; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018184 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018184
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPlant transposase
Genome locationchr5:18215690..18219742
RNA-Seq ExpressionLag0018184
SyntenyLag0018184
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036985.1 uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa]1.6e-5047.08Show/hide
Query:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----
        +KAMKKKQLPHTCSRKGYARL EEM                                    ERIEQT+ ET  S  N+V+DALSKV GPDR HV+     
Subjt:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----

Query:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH
                                                                PSEELSN T SV K  N+P   P P PSSI NN+Q +CKLLDW+
Subjt:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH

Query:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        GSGEI+AEGRWSSN+P A+VHHIPIGPHA+RVW+DV+KKP+ +LWRPTSEMTCIEEA
Subjt:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

KAA0040964.1 putative TNP1-like transposon protein [Cucumis melo var. makuwa]1.6e-5047.08Show/hide
Query:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----
        +KAMKKKQLPHTCSRKGYARL EEM                                    ERIEQT+ ET  S  N+V+DALSKV GPDR HV+     
Subjt:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----

Query:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH
                                                                PSEELSN T SV K  N+P   P P PSSI NN+Q +CKLLDW+
Subjt:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH

Query:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        GSGEI+AEGRWSSN+P A+VHHIPIGPHA+RVW+DV+KKP+ +LWRPTSEMTCIEEA
Subjt:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

KAA0058414.1 putative TNP1-like transposon protein [Cucumis melo var. makuwa]1.2e-5049.6Show/hide
Query:  DYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVE
        D+   NT       S     +KAMKKKQLPHTCSRKGYA L EEM                                    E I+QT+ ET  S  NMV+
Subjt:  DYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVE

Query:  DALSKVFGPDREHVK------------------------PSEELSNETTSVPKPPNVPSTFPTPYPS--------SIINNTQIRCKLLDWHGSGEIIAEG
        DALSKV GPDR HV+                        PSEELSN T SV K  N+P   P P PS        SI NN+Q +CKLLDW+GSGEI+AEG
Subjt:  DALSKVFGPDREHVK------------------------PSEELSNETTSVPKPPNVPSTFPTPYPS--------SIINNTQIRCKLLDWHGSGEIIAEG

Query:  RWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        RWSSN+P ALVHH+PIGPHA+ VWVDV+KKP+ +LWRPTSEMTCIEEA
Subjt:  RWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

TYK07512.1 uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa]1.6e-5047.08Show/hide
Query:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----
        +KAMKKKQLPHTCSRKGYARL EEM                                    ERIEQT+ ET  S  N+V+DALSKV GPDR HV+     
Subjt:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----

Query:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH
                                                                PSEELSN T SV K  N+P   P P PSSI NN+Q +CKLLDW+
Subjt:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH

Query:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        GSGEI+AEGRWSSN+P A+VHHIPIGPHA+RVW+DV+KKP+ +LWRPTSEMTCIEEA
Subjt:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

TYK18483.1 Plant transposase [Cucumis melo var. makuwa]1.2e-5049.6Show/hide
Query:  DYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVE
        D+   NT       S     +KAMKKKQLPHTCSRKGYA L EEM                                    E I+QT+ ET  S  NMV+
Subjt:  DYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVE

Query:  DALSKVFGPDREHVK------------------------PSEELSNETTSVPKPPNVPSTFPTPYPS--------SIINNTQIRCKLLDWHGSGEIIAEG
        DALSKV GPDR HV+                        PSEELSN T SV K  N+P   P P PS        SI NN+Q +CKLLDW+GSGEI+AEG
Subjt:  DALSKVFGPDREHVK------------------------PSEELSNETTSVPKPPNVPSTFPTPYPS--------SIINNTQIRCKLLDWHGSGEIIAEG

Query:  RWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        RWSSN+P ALVHH+PIGPHA+ VWVDV+KKP+ +LWRPTSEMTCIEEA
Subjt:  RWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

TrEMBL top hitse value%identityAlignment
A0A5A7T672 Uncharacterized protein7.6e-5147.08Show/hide
Query:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----
        +KAMKKKQLPHTCSRKGYARL EEM                                    ERIEQT+ ET  S  N+V+DALSKV GPDR HV+     
Subjt:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----

Query:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH
                                                                PSEELSN T SV K  N+P   P P PSSI NN+Q +CKLLDW+
Subjt:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH

Query:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        GSGEI+AEGRWSSN+P A+VHHIPIGPHA+RVW+DV+KKP+ +LWRPTSEMTCIEEA
Subjt:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

A0A5A7TBX7 Putative TNP1-like transposon protein7.6e-5147.08Show/hide
Query:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----
        +KAMKKKQLPHTCSRKGYARL EEM                                    ERIEQT+ ET  S  N+V+DALSKV GPDR HV+     
Subjt:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----

Query:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH
                                                                PSEELSN T SV K  N+P   P P PSSI NN+Q +CKLLDW+
Subjt:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH

Query:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        GSGEI+AEGRWSSN+P A+VHHIPIGPHA+RVW+DV+KKP+ +LWRPTSEMTCIEEA
Subjt:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

A0A5A7UTC4 Putative TNP1-like transposon protein5.8e-5149.6Show/hide
Query:  DYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVE
        D+   NT       S     +KAMKKKQLPHTCSRKGYA L EEM                                    E I+QT+ ET  S  NMV+
Subjt:  DYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVE

Query:  DALSKVFGPDREHVK------------------------PSEELSNETTSVPKPPNVPSTFPTPYPS--------SIINNTQIRCKLLDWHGSGEIIAEG
        DALSKV GPDR HV+                        PSEELSN T SV K  N+P   P P PS        SI NN+Q +CKLLDW+GSGEI+AEG
Subjt:  DALSKVFGPDREHVK------------------------PSEELSNETTSVPKPPNVPSTFPTPYPS--------SIINNTQIRCKLLDWHGSGEIIAEG

Query:  RWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        RWSSN+P ALVHH+PIGPHA+ VWVDV+KKP+ +LWRPTSEMTCIEEA
Subjt:  RWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

A0A5D3D4L2 Plant transposase5.8e-5149.6Show/hide
Query:  DYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVE
        D+   NT       S     +KAMKKKQLPHTCSRKGYA L EEM                                    E I+QT+ ET  S  NMV+
Subjt:  DYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVE

Query:  DALSKVFGPDREHVK------------------------PSEELSNETTSVPKPPNVPSTFPTPYPS--------SIINNTQIRCKLLDWHGSGEIIAEG
        DALSKV GPDR HV+                        PSEELSN T SV K  N+P   P P PS        SI NN+Q +CKLLDW+GSGEI+AEG
Subjt:  DALSKVFGPDREHVK------------------------PSEELSNETTSVPKPPNVPSTFPTPYPS--------SIINNTQIRCKLLDWHGSGEIIAEG

Query:  RWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        RWSSN+P ALVHH+PIGPHA+ VWVDV+KKP+ +LWRPTSEMTCIEEA
Subjt:  RWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

A0A5D3DCM2 Uncharacterized protein7.6e-5147.08Show/hide
Query:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----
        +KAMKKKQLPHTCSRKGYARL EEM                                    ERIEQT+ ET  S  N+V+DALSKV GPDR HV+     
Subjt:  HKAMKKKQLPHTCSRKGYARLPEEM------------------------------------ERIEQTDVETITSPNNMVEDALSKVFGPDREHVK-----

Query:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH
                                                                PSEELSN T SV K  N+P   P P PSSI NN+Q +CKLLDW+
Subjt:  --------------------------------------------------------PSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWH

Query:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA
        GSGEI+AEGRWSSN+P A+VHHIPIGPHA+RVW+DV+KKP+ +LWRPTSEMTCIEEA
Subjt:  GSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCIEEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACACAAAAAAGAACTTTAAGAACTGACCACCATGTTGATCGAAGCATGCCTCCATTGTTCTTTGGGAGTATTTCAAATCCAGAGGAGTACCTTGTTTGGGAGGA
GGAAATTGATGCCATATTTGGTCACCACCACTATAGTGAAAAGGGAAAGGTAAAATTTATCATCTCTTCATTTGAGGATTATGCCCTAACATTGTGGAATATTTTAGTGT
CGAAAAGGAGAAAGAATGGAAATCATGCAATACCCTCATGGGAAGAAATCAAACTTCTAATGAGGAAGCGTTTTGTTCACAAGTCATTCCACAAATTGCAAACTTTGAAA
CAAGGGAGCAAGAGTGTAGAAAAATACTATGAAGAGATGCTCCTATTACTTGAGGAGATCAATTTGGATGAGGATAAGGATGCTACCATGGACCGATTCTACCAAGGACT
TAATGAGGAGATTGCTGAGATGATTGTTGAACGAGAAGAAATTCGACCTTGTGAGGATTTGGAGGAGATGGTGTATGTTGCCATCAAGGTAGAAAAGATGCTCCAAAAAA
GATCTCTAAGGTACATTAAATCTAAGCTTAGCTACAATTCCAACATATTCATGGAAAGAGTTAGTTTACCTACTAGATATGAGCATGTTGATAAGGTAGAAAGTAGAAAA
GAGAAGCTTGCTACTATTGTACCTATGCATGATAATGATATTTTGCCTAGTAGGTCATTAGATAGCAAGGAATCACATGATTGTAATACTACTACTACTATTGTACTACT
TACTGGAGAAGCATATATTTATCGTAGTGGAGTAGAGAAAGAAGATGGTAGTAAGCTTGAAACTAGGATACTTTGTGATGACATTGTTAATATATTAGATCACAAAGTAA
CATGTGATCCTACTCTTGTATCATTCCTTCCAAGAGAAGTAAAACTTGATGTGTGTGAGCTTCAACCAAGTTTGCCTAGTTTTTCTTTTGAGTTTTTACAGGTTGTTAAA
GCACTGATTATGAAGCAAAACTCAAAGATTGGTTCTTTCGATGGTTGCAAGCTATATGTGAATTGGAAGCACCATCATTCTTTCCGAAAGAGATGGAATCCAGAAAGAAT
CGAGCATTTGACATCTCATGACTACAAGGGTTCAAATACCCAAAGGATTCTTGATTCCAATTCGCTAGGGTTTTCGTATCATAAAGCCATGAAGAAGAAACAACTTCCAC
ATACATGTAGTAGGAAAGGGTATGCTCGCTTGCCTGAAGAGATGGAACGTATTGAACAAACTGATGTTGAGACAATAACTTCTCCAAATAACATGGTTGAGGATGCATTG
AGTAAAGTTTTTGGTCCTGATCGTGAGCATGTTAAACCAAGCGAGGAACTTTCAAATGAAACTACAAGTGTACCTAAGCCACCAAATGTTCCTTCAACTTTTCCTACACC
ATATCCATCGAGTATTATTAATAATACTCAAATTAGGTGCAAGTTATTAGATTGGCATGGCTCAGGAGAGATAATTGCAGAAGGACGTTGGTCTTCTAATGAACCAGCTG
CTCTTGTTCATCACATTCCTATTGGACCACATGCAGTTAGAGTTTGGGTTGATGTCTCAAAGAAACCTGATGGATTCTTATGGAGGCCCACATCAGAAATGACATGCATT
GAAGAAGCTTCTGACCACTTGGATCAAGTCACACTCCACACGCACCGGGCAGGAAGGAGATGCCGGCAAAGCTTGGAGACTCTCAACAATTGCAAGCGTCTCAAGCCAGG
GAATACTCCATCGGCGATTGAAACATCGATAACCGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACACAAAAAAGAACTTTAAGAACTGACCACCATGTTGATCGAAGCATGCCTCCATTGTTCTTTGGGAGTATTTCAAATCCAGAGGAGTACCTTGTTTGGGAGGA
GGAAATTGATGCCATATTTGGTCACCACCACTATAGTGAAAAGGGAAAGGTAAAATTTATCATCTCTTCATTTGAGGATTATGCCCTAACATTGTGGAATATTTTAGTGT
CGAAAAGGAGAAAGAATGGAAATCATGCAATACCCTCATGGGAAGAAATCAAACTTCTAATGAGGAAGCGTTTTGTTCACAAGTCATTCCACAAATTGCAAACTTTGAAA
CAAGGGAGCAAGAGTGTAGAAAAATACTATGAAGAGATGCTCCTATTACTTGAGGAGATCAATTTGGATGAGGATAAGGATGCTACCATGGACCGATTCTACCAAGGACT
TAATGAGGAGATTGCTGAGATGATTGTTGAACGAGAAGAAATTCGACCTTGTGAGGATTTGGAGGAGATGGTGTATGTTGCCATCAAGGTAGAAAAGATGCTCCAAAAAA
GATCTCTAAGGTACATTAAATCTAAGCTTAGCTACAATTCCAACATATTCATGGAAAGAGTTAGTTTACCTACTAGATATGAGCATGTTGATAAGGTAGAAAGTAGAAAA
GAGAAGCTTGCTACTATTGTACCTATGCATGATAATGATATTTTGCCTAGTAGGTCATTAGATAGCAAGGAATCACATGATTGTAATACTACTACTACTATTGTACTACT
TACTGGAGAAGCATATATTTATCGTAGTGGAGTAGAGAAAGAAGATGGTAGTAAGCTTGAAACTAGGATACTTTGTGATGACATTGTTAATATATTAGATCACAAAGTAA
CATGTGATCCTACTCTTGTATCATTCCTTCCAAGAGAAGTAAAACTTGATGTGTGTGAGCTTCAACCAAGTTTGCCTAGTTTTTCTTTTGAGTTTTTACAGGTTGTTAAA
GCACTGATTATGAAGCAAAACTCAAAGATTGGTTCTTTCGATGGTTGCAAGCTATATGTGAATTGGAAGCACCATCATTCTTTCCGAAAGAGATGGAATCCAGAAAGAAT
CGAGCATTTGACATCTCATGACTACAAGGGTTCAAATACCCAAAGGATTCTTGATTCCAATTCGCTAGGGTTTTCGTATCATAAAGCCATGAAGAAGAAACAACTTCCAC
ATACATGTAGTAGGAAAGGGTATGCTCGCTTGCCTGAAGAGATGGAACGTATTGAACAAACTGATGTTGAGACAATAACTTCTCCAAATAACATGGTTGAGGATGCATTG
AGTAAAGTTTTTGGTCCTGATCGTGAGCATGTTAAACCAAGCGAGGAACTTTCAAATGAAACTACAAGTGTACCTAAGCCACCAAATGTTCCTTCAACTTTTCCTACACC
ATATCCATCGAGTATTATTAATAATACTCAAATTAGGTGCAAGTTATTAGATTGGCATGGCTCAGGAGAGATAATTGCAGAAGGACGTTGGTCTTCTAATGAACCAGCTG
CTCTTGTTCATCACATTCCTATTGGACCACATGCAGTTAGAGTTTGGGTTGATGTCTCAAAGAAACCTGATGGATTCTTATGGAGGCCCACATCAGAAATGACATGCATT
GAAGAAGCTTCTGACCACTTGGATCAAGTCACACTCCACACGCACCGGGCAGGAAGGAGATGCCGGCAAAGCTTGGAGACTCTCAACAATTGCAAGCGTCTCAAGCCAGG
GAATACTCCATCGGCGATTGAAACATCGATAACCGACTGA
Protein sequenceShow/hide protein sequence
MSTQKRTLRTDHHVDRSMPPLFFGSISNPEEYLVWEEEIDAIFGHHHYSEKGKVKFIISSFEDYALTLWNILVSKRRKNGNHAIPSWEEIKLLMRKRFVHKSFHKLQTLK
QGSKSVEKYYEEMLLLLEEINLDEDKDATMDRFYQGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRYIKSKLSYNSNIFMERVSLPTRYEHVDKVESRK
EKLATIVPMHDNDILPSRSLDSKESHDCNTTTTIVLLTGEAYIYRSGVEKEDGSKLETRILCDDIVNILDHKVTCDPTLVSFLPREVKLDVCELQPSLPSFSFEFLQVVK
ALIMKQNSKIGSFDGCKLYVNWKHHHSFRKRWNPERIEHLTSHDYKGSNTQRILDSNSLGFSYHKAMKKKQLPHTCSRKGYARLPEEMERIEQTDVETITSPNNMVEDAL
SKVFGPDREHVKPSEELSNETTSVPKPPNVPSTFPTPYPSSIINNTQIRCKLLDWHGSGEIIAEGRWSSNEPAALVHHIPIGPHAVRVWVDVSKKPDGFLWRPTSEMTCI
EEASDHLDQVTLHTHRAGRRCRQSLETLNNCKRLKPGNTPSAIETSITD