; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018168 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018168
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationchr5:17878812..17879273
RNA-Seq ExpressionLag0018168
SyntenyLag0018168
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF32473.1 GRP3S, putative [Ricinus communis]2.0e-1075.45Show/hide
Query:  MTSKILFLLLLGAFVCTTSGARKLT---PSFEEEKFFHRPRF-------GGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGG--GGGAGGGGGFGG
        M SK+  +LLLGAFVCT++ AR L     SFE+EKFF RPR        GGGGFGGGGGGG GGGGG GGG+  GFGGG+GGG GG  GGGAGGGGGFGG
Subjt:  MTSKILFLLLLGAFVCTTSGARKLT---PSFEEEKFFHRPRF-------GGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGG--GGGAGGGGGFGG

Query:  GGGGGLGGGSGFGGGA--GFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP
        GGGGGLGGGSGFGGGA  GFGGGAGAGGG+GGGAGGGGG G GGGGGLGGGAGGGFG G G GGGLP
Subjt:  GGGGGLGGGSGFGGGA--GFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP

KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]1.7e-1783.97Show/hide
Query:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGSGGGFGGGGGAGGGGGFGGGGGGGLGGG
        M SKI+FL+ LGAF+ +TSGARKL T SF++EKFFHRPRFGGGG GGGGGGGF  GGGGGLGGGSGGGFGGGSG G G GGGAGGGGGFGGGGGGG+GGG
Subjt:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGSGGGFGGGGGAGGGGGFGGGGGGGLGGG

Query:  SGFGGGAGFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP
        SGFGGGAGFGGG+G GGG+GGGAGGGGG G GGGGGLGGGAGGGFGGGAG GGG P
Subjt:  SGFGGGAGFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP

KAA0065825.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]4.2e-1681.88Show/hide
Query:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGS--GGGFGGGGGAGGGGGFGGGGGGGLG
        M SKI+FL+ LGAF+ TTSGARKL T SF++EKFFHRPR+GGGG GGGGGGGF  GGGGGLGGGSGGGFGGGS  GGG GGG G GGGGGFGGGGGGGLG
Subjt:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGS--GGGFGGGGGAGGGGGFGGGGGGGLG

Query:  GGSGFGGGAGFGGGAGAGGGIGGGAGGGGGGGF--GGGGGLGGGAGGGFGGGAGGGGGLP
        GGSGFGGGAGFGGG+G GGG+GGG G GGGGGF  GGGGGLGGGAGGGFG GAG GGG P
Subjt:  GGSGFGGGAGFGGGAGAGGGIGGGAGGGGGGGF--GGGGGLGGGAGGGFGGGAGGGGGLP

XP_002529919.2 glycine-rich protein 5 [Ricinus communis]2.0e-1075.45Show/hide
Query:  MTSKILFLLLLGAFVCTTSGARKLT---PSFEEEKFFHRPRF-------GGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGG--GGGAGGGGGFGG
        M SK+  +LLLGAFVCT++ AR L     SFE+EKFF RPR        GGGGFGGGGGGG GGGGG GGG+  GFGGG+GGG GG  GGGAGGGGGFGG
Subjt:  MTSKILFLLLLGAFVCTTSGARKLT---PSFEEEKFFHRPRF-------GGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGG--GGGAGGGGGFGG

Query:  GGGGGLGGGSGFGGGA--GFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP
        GGGGGLGGGSGFGGGA  GFGGGAGAGGG+GGGAGGGGG G GGGGGLGGGAGGGFG G G GGGLP
Subjt:  GGGGGLGGGSGFGGGA--GFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP

XP_011650511.1 glycine-rich cell wall structural protein-like [Cucumis sativus]1.0e-1482.28Show/hide
Query:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGS--GGGFGGGGGAGGGGGFGGGGGGGLG
        M SKI+FL+ LGAF+ +TSGARKL T SF++EKFF RPRFGGGG GGGGGGGF  GGGGGLGGGSGGGFGGGS  GGG GGG G GGGGGFGGGGGGGLG
Subjt:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGS--GGGFGGGGGAGGGGGFGGGGGGGLG

Query:  GGSGFGGGAGFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP
        GGSGFGGGAGFGGG+G G G GGGAGGGGG G GGGGGLGGGAGGGFGGGAG GGG P
Subjt:  GGSGFGGGAGFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP

TrEMBL top hitse value%identityAlignment
A0A5A7VJD1 Glycine-rich cell wall structural protein-like2.0e-1681.88Show/hide
Query:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGS--GGGFGGGGGAGGGGGFGGGGGGGLG
        M SKI+FL+ LGAF+ TTSGARKL T SF++EKFFHRPR+GGGG GGGGGGGF  GGGGGLGGGSGGGFGGGS  GGG GGG G GGGGGFGGGGGGGLG
Subjt:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGS--GGGFGGGGGAGGGGGFGGGGGGGLG

Query:  GGSGFGGGAGFGGGAGAGGGIGGGAGGGGGGGF--GGGGGLGGGAGGGFGGGAGGGGGLP
        GGSGFGGGAGFGGG+G GGG+GGG G GGGGGF  GGGGGLGGGAGGGFG GAG GGG P
Subjt:  GGSGFGGGAGFGGGAGAGGGIGGGAGGGGGGGF--GGGGGLGGGAGGGFGGGAGGGGGLP

A0A5D3BB90 Glycine-rich cell wall structural protein-like8.3e-1883.97Show/hide
Query:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGSGGGFGGGGGAGGGGGFGGGGGGGLGGG
        M SKI+FL+ LGAF+ +TSGARKL T SF++EKFFHRPRFGGGG GGGGGGGF  GGGGGLGGGSGGGFGGGSG G G GGGAGGGGGFGGGGGGG+GGG
Subjt:  MTSKILFLLLLGAFVCTTSGARKL-TPSFEEEKFFHRPRFGGGGFGGGGGGGF--GGGGGLGGGSGGGFGGGSGGGFGGGGGAGGGGGFGGGGGGGLGGG

Query:  SGFGGGAGFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP
        SGFGGGAGFGGG+G GGG+GGGAGGGGG G GGGGGLGGGAGGGFGGGAG GGG P
Subjt:  SGFGGGAGFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP

A0A6J1AP12 glycine-rich protein 239.2e-0977.5Show/hide
Query:  TSKILFLLLLGAFVCTTSGARKLTPSFEEEK-FFHRPRFGGGGFGGGGGGGFGGGGGLGGGSGG--GFGG--GSGGGFGGGGGAGGGGGFGGGGGGGLGG
        +SK+LF+L LGA VC +S ARKLT  FE+EK  FHRPRF GGG GGGGGGG GGGGGLG G+GG  GFGG  G+GGG GGGGG GGGGG G GGGGGLGG
Subjt:  TSKILFLLLLGAFVCTTSGARKLTPSFEEEK-FFHRPRFGGGGFGGGGGGGFGGGGGLGGGSGG--GFGG--GSGGGFGGGGGAGGGGGFGGGGGGGLGG

Query:  GSGFGGGA--GFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGG--GAGGGFGGGAGGGGGL
        G GFGGGA  GFGGGAGAGGG+GGG G GGGGGFGGGGGLGG  GAGGGFGGGAG GGGL
Subjt:  GSGFGGGA--GFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGG--GAGGGFGGGAGGGGGL

A0A6P5WPX9 glycine-rich protein 23-like9.2e-0976.47Show/hide
Query:  SKILFLLLLGAFVCTTSGARKLTPSFEEEK-FFHRPRFGGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGGGG--GAGGGGGFGGGGGGGLGGGSG
        SK+L +L LGA VCTTS ARKLT  FE+EK   HRPRF GGG GGGGGGGFGGGGG G G G GFGGG+GGG GGGG  G GGGGGFGGGGGGGLGGG+G
Subjt:  SKILFLLLLGAFVCTTSGARKLTPSFEEEK-FFHRPRFGGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGGGG--GAGGGGGFGGGGGGGLGGGSG

Query:  FGGGAGFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGL
        FGGGA    G G GGG+GGG G GGGGGFGGGGG GGG GGGFGGGAG GGGL
Subjt:  FGGGAGFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGL

B9SVA0 GRP3S, putative9.8e-1175.45Show/hide
Query:  MTSKILFLLLLGAFVCTTSGARKLT---PSFEEEKFFHRPRF-------GGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGG--GGGAGGGGGFGG
        M SK+  +LLLGAFVCT++ AR L     SFE+EKFF RPR        GGGGFGGGGGGG GGGGG GGG+  GFGGG+GGG GG  GGGAGGGGGFGG
Subjt:  MTSKILFLLLLGAFVCTTSGARKLT---PSFEEEKFFHRPRF-------GGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGG--GGGAGGGGGFGG

Query:  GGGGGLGGGSGFGGGA--GFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP
        GGGGGLGGGSGFGGGA  GFGGGAGAGGG+GGGAGGGGG G GGGGGLGGGAGGGFG G G GGGLP
Subjt:  GGGGGLGGGSGFGGGA--GFGGGAGAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCAAGATTCTCTTTCTTCTGCTTCTTGGTGCCTTTGTCTGCACCACTTCTGGGGCTCGCAAGCTGACTCCCTCTTTTGAAGAGGAGAAGTTCTTCCACCGTCC
TAGATTTGGCGGCGGAGGATTCGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGTGGAGGGCTAGGTGGGGGTTCTGGAGGTGGTTTTGGTGGTGGTTCGGGAGGTGGTT
TTGGTGGTGGTGGCGGCGCTGGAGGAGGAGGAGGGTTTGGTGGAGGAGGAGGTGGTGGACTAGGTGGAGGGAGTGGTTTTGGAGGCGGAGCTGGATTCGGAGGAGGGGCC
GGTGCAGGAGGAGGAATTGGTGGTGGAGCTGGTGGTGGAGGAGGTGGAGGGTTCGGTGGCGGTGGGGGACTTGGGGGTGGAGCAGGCGGAGGGTTCGGCGGAGGCGCCGG
TGGCGGAGGTGGTCTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCAAGATTCTCTTTCTTCTGCTTCTTGGTGCCTTTGTCTGCACCACTTCTGGGGCTCGCAAGCTGACTCCCTCTTTTGAAGAGGAGAAGTTCTTCCACCGTCC
TAGATTTGGCGGCGGAGGATTCGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGTGGAGGGCTAGGTGGGGGTTCTGGAGGTGGTTTTGGTGGTGGTTCGGGAGGTGGTT
TTGGTGGTGGTGGCGGCGCTGGAGGAGGAGGAGGGTTTGGTGGAGGAGGAGGTGGTGGACTAGGTGGAGGGAGTGGTTTTGGAGGCGGAGCTGGATTCGGAGGAGGGGCC
GGTGCAGGAGGAGGAATTGGTGGTGGAGCTGGTGGTGGAGGAGGTGGAGGGTTCGGTGGCGGTGGGGGACTTGGGGGTGGAGCAGGCGGAGGGTTCGGCGGAGGCGCCGG
TGGCGGAGGTGGTCTTCCTTGA
Protein sequenceShow/hide protein sequence
MTSKILFLLLLGAFVCTTSGARKLTPSFEEEKFFHRPRFGGGGFGGGGGGGFGGGGGLGGGSGGGFGGGSGGGFGGGGGAGGGGGFGGGGGGGLGGGSGFGGGAGFGGGA
GAGGGIGGGAGGGGGGGFGGGGGLGGGAGGGFGGGAGGGGGLP