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Lag0018169 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018169
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L11
Genome locationchr5:17904253..17910030
RNA-Seq ExpressionLag0018169
SyntenyLag0018169
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO61018.1 Ribosomal protein L5 [Corchorus olitorius]8.7e-1286.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK QQ+ S
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

OMO83875.1 Ribosomal protein L5 [Corchorus capsularis]8.7e-1286.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK QQ+ S
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

XP_022012706.1 60S ribosomal protein L11 [Helianthus annuus]1.1e-1186.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCK+R+GIQH+VT EDAMKWFQVKYEGVILNK QQI S
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

XP_039052952.1 60S ribosomal protein L11-1-like [Hibiscus syriacus]1.5e-1186.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK Q I+S
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

XP_039125828.1 60S ribosomal protein L11-like [Dioscorea cayenensis subsp. rotundata]1.1e-1186.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK Q +AS
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

TrEMBL top hitse value%identityAlignment
A0A1R3GSB6 Ribosomal protein L54.2e-1286.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK QQ+ S
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

A0A1R3IMR9 Ribosomal protein L54.2e-1286.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK QQ+ S
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

A0A251SBG7 Putative ribosomal protein L55.5e-1286.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCK+R+GIQH+VT EDAMKWFQVKYEGVILNK QQI S
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

A0A2P5AX49 Ribosomal protein9.4e-1286.05Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS
        VGRRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK Q I S
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS

A0A5A7U1I5 60S ribosomal protein L11 isoform X19.4e-1290.24Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        VGRRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK QQI
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L118.2e-1387.18Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQ
        V RRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK Q
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQ

P42794 60S ribosomal protein L11-22.4e-1280.49Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        V RRRRCK+R+GIQH+VT +DAMKWFQVKYEGVILNK Q I
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI

P42795 60S ribosomal protein L11-12.4e-1280.49Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        V RRRRCK+R+GIQH+VT +DAMKWFQVKYEGVILNK Q I
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI

P46287 60S ribosomal protein L116.3e-1382.93Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        VGRRRRCK+R+GIQH+VT +DAMKWFQVKYEGVILNK Q I
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI

Q0DK10 60S ribosomal protein L118.2e-1387.18Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQ
        V RRRRCKSR+GIQH+VT EDAMKWFQVKYEGVILNK Q
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQ

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A1.7e-1380.49Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        V RRRRCK+R+GIQH+VT +DAMKWFQVKYEGVILNK Q I
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI

AT3G58700.1 Ribosomal L5P family protein1.7e-1380.49Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        V RRRRCK+R+GIQH+VT +DAMKWFQVKYEGVILNK Q I
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI

AT4G18730.1 ribosomal protein L16B1.7e-1380.49Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        V RRRRCK+R+GIQH+VT +DAMKWFQVKYEGVILNK Q I
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI

AT5G45775.1 Ribosomal L5P family protein1.7e-1380.49Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        V RRRRCK+R+GIQH+VT +DAMKWFQVKYEGVILNK Q I
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI

AT5G45775.2 Ribosomal L5P family protein1.7e-1380.49Show/hide
Query:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI
        V RRRRCK+R+GIQH+VT +DAMKWFQVKYEGVILNK Q I
Subjt:  VGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTTGGGAGAAGCTAAGGTTTGTTCTTCGAATCCAAATCGTTAGGAACGGCGTGGAATTCATTTTGTCTAAGAAACTGTTTCCTGAGACACCTCAAGAAGTTGA
GGACATGAGACGAATGCCCTATGCGATAGGGATTGTCACCGCATCAGCACCACCATGCCACCGGAGATTGTGTCCAACCACCGTCGCACCTCAGCCACCCACACACGTTG
CGAAAAGTGCGAACACCCCTATAACACCCTCTTCCTCCTTCTCGATCACGATCGGTCGTCTCCCCCTTCTCCAGCATCTCTCTTCTCTACCTGAGCGCGCCGTCATCGAT
CGAACAAGCAACCACCATCGCGCCTCCGTCTGCCCAATTGTCGTCGTGCGTCTCTCTCCCTCCCCTCTCGAGTCAACTCTGCACTTAGTGCTCAAGCTTCTAGACAGTAC
TATTGAGTCATTTTTAATGTCATTGGATAGGCAGTACAGTGAGGATAAGATAATCTGCTACAAAGAAAATGTTGGGCGTCGCAGGAGGTGCAAGTCTCGCATCGGGATCC
AACATAAAGTCACAATGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAAGGTGTGATTCTTAACAAGTTGCAGCAAATCGCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTTGGGAGAAGCTAAGGTTTGTTCTTCGAATCCAAATCGTTAGGAACGGCGTGGAATTCATTTTGTCTAAGAAACTGTTTCCTGAGACACCTCAAGAAGTTGA
GGACATGAGACGAATGCCCTATGCGATAGGGATTGTCACCGCATCAGCACCACCATGCCACCGGAGATTGTGTCCAACCACCGTCGCACCTCAGCCACCCACACACGTTG
CGAAAAGTGCGAACACCCCTATAACACCCTCTTCCTCCTTCTCGATCACGATCGGTCGTCTCCCCCTTCTCCAGCATCTCTCTTCTCTACCTGAGCGCGCCGTCATCGAT
CGAACAAGCAACCACCATCGCGCCTCCGTCTGCCCAATTGTCGTCGTGCGTCTCTCTCCCTCCCCTCTCGAGTCAACTCTGCACTTAGTGCTCAAGCTTCTAGACAGTAC
TATTGAGTCATTTTTAATGTCATTGGATAGGCAGTACAGTGAGGATAAGATAATCTGCTACAAAGAAAATGTTGGGCGTCGCAGGAGGTGCAAGTCTCGCATCGGGATCC
AACATAAAGTCACAATGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAAGGTGTGATTCTTAACAAGTTGCAGCAAATCGCTAGTTAA
Protein sequenceShow/hide protein sequence
MNIWEKLRFVLRIQIVRNGVEFILSKKLFPETPQEVEDMRRMPYAIGIVTASAPPCHRRLCPTTVAPQPPTHVAKSANTPITPSSSFSITIGRLPLLQHLSSLPERAVID
RTSNHHRASVCPIVVVRLSPSPLESTLHLVLKLLDSTIESFLMSLDRQYSEDKIICYKENVGRRRRCKSRIGIQHKVTMEDAMKWFQVKYEGVILNKLQQIAS