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Lag0018172 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018172
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description4-hydroxy-tetrahydrodipicolinate synthase
Genome locationchr5:17994812..18000582
RNA-Seq ExpressionLag0018172
SyntenyLag0018172
Gene Ontology termsGO:0009089 - lysine biosynthetic process via diaminopimelate (biological process)
GO:0019877 - diaminopimelate biosynthetic process (biological process)
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase (molecular function)
InterPro domainsIPR002220 - DapA-like
IPR013785 - Aldolase-type TIM barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582569.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3391.14Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+ VIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

KAG8475065.1 hypothetical protein CXB51_031830 [Gossypium anomalum]1.9e-3386.59Show/hide
Query:  LSLTSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        LS TS++DIK+LRL+TAIKTPYLPDGRFD+EAYD LVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGGSVK+
Subjt:  LSLTSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

XP_022147065.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Momordica charantia]2.2e-3492.41Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

XP_023528690.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-3391.14Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+ VIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

XP_038898920.1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Benincasa hispida]6.5e-3492.41Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

TrEMBL top hitse value%identityAlignment
A0A314YPG9 4-hydroxy-tetrahydrodipicolinate synthase1.2e-3387.34Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TS DDIKSLRL+TAIKTPYLPDGRFD+EAYDALVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHT+NC+GGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

A0A6J1CZ39 4-hydroxy-tetrahydrodipicolinate synthase1.1e-3492.41Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

A0A6J1E8W7 4-hydroxy-tetrahydrodipicolinate synthase9.1e-3491.14Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+ VIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

A0A6J1IVZ1 4-hydroxy-tetrahydrodipicolinate synthase9.1e-3491.14Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+ VIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

M5X0A9 4-hydroxy-tetrahydrodipicolinate synthase1.2e-3387.34Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TS DDIKSLRL+TAIKTPYLPDGRFD+EAYDALVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHT+NC+GGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

SwissProt top hitse value%identityAlignment
P24846 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic2.2e-3278.48Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TS D IKSLRL+TA+KTPYLPDGRFD+EAYD+L+N QI  GA+GVIVGGT GEG LMSWDEHIMLIGHTVNCFG ++K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

Q39535 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic7.4e-3379.75Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        TS DDI SLRL+TA+KTPYLPDGRFD+EAYD+L+N QIE GA+GVIVGGT GEG LMSWDEHIMLIGHTVNCFG  +K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

Q42948 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic1.2e-3587.34Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        T ADDIK+LRL+TAIKTPYLPDGRFD+EAYD LVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

Q9FVC8 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic1.4e-3483.54Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        T+ DDIK+LR++TAIKTPYLPDGRFD+EAYD LVN QI+NGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

Q9LZX6 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic5.2e-3482.28Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        T+ DDI+SLR++TAIKTPYLPDGRFD++AYD LVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGG +K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

Arabidopsis top hitse value%identityAlignment
AT2G45440.1 dihydrodipicolinate synthase9.6e-3683.54Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        T+ DDIK+LR++TAIKTPYLPDGRFD+EAYD LVN QI+NGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGGS+K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

AT3G60880.1 dihydrodipicolinate synthase 13.7e-3582.28Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        T+ DDI+SLR++TAIKTPYLPDGRFD++AYD LVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGG +K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL

AT3G60880.2 dihydrodipicolinate synthase 13.7e-3582.28Show/hide
Query:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL
        T+ DDI+SLR++TAIKTPYLPDGRFD++AYD LVN QIENGA+GVIVGGT GEGQLMSWDEHIMLIGHTVNCFGG +K+
Subjt:  TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAACAACTATTGGATGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAACCACGCCTCACTTTCCTTCTCTCC
CTCGATTTCTACTGTTAAGGGGAAGTTCGCTGCTCAGGTCACGTACAACGCCGCCCGTTGCCGAATCTCGCCGTCGAAGGTCGTCGCCCACTATCGAATCTCTCCATTGA
AGGTCGCGCCGAAGGTCAGTTCGAATTCGCCGCCTGTTTCCCGTCCCCGCCGCCCATCCACGTTGCTTAGTTCGCCGCCGTCCGTCCACGTCGCTCAGATTCCAACTTTG
ACCAAGGAGACTGGTCCTTCAAAGGATGAGTTAGAGCTAGCTAAAGAAATGGAGAGATCTTCCTCAAGGAAGAAGGCGCCTGATCTATATAAAGGCAATCTTTCTAAATC
GGAAGCAACTTCACGAATTGGGATGAAAGGGGAAAAAATTGAGGGCTTAGCATCAAATATGAATGGAAATACACAGACAGTAGCCATCAAGACTTTCCTCCATTGGACAA
AGGATGTCGTAGGGATTGATTCTGAGTCACCAAATCCATTTGATAAATGTGACCTCTTTCATCAAAGTGAAGGAATCCGATGGTTCCTCTCCCTGACATCAGCAGATGAT
ATCAAGTCTCTTAGACTTGTAACTGCCATTAAAACACCATATCTTCCCGATGGTAGATTTGATATAGAAGCTTATGATGCCTTGGTGAACTGTCAGATTGAAAATGGAGC
TAAAGGTGTGATTGTGGGTGGCACAATTGGTGAAGGTCAGTTGATGAGCTGGGATGAACACATAATGCTTATTGGTCACACTGTCAACTGTTTTGGTGGATCAGTCAAGC
TTGGATGCATGAATGGTTTCGACAAGGCTCCCCCTTTTTTGTATGAAAATGTGAAGAACGTAGTGACGTGTCCCCACGTCCCTACCTATCGCTTACACCGGCGTGTAGAC
GTCACTGAAGATGACTTTCAGCAACGTCTACAGTATGTGGTGATGTTGAATAAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGCAACTTTCTACTG
CATCGACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCCCTGTCTTCGGTCGCATCAAGCCTCCAACTACTCATTTGGTGTCCACCTTCACTCGACCTT
TAGCTTTCCAAAGGGAGGGACCTCCTCCCTCCGTTCCGACGCCGGAAAACGGAGGAGGGAGCTCCCTCCTCCTTTCTCTTTCATTTAAAAAAAAAGTTGTTGAAACTTTG
AGGAAGGAGAGGAAGAAGAGAAGAAGAAGGAAGAAAGAAAGAAAGAAAGAAAAACAAATTTCGCCGCCGACGAGCGGCGGCCGGCGGCTGCCGGCGACGACATGTGGGTG
GCGCGACCATCGGAGGTTTGAAGAAGAAGATGGAGGGGATGAGGGAAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAACAACTATTGGATGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAACCACGCCTCACTTTCCTTCTCTCC
CTCGATTTCTACTGTTAAGGGGAAGTTCGCTGCTCAGGTCACGTACAACGCCGCCCGTTGCCGAATCTCGCCGTCGAAGGTCGTCGCCCACTATCGAATCTCTCCATTGA
AGGTCGCGCCGAAGGTCAGTTCGAATTCGCCGCCTGTTTCCCGTCCCCGCCGCCCATCCACGTTGCTTAGTTCGCCGCCGTCCGTCCACGTCGCTCAGATTCCAACTTTG
ACCAAGGAGACTGGTCCTTCAAAGGATGAGTTAGAGCTAGCTAAAGAAATGGAGAGATCTTCCTCAAGGAAGAAGGCGCCTGATCTATATAAAGGCAATCTTTCTAAATC
GGAAGCAACTTCACGAATTGGGATGAAAGGGGAAAAAATTGAGGGCTTAGCATCAAATATGAATGGAAATACACAGACAGTAGCCATCAAGACTTTCCTCCATTGGACAA
AGGATGTCGTAGGGATTGATTCTGAGTCACCAAATCCATTTGATAAATGTGACCTCTTTCATCAAAGTGAAGGAATCCGATGGTTCCTCTCCCTGACATCAGCAGATGAT
ATCAAGTCTCTTAGACTTGTAACTGCCATTAAAACACCATATCTTCCCGATGGTAGATTTGATATAGAAGCTTATGATGCCTTGGTGAACTGTCAGATTGAAAATGGAGC
TAAAGGTGTGATTGTGGGTGGCACAATTGGTGAAGGTCAGTTGATGAGCTGGGATGAACACATAATGCTTATTGGTCACACTGTCAACTGTTTTGGTGGATCAGTCAAGC
TTGGATGCATGAATGGTTTCGACAAGGCTCCCCCTTTTTTGTATGAAAATGTGAAGAACGTAGTGACGTGTCCCCACGTCCCTACCTATCGCTTACACCGGCGTGTAGAC
GTCACTGAAGATGACTTTCAGCAACGTCTACAGTATGTGGTGATGTTGAATAAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGCAACTTTCTACTG
CATCGACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCCCTGTCTTCGGTCGCATCAAGCCTCCAACTACTCATTTGGTGTCCACCTTCACTCGACCTT
TAGCTTTCCAAAGGGAGGGACCTCCTCCCTCCGTTCCGACGCCGGAAAACGGAGGAGGGAGCTCCCTCCTCCTTTCTCTTTCATTTAAAAAAAAAGTTGTTGAAACTTTG
AGGAAGGAGAGGAAGAAGAGAAGAAGAAGGAAGAAAGAAAGAAAGAAAGAAAAACAAATTTCGCCGCCGACGAGCGGCGGCCGGCGGCTGCCGGCGACGACATGTGGGTG
GCGCGACCATCGGAGGTTTGAAGAAGAAGATGGAGGGGATGAGGGAAGAGGATGA
Protein sequenceShow/hide protein sequence
MLEQLLDAQLIELPKCKRPEEMEKVDDLNHASLSFSPSISTVKGKFAAQVTYNAARCRISPSKVVAHYRISPLKVAPKVSSNSPPVSRPRRPSTLLSSPPSVHVAQIPTL
TKETGPSKDELELAKEMERSSSRKKAPDLYKGNLSKSEATSRIGMKGEKIEGLASNMNGNTQTVAIKTFLHWTKDVVGIDSESPNPFDKCDLFHQSEGIRWFLSLTSADD
IKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKLGCMNGFDKAPPFLYENVKNVVTCPHVPTYRLHRRVD
VTEDDFQQRLQYVVMLNKFFSKTFHKKEKGNFATFYCIDVEEVDNSEKGEQRTPVFGRIKPPTTHLVSTFTRPLAFQREGPPPSVPTPENGGGSSLLLSLSFKKKVVETL
RKERKKRRRRKKERKKEKQISPPTSGGRRLPATTCGWRDHRRFEEEDGGDEGRG