; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018182 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018182
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:18195785..18196425
RNA-Seq ExpressionLag0018182
SyntenyLag0018182
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.7e-2436.49Show/hide
Query:  GGDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEW-SF
        GGDFNE+   SEK  GV R++  MQ F+D +D+CGL+DPG+ G  FTWC+       IWERLDRF +NT +     +  + HL  +ASDH+PI+AEW   
Subjt:  GGDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEW-SF

Query:  EPINLRLVSPRRLRRFEE------ACSLESSQIW-------------------------------GSIRGAIARIEKEIQGLSNLAGGTDLNLLLEKETD
            +     RR  RFEE       C     ++W                               GS+RGAI R E EIQ +         + L E + D
Subjt:  EPINLRLVSPRRLRRFEE------ACSLESSQIW-------------------------------GSIRGAIARIEKEIQGLSNLAGGTDLNLLLEKETD

Query:  LYNLLEDDEIY
        L  LLE++E Y
Subjt:  LYNLLEDDEIY

XP_023896927.1 uncharacterized protein LOC112008817 [Quercus suber]2.3e-1851.09Show/hide
Query:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPI
        GDFNE+T   EK GG +R E+ MQ+FRD +DVCGL D GYSG  FTWCN ++N  L+W RLDR         +  +  + HLP  +SDHKP+
Subjt:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPI

XP_030923017.1 uncharacterized protein LOC115949892 [Quercus lobata]1.8e-1840.6Show/hide
Query:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSF-E
        GDFNE+T   EK GG +R E+ MQ+FRD +DVCGL D G+SG  FTWCN ++N  L+W RLDR         +  +  + HLP  +SDHKP+   W   +
Subjt:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSF-E

Query:  PINLRLVSPRRLRRFE------EACSLESSQIW
         +  R    ++  RFE      E C      +W
Subjt:  PINLRLVSPRRLRRFE------EACSLESSQIW

XP_030924992.1 uncharacterized protein LOC115952038 [Quercus lobata]4.2e-2047.86Show/hide
Query:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEW-SFE
        GDFNE+T   EK GG LR ++ MQ FRD +D CG  D G+SG  FTWCNN+F+G L+W RLDR   +T       S  + HL   +SDHKPI   W   +
Subjt:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEW-SFE

Query:  PINLRLVSPRRLRRFEE
         ++ R   P+R  RFEE
Subjt:  PINLRLVSPRRLRRFEE

XP_030940268.1 uncharacterized protein LOC115965235 [Quercus lobata]3.2e-2047.01Show/hide
Query:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEW-SFE
        GDFNE+TS  EK GG LR +R MQ FRD +D CG  D G++G  FTWCNN+F+G L+W RLDR   +     +  S  + HL   +SDHKPI   W   +
Subjt:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEW-SFE

Query:  PINLRLVSPRRLRRFEE
         ++ R   P++  RFEE
Subjt:  PINLRLVSPRRLRRFEE

TrEMBL top hitse value%identityAlignment
A0A2N9FVV5 Reverse transcriptase domain-containing protein7.8e-2037.29Show/hide
Query:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEP
        GDFNE+ S  EK+GG  R E  MQ FRDV+D CG  D G+ GP FTWCNN+ NGV +WE+LDR  +N+    +   + V H+    SDH P+   W   P
Subjt:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEP

Query:  INLRLVSPRRLRRFE------EACSLESSQIW--GSIRGAIARIEKEIQGL-------SNLAGGTDLNLLLEKETDL
           R    R+L RFE      E C       W  G +   +  + + ++         SN   G+   LL EK   L
Subjt:  INLRLVSPRRLRRFE------EACSLESSQIW--GSIRGAIARIEKEIQGL-------SNLAGGTDLNLLLEKETDL

A0A2N9IIR5 Uncharacterized protein1.2e-2034.13Show/hide
Query:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEP
        GDFNE+ S SEK+GG  R +  MQ FRDV+D CG  D G+ GP+FTWCNN+ NG  +WERLDR  +N+    R    +V H+    SDH P+   W   P
Subjt:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEP

Query:  INLRLVSPRRLRRFE------EAC-------------------------------SLESSQIWGSIRGAIARIEKEIQGLSNLA-GGTDLNLLLEKETDL
         ++ +   ++L RFE      E C                               S  S Q +GS+R  +A    ++Q    L+  G D N ++    +L
Subjt:  INLRLVSPRRLRRFE------EAC-------------------------------SLESSQIWGSIRGAIARIEKEIQGLSNLA-GGTDLNLLLEKETDL

Query:  YNLLEDDE
          LL  +E
Subjt:  YNLLEDDE

A0A2N9IWN7 Uncharacterized protein5.9e-2047.41Show/hide
Query:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEP
        GDFNE+ S  EK+GG +R  R MQ+FRD ID CG  D GY G  FTWCNN+     +WERLDR    T   +      V HL  ++SDH PI  ++S  P
Subjt:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEP

Query:  INLRLVSPRRLRRFEE
        +N R   P R+ RF+E
Subjt:  INLRLVSPRRLRRFEE

A0A2N9IXK4 RNase H domain-containing protein9.2e-2147.46Show/hide
Query:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEP
        GDFNE+ S  EKQGG +R  R MQ+FRD ID CG  D G++GP FTWCNN+     +WERLDR    T   +      V HL  ++SDH PI  ++S  P
Subjt:  GDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEP

Query:  INLRLVSPR--RLRRFEE
         +     PR  R+ RFEE
Subjt:  INLRLVSPR--RLRRFEE

A0A6J1DRA0 uncharacterized protein LOC1110224238.0e-2536.49Show/hide
Query:  GGDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEW-SF
        GGDFNE+   SEK  GV R++  MQ F+D +D+CGL+DPG+ G  FTWC+       IWERLDRF +NT +     +  + HL  +ASDH+PI+AEW   
Subjt:  GGDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEW-SF

Query:  EPINLRLVSPRRLRRFEE------ACSLESSQIW-------------------------------GSIRGAIARIEKEIQGLSNLAGGTDLNLLLEKETD
            +     RR  RFEE       C     ++W                               GS+RGAI R E EIQ +         + L E + D
Subjt:  EPINLRLVSPRRLRRFEE------ACSLESSQIW-------------------------------GSIRGAIARIEKEIQGLSNLAGGTDLNLLLEKETD

Query:  LYNLLEDDEIY
        L  LLE++E Y
Subjt:  LYNLLEDDEIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCCTGGGGGAGACTTTAATGAGATGACAAGTGGCTCAGAAAAGCAAGGAGGAGTGCTCCGTCAGGAGAGAGCTATGCAAGAGTTCAGGGATGTGATTGATGTGTG
TGGCCTCATCGATCCAGGCTACTCTGGACCTGACTTCACATGGTGTAACAATCAGTTTAATGGGGTTCTCATTTGGGAGAGACTTGACCGTTTTTTTCTAAATACTTTGA
TGCAAAATCGTTGCAGTTCATTCAGTGTTATGCATCTTCCCATAATAGCGTCGGACCATAAACCTATTATTGCTGAATGGTCCTTCGAGCCCATAAACTTAAGATTGGTA
TCTCCAAGACGACTAAGAAGATTCGAAGAAGCCTGCTCATTGGAGTCGTCTCAAATATGGGGTTCTATCAGAGGTGCTATAGCCAGAATTGAGAAGGAGATACAAGGGCT
CTCTAATTTGGCTGGAGGCACAGACCTGAATTTGCTTTTAGAGAAAGAGACAGATCTTTATAACCTCTTGGAAGATGATGAAATCTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCCTGGGGGAGACTTTAATGAGATGACAAGTGGCTCAGAAAAGCAAGGAGGAGTGCTCCGTCAGGAGAGAGCTATGCAAGAGTTCAGGGATGTGATTGATGTGTG
TGGCCTCATCGATCCAGGCTACTCTGGACCTGACTTCACATGGTGTAACAATCAGTTTAATGGGGTTCTCATTTGGGAGAGACTTGACCGTTTTTTTCTAAATACTTTGA
TGCAAAATCGTTGCAGTTCATTCAGTGTTATGCATCTTCCCATAATAGCGTCGGACCATAAACCTATTATTGCTGAATGGTCCTTCGAGCCCATAAACTTAAGATTGGTA
TCTCCAAGACGACTAAGAAGATTCGAAGAAGCCTGCTCATTGGAGTCGTCTCAAATATGGGGTTCTATCAGAGGTGCTATAGCCAGAATTGAGAAGGAGATACAAGGGCT
CTCTAATTTGGCTGGAGGCACAGACCTGAATTTGCTTTTAGAGAAAGAGACAGATCTTTATAACCTCTTGGAAGATGATGAAATCTACTAG
Protein sequenceShow/hide protein sequence
MGPGGDFNEMTSGSEKQGGVLRQERAMQEFRDVIDVCGLIDPGYSGPDFTWCNNQFNGVLIWERLDRFFLNTLMQNRCSSFSVMHLPIIASDHKPIIAEWSFEPINLRLV
SPRRLRRFEEACSLESSQIWGSIRGAIARIEKEIQGLSNLAGGTDLNLLLEKETDLYNLLEDDEIY