSASQSDSKKTASVWKKLWKLNILPRSKTCTWKVIQDIIPTKANVLKKGVDLNPMCLFCKKKLETTTHLIWECKIPREGWETFIPTTHKLFDLCRLSWDPKDYWWWLE
ENLNTEELARSAIIIWKVWDFRNRIASNNQTVSANFLFQSIAQSIEEWKNNYLKDQVPKRTGNLSSQIQWQNPKPNCWKINSDASWRDKLGVGGLGWIVYDSEGSLVCFG
MQKIFKNWPIKVLEAKALLEGLKEISDTCNRRSIFLEVESDALEVINALISSTEDISDLKNFTEQIKDIALKSFGMEFHHCSRFLNTDAHCVVRKAMDFHFASDLVSGHG
ICISREEGKSFWAPNLPPWIFPLLIGGRCKDCYS

Lag0018163 (gene) of Sponge gourd (AG-4) v1 genome