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Lag0018167 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018167
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein BPS1, chloroplastic-like
Genome locationchr5:17877527..17877847
RNA-Seq ExpressionLag0018167
SyntenyLag0018167
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575710.1 UPF0496 protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2866.67Show/hide
Query:  MVLLLHSFNKLSSKLDNHHNCHACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYLN
        M+LLL +FNKL SKL + H  H CKAS SVS LQ  E +VSSCLNQ LLSS +L+LLSF WL QL           AKLV +LE+PVGKWGA LVDGYLN
Subjt:  MVLLLHSFNKLSSKLDNHHNCHACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYLN

Query:  YSLNLLNLFNSISFSLS
        YSLNLL+L NSISFSLS
Subjt:  YSLNLLNLFNSISFSLS

KAG6593278.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2866.95Show/hide
Query:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL
        M+LLL SFNK  SK  NHH+  H  +ASFSVS LQ F+ EVSSCLNQLLLSS +   LSF WLLQL           AKLVVDL+ PV KWGADLVDGYL
Subjt:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL

Query:  NYSLNLLNLFNSISFSLS
        NYSLNLL+L NS+SFSLS
Subjt:  NYSLNLLNLFNSISFSLS

KAG7025628.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2866.95Show/hide
Query:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL
        M+LLL SFNK  SK  NHH+  H  +ASFSVS LQ F+ EVSSCLNQLLLSS + + LSF WLLQL           AKLVVDL+ PV KWGADLVDGYL
Subjt:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL

Query:  NYSLNLLNLFNSISFSLS
        NYSLNLL+L NS+SFSLS
Subjt:  NYSLNLLNLFNSISFSLS

XP_022960422.1 protein BPS1, chloroplastic-like [Cucurbita moschata]3.3e-2866.95Show/hide
Query:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL
        M+LLL SFNK  SK  NHH+  H  +ASFSVS LQ F+ EVSSCLNQLLLSS +   LSF WLLQL           AKLVVDL+ PV KWGADLVDGYL
Subjt:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL

Query:  NYSLNLLNLFNSISFSLS
        NYSLNLL+L NS+SFSLS
Subjt:  NYSLNLLNLFNSISFSLS

XP_038896303.1 protein BPS1, chloroplastic-like [Benincasa hispida]8.1e-3572.88Show/hide
Query:  MVLLLHSFNKLSSKLDNHHNCHACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL------------AKLVVDLEYPVGKWGADLVDGYL
        M LLL +FNKL SKLDNHH+   CK+SFSVSRLQ FE +VSSCLNQLLLS+ +LK LSF+WLLQL            AKLVVDLEYPVGKWGADLVDGYL
Subjt:  MVLLLHSFNKLSSKLDNHHNCHACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL------------AKLVVDLEYPVGKWGADLVDGYL

Query:  NYSLNLLNLFNSISFSLS
        NYSLNLL+L NSISFSL+
Subjt:  NYSLNLLNLFNSISFSLS

TrEMBL top hitse value%identityAlignment
A0A0A0K882 Uncharacterized protein8.2e-2561.67Show/hide
Query:  MVLLLHSFNKLSSKLDNHH-NCHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL------------AKLVVDLEYPVGKWGADLVDG
        M L+L +FNK  SKLDN H N H  K ASFS+SRL  FE +VSSC N LLLS+   K LSF + LQL            AKLVVDLEYPVG+W ADLVDG
Subjt:  MVLLLHSFNKLSSKLDNHH-NCHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL------------AKLVVDLEYPVGKWGADLVDG

Query:  YLNYSLNLLNLFNSISFSLS
        Y+NY+LNLL+L NSISFSL+
Subjt:  YLNYSLNLLNLFNSISFSLS

A0A1S4E356 UPF0496 protein 4-like3.3e-2665Show/hide
Query:  MVLLLHSFNKLSSKLDNHH-NCHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL------------AKLVVDLEYPVGKWGADLVDG
        M LLL +FNK  SKLDN H N H  K ASFS+SRL  FE +VS+CLN LLLS+   K LSF +LLQL            AKLVVDLEYPVG+W ADLVDG
Subjt:  MVLLLHSFNKLSSKLDNHH-NCHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL------------AKLVVDLEYPVGKWGADLVDG

Query:  YLNYSLNLLNLFNSISFSLS
        YLNYSLNLL+L NSISFSL+
Subjt:  YLNYSLNLLNLFNSISFSLS

A0A5D3CEU0 UPF0496 protein 4-like3.3e-2665Show/hide
Query:  MVLLLHSFNKLSSKLDNHH-NCHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL------------AKLVVDLEYPVGKWGADLVDG
        M LLL +FNK  SKLDN H N H  K ASFS+SRL  FE +VS+CLN LLLS+   K LSF +LLQL            AKLVVDLEYPVG+W ADLVDG
Subjt:  MVLLLHSFNKLSSKLDNHH-NCHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL------------AKLVVDLEYPVGKWGADLVDG

Query:  YLNYSLNLLNLFNSISFSLS
        YLNYSLNLL+L NSISFSL+
Subjt:  YLNYSLNLLNLFNSISFSLS

A0A6J1H7D5 protein BPS1, chloroplastic-like1.6e-2866.95Show/hide
Query:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL
        M+LLL SFNK  SK  NHH+  H  +ASFSVS LQ F+ EVSSCLNQLLLSS +   LSF WLLQL           AKLVVDL+ PV KWGADLVDGYL
Subjt:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL

Query:  NYSLNLLNLFNSISFSLS
        NYSLNLL+L NS+SFSLS
Subjt:  NYSLNLLNLFNSISFSLS

A0A6J1KTC2 protein BPS1, chloroplastic-like3.0e-2764.41Show/hide
Query:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL
        M+LLL +FNK  SK  NHH+  H  +ASFSVS LQ F+ EVSSCLNQLLL S +   LSF WLLQL           +KLVVDL+ PV KWGADLVDGYL
Subjt:  MVLLLHSFNKLSSKLDNHHNC-HACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQL-----------AKLVVDLEYPVGKWGADLVDGYL

Query:  NYSLNLLNLFNSISFSLS
        NYSLNLL+L NS+SFSLS
Subjt:  NYSLNLLNLFNSISFSLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTTTTGCTTCATTCCTTCAACAAGCTCTCTTCCAAGCTCGACAATCACCACAACTGCCATGCATGTAAAGCTTCGTTCTCTGTTTCTCGTCTTCAGGTCTTCGA
GGTTGAAGTCTCGTCTTGCCTGAATCAACTCTTGCTGTCGAGTTTCAATTTGAAATTGTTGTCATTTCAATGGCTTCTTCAGCTTGCGAAATTGGTTGTTGATTTGGAGT
ACCCCGTCGGGAAATGGGGAGCCGATTTGGTTGATGGGTATTTGAATTACAGTCTTAACTTGCTCAATCTTTTCAATTCCATCAGTTTTTCTCTATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTTTTGCTTCATTCCTTCAACAAGCTCTCTTCCAAGCTCGACAATCACCACAACTGCCATGCATGTAAAGCTTCGTTCTCTGTTTCTCGTCTTCAGGTCTTCGA
GGTTGAAGTCTCGTCTTGCCTGAATCAACTCTTGCTGTCGAGTTTCAATTTGAAATTGTTGTCATTTCAATGGCTTCTTCAGCTTGCGAAATTGGTTGTTGATTTGGAGT
ACCCCGTCGGGAAATGGGGAGCCGATTTGGTTGATGGGTATTTGAATTACAGTCTTAACTTGCTCAATCTTTTCAATTCCATCAGTTTTTCTCTATCCTAA
Protein sequenceShow/hide protein sequence
MVLLLHSFNKLSSKLDNHHNCHACKASFSVSRLQVFEVEVSSCLNQLLLSSFNLKLLSFQWLLQLAKLVVDLEYPVGKWGADLVDGYLNYSLNLLNLFNSISFSLS