; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018177 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018177
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr5:18125780..18127253
RNA-Seq ExpressionLag0018177
SyntenyLag0018177
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]3.1e-0729.89Show/hide
Query:  QEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD-------FRMPVKPTLRWASLGSACC----------------RQHTTPR---
        + P  VNA++V+EFYAN+   N   + VRG  + ++P AI   F LQD       F            L   C                 R+   PR   
Subjt:  QEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD-------FRMPVKPTLRWASLGSACC----------------RQHTTPR---

Query:  --------YLGTGY--------CLLLPFF--SMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRES
                 + T Y         LLL     S  IDVG+II  ++ DC  KK   L FPN IT LC ++ ++E+
Subjt:  --------YLGTGY--------CLLLPFF--SMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRES

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.8e-0729.67Show/hide
Query:  QEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQ-------DFRMPVK-------------PTLRW------------------ASL
        + P PVNA IV+EFY+N+   N   V+VRG+ ++++P AIN  F LQ        F   V              P  RW                    L
Subjt:  QEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQ-------DFRMPVK-------------PTLRW------------------ASL

Query:  GSACCRQHTTPRYLGTGY----CLLLP--FFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCG
         +   +    P    T       LLL       +ID+GKII      C K++   L FPN IT LC ++ +RE +   I  G
Subjt:  GSACCRQHTTPRYLGTGY----CLLLP--FFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.5e-1229.86Show/hide
Query:  PEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD--------------------FRMPVKPTLRW---ASLGSACCRQHTTP------
        PE     +VREFYANL    +  V VRGV V WS EAIN +F L D                              W   A     C R   TP      
Subjt:  PEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD--------------------FRMPVKPTLRW---ASLGSACCRQHTTP------

Query:  -----RYLGTGY--------CLLL--PFFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRS----LRESLTHLIW--CGFTYQEVRQGGLVYG
             R L T +         LLL       SI+VG++I SEI  C  +K G LFFP+ IT LC        + E   H            + Q G    
Subjt:  -----RYLGTGY--------CLLL--PFFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRS----LRESLTHLIW--CGFTYQEVRQGGLVYG

Query:  VNQ-----------------ILEQLSVLTSR--------------LEFAERQAQTYWTYAKRRDDALRGALQSNFSTP
          Q                 IL+QL  L  R              L+   +Q Q +W Y+K RD AL+ ALQ+NF+ P
Subjt:  VNQ-----------------ILEQLSVLTSR--------------LEFAERQAQTYWTYAKRRDDALRGALQSNFSTP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.7e-1331.78Show/hide
Query:  IVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD--------FRMPVKPTL------------RW---ASLGSACCRQHTTP-----------RY
        +VREFYANL    +  + VRGV V WS EAIN +F L D             +P L             W   A     C R   TP           R 
Subjt:  IVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD--------FRMPVKPTL------------RW---ASLGSACCRQHTTP-----------RY

Query:  LGTGY--------CLLLPFF--SMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCG----FTYQEVRQGGLVYGVNQ------
        L T +         LLL       SI+VG++I SEI  C  +K G LFFP+ IT LC       +   L   G         + Q G      Q      
Subjt:  LGTGY--------CLLLPFF--SMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCG----FTYQEVRQGGLVYGVNQ------

Query:  -----------ILEQLSVLTSRL---EFAERQAQTYWTYAKRRDDALRGALQSNFSTP
                   +L+QL  L  RL   E   +Q Q +W Y+K RD AL+ ALQ+NF+ P
Subjt:  -----------ILEQLSVLTSRL---EFAERQAQTYWTYAKRRDDALRGALQSNFSTP

TYH01644.1 hypothetical protein ES288_A09G075900v1 [Gossypium darwinii]3.7e-0827.78Show/hide
Query:  KGIAEASGEIEEPRAPFIRFVNDLARAKYQEPEPV-NANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQDFR----MPVKPTLRW-------
        KG    S ++     P  + +N L   ++ +   V +  +V+EFYA+L  ++  EVIVR   V  + ++IN++F+L D       P+   + W       
Subjt:  KGIAEASGEIEEPRAPFIRFVNDLARAKYQEPEPV-NANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQDFR----MPVKPTLRW-------

Query:  ---ASLGS----------ACCRQHTTP------RYLGTGYCLLLPFFSMSID---------------VGKIISSEIVDCWKKKVGKLFFPNAITMLCSRR
            +LGS          +C R++  P       ++   + L+   F++SI+               VGKII  EI DC KK+ G  +FP+ IT LC R 
Subjt:  ---ASLGS----------ACCRQHTTP------RYLGTGYCLLLPFFSMSID---------------VGKIISSEIVDCWKKKVGKLFFPNAITMLCSRR

Query:  SLRESLTHLIWCGFTY
         L+ + T+L  C   Y
Subjt:  SLRESLTHLIWCGFTY

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)2.7e-1229.86Show/hide
Query:  PEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD--------------------FRMPVKPTLRW---ASLGSACCRQHTTP------
        PE     +VREFYANL    +  V VRGV V WS EAIN +F L D                              W   A     C R   TP      
Subjt:  PEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD--------------------FRMPVKPTLRW---ASLGSACCRQHTTP------

Query:  -----RYLGTGY--------CLLL--PFFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRS----LRESLTHLIW--CGFTYQEVRQGGLVYG
             R L T +         LLL       SI+VG++I SEI  C  +K G LFFP+ IT LC        + E   H            + Q G    
Subjt:  -----RYLGTGY--------CLLL--PFFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRS----LRESLTHLIW--CGFTYQEVRQGGLVYG

Query:  VNQ-----------------ILEQLSVLTSR--------------LEFAERQAQTYWTYAKRRDDALRGALQSNFSTP
          Q                 IL+QL  L  R              L+   +Q Q +W Y+K RD AL+ ALQ+NF+ P
Subjt:  VNQ-----------------ILEQLSVLTSR--------------LEFAERQAQTYWTYAKRRDDALRGALQSNFSTP

A0A2P5DXM3 Uncharacterized protein8.3e-1431.78Show/hide
Query:  IVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD--------FRMPVKPTL------------RW---ASLGSACCRQHTTP-----------RY
        +VREFYANL    +  + VRGV V WS EAIN +F L D             +P L             W   A     C R   TP           R 
Subjt:  IVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD--------FRMPVKPTL------------RW---ASLGSACCRQHTTP-----------RY

Query:  LGTGY--------CLLLPFF--SMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCG----FTYQEVRQGGLVYGVNQ------
        L T +         LLL       SI+VG++I SEI  C  +K G LFFP+ IT LC       +   L   G         + Q G      Q      
Subjt:  LGTGY--------CLLLPFF--SMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCG----FTYQEVRQGGLVYGVNQ------

Query:  -----------ILEQLSVLTSRL---EFAERQAQTYWTYAKRRDDALRGALQSNFSTP
                   +L+QL  L  RL   E   +Q Q +W Y+K RD AL+ ALQ+NF+ P
Subjt:  -----------ILEQLSVLTSRL---EFAERQAQTYWTYAKRRDDALRGALQSNFSTP

A0A5D2F6I2 Uncharacterized protein1.8e-0827.78Show/hide
Query:  KGIAEASGEIEEPRAPFIRFVNDLARAKYQEPEPV-NANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQDFR----MPVKPTLRW-------
        KG    S ++     P  + +N L   ++ +   V +  +V+EFYA+L  ++  EVIVR   V  + ++IN++F+L D       P+   + W       
Subjt:  KGIAEASGEIEEPRAPFIRFVNDLARAKYQEPEPV-NANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQDFR----MPVKPTLRW-------

Query:  ---ASLGS----------ACCRQHTTP------RYLGTGYCLLLPFFSMSID---------------VGKIISSEIVDCWKKKVGKLFFPNAITMLCSRR
            +LGS          +C R++  P       ++   + L+   F++SI+               VGKII  EI DC KK+ G  +FP+ IT LC R 
Subjt:  ---ASLGS----------ACCRQHTTP------RYLGTGYCLLLPFFSMSID---------------VGKIISSEIVDCWKKKVGKLFFPNAITMLCSRR

Query:  SLRESLTHLIWCGFTY
         L+ + T+L  C   Y
Subjt:  SLRESLTHLIWCGFTY

A0A6A2YMQ9 Uncharacterized protein1.5e-0729.89Show/hide
Query:  QEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD-------FRMPVKPTLRWASLGSACC----------------RQHTTPR---
        + P  VNA++V+EFYAN+   N   + VRG  + ++P AI   F LQD       F            L   C                 R+   PR   
Subjt:  QEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQD-------FRMPVKPTLRWASLGSACC----------------RQHTTPR---

Query:  --------YLGTGY--------CLLLPFF--SMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRES
                 + T Y         LLL     S  IDVG+II  ++ DC  KK   L FPN IT LC ++ ++E+
Subjt:  --------YLGTGY--------CLLLPFF--SMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRES

A0A6A2ZUE4 Uncharacterized protein8.9e-0829.67Show/hide
Query:  QEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQ-------DFRMPVK-------------PTLRW------------------ASL
        + P PVNA IV+EFY+N+   N   V+VRG+ ++++P AIN  F LQ        F   V              P  RW                    L
Subjt:  QEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSPEAINEMFDLQ-------DFRMPVK-------------PTLRW------------------ASL

Query:  GSACCRQHTTPRYLGTGY----CLLLP--FFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCG
         +   +    P    T       LLL       +ID+GKII      C K++   L FPN IT LC ++ +RE +   I  G
Subjt:  GSACCRQHTTPRYLGTGY----CLLLP--FFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACAAGAGCTCGAAAAGAGAGAGAAAGTGAAGAGGAAGAGGTGCCGGTTACACCGGAAGTGCAGAAAGGAAAAACGAAGAAAAAGAGAACGTCGGAGGAAAA
AGAGGCTAAACGAAGAAGGAGGCAGCAGAGGGCTGCGGAGCAAGAAACGATTCAAGAAGAGACGGTGAATGTCGCAGATACAGAGGGAGCTACACATCCTGAGACAGGAC
CGATAATGTCTGTTGCGGTTCAAGAAGGGAATGTCGAGAAACATCAAGAAACAGAGGGTGAAGAGCAGGACGAAGCGCCGCCGCATCAAGAGGAAGGCGGGTCGCGTGAA
GGTGTTCGGAACACGCCATCGCCTCCGGCATCGGACTCTGAGGAAGAAAAAAGGGAAGCGAGAATAAGGAAAAAGAGAAGAGGCAAGAAAGGCGGAAGAAGAACGTTTGC
GTGTCCAGAGAGAAAGCAGGGCAAAGGAATTGCCGAAGCATCAGGAGAAATTGAGGAGCCGAGGGCGCCATTCATTCGCTTCGTCAACGATCTTGCCCGAGCAAAATACC
AGGAGCCAGAACCTGTGAATGCCAACATTGTTCGAGAATTTTACGCCAATCTTGAGGTTAAGAATGATTTTGAGGTCATTGTTCGAGGAGTGCCTGTACAGTGGAGTCCT
GAGGCCATCAATGAAATGTTCGATCTCCAGGATTTCCGCATGCCAGTGAAGCCAACACTTAGATGGGCTTCATTAGGCTCCGCTTGCTGCCGACAACACACGACTCCACG
GTATCTCGGGACAGGGTATTGCTTGCTTTTGCCATTCTTCTCGATGAGTATAGATGTAGGAAAAATTATTTCTTCTGAGATTGTTGATTGCTGGAAGAAGAAGGTGGGGA
AGCTATTTTTTCCGAACGCGATTACGATGTTATGCAGCAGGCGGAGCCTAAGGGAATCATTGACACACCTAATCTGGTGCGGCTTCACGTATCAAGAGGTTCGCCAGGGT
GGGCTTGTGTATGGCGTCAATCAAATCCTAGAGCAACTGTCAGTATTGACCAGTAGGTTAGAGTTTGCTGAAAGGCAAGCTCAGACCTACTGGACTTATGCTAAGAGGAG
AGATGATGCGCTAAGGGGGGCCTTGCAAAGCAATTTCTCAACACCATATCAGCCTTCCAATGTTTCCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACAAGAGCTCGAAAAGAGAGAGAAAGTGAAGAGGAAGAGGTGCCGGTTACACCGGAAGTGCAGAAAGGAAAAACGAAGAAAAAGAGAACGTCGGAGGAAAA
AGAGGCTAAACGAAGAAGGAGGCAGCAGAGGGCTGCGGAGCAAGAAACGATTCAAGAAGAGACGGTGAATGTCGCAGATACAGAGGGAGCTACACATCCTGAGACAGGAC
CGATAATGTCTGTTGCGGTTCAAGAAGGGAATGTCGAGAAACATCAAGAAACAGAGGGTGAAGAGCAGGACGAAGCGCCGCCGCATCAAGAGGAAGGCGGGTCGCGTGAA
GGTGTTCGGAACACGCCATCGCCTCCGGCATCGGACTCTGAGGAAGAAAAAAGGGAAGCGAGAATAAGGAAAAAGAGAAGAGGCAAGAAAGGCGGAAGAAGAACGTTTGC
GTGTCCAGAGAGAAAGCAGGGCAAAGGAATTGCCGAAGCATCAGGAGAAATTGAGGAGCCGAGGGCGCCATTCATTCGCTTCGTCAACGATCTTGCCCGAGCAAAATACC
AGGAGCCAGAACCTGTGAATGCCAACATTGTTCGAGAATTTTACGCCAATCTTGAGGTTAAGAATGATTTTGAGGTCATTGTTCGAGGAGTGCCTGTACAGTGGAGTCCT
GAGGCCATCAATGAAATGTTCGATCTCCAGGATTTCCGCATGCCAGTGAAGCCAACACTTAGATGGGCTTCATTAGGCTCCGCTTGCTGCCGACAACACACGACTCCACG
GTATCTCGGGACAGGGTATTGCTTGCTTTTGCCATTCTTCTCGATGAGTATAGATGTAGGAAAAATTATTTCTTCTGAGATTGTTGATTGCTGGAAGAAGAAGGTGGGGA
AGCTATTTTTTCCGAACGCGATTACGATGTTATGCAGCAGGCGGAGCCTAAGGGAATCATTGACACACCTAATCTGGTGCGGCTTCACGTATCAAGAGGTTCGCCAGGGT
GGGCTTGTGTATGGCGTCAATCAAATCCTAGAGCAACTGTCAGTATTGACCAGTAGGTTAGAGTTTGCTGAAAGGCAAGCTCAGACCTACTGGACTTATGCTAAGAGGAG
AGATGATGCGCTAAGGGGGGCCTTGCAAAGCAATTTCTCAACACCATATCAGCCTTCCAATGTTTCCCGATGA
Protein sequenceShow/hide protein sequence
MAKTRARKERESEEEEVPVTPEVQKGKTKKKRTSEEKEAKRRRRQQRAAEQETIQEETVNVADTEGATHPETGPIMSVAVQEGNVEKHQETEGEEQDEAPPHQEEGGSRE
GVRNTPSPPASDSEEEKREARIRKKRRGKKGGRRTFACPERKQGKGIAEASGEIEEPRAPFIRFVNDLARAKYQEPEPVNANIVREFYANLEVKNDFEVIVRGVPVQWSP
EAINEMFDLQDFRMPVKPTLRWASLGSACCRQHTTPRYLGTGYCLLLPFFSMSIDVGKIISSEIVDCWKKKVGKLFFPNAITMLCSRRSLRESLTHLIWCGFTYQEVRQG
GLVYGVNQILEQLSVLTSRLEFAERQAQTYWTYAKRRDDALRGALQSNFSTPYQPSNVSR