; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018187 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018187
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr5:18397175..18398440
RNA-Seq ExpressionLag0018187
SyntenyLag0018187
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]6.0e-5154.64Show/hide
Query:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN
        Y  P  RK KKASR +ST NPDG  I+  +WS +E   F ELG++D+  + TYLAAFLSCWLC+F+FP K   L L VF+VASLMA G  +SL +PVLAN
Subjt:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN

Query:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD
        I HGLG I KAS   GR +  F +HYV+ WLA+YF THY +   V+GP M +FS EGE+ YFG +EAR  IH G  + W+AN+  R+K   M D
Subjt:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]7.0e-5255.67Show/hide
Query:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN
        Y+KP  RK KKASR +ST NPDG  I+  +WS +E   F ELG+ D+  + TYLAAFLSCWLC+F+FP K   L L VF+VASLMA G  +SL +PVLAN
Subjt:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN

Query:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD
        I HGLG I KAS   GR +  F +HYV+ WLA+YF THY +   V+GP M +FS EG + YFG +EAR  IH G  + W+ANL  RNK   M D
Subjt:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]6.0e-5154.64Show/hide
Query:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN
        Y+KP  RK KKASR +ST NPDG  I+  +WS +E   F ELG+ D+  + TYLAAFLSCWLC+F+FP K   L  EVF+VASLM  G  +SL +PVLAN
Subjt:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN

Query:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD
        I HGLG I KAS   GR +  F +HYV+ WLA+YF THY +   V+GP M +FS EG + YFG +EA   IH G  + W+ANL  RNK   M D
Subjt:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD

KAA0062705.1 uncharacterized protein E6C27_scaffold382G00250 [Cucumis melo var. makuwa]4.9e-5361.93Show/hide
Query:  TIRDLKYEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLV
        T  ++KY KPP RK KK SRPRSTHNP+G PIK  DWSE EL  F +LGV +E  + TYLA  LSCWLCVF+FP+KQ SL  EVFKVASLMAEGY FSL 
Subjt:  TIRDLKYEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLV

Query:  IPVLANINHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVH
        IPVL+NI   L QI+ ++ S G S ACF +HYV+ WL  YFNTHY     ++GP MV+FS EG AKY+ N EAR +
Subjt:  IPVLANINHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVH

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.8e-6864Show/hide
Query:  TIRDLKYEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLV
        T  ++KY KPPPRK KK SRPRSTHNPDG+PI+  DWS+ EL+ F +L V D+  + TYLAAFLSCWLCVF+FP+KQ+SL  EVFKVASLMAEGY FSL 
Subjt:  TIRDLKYEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLV

Query:  IPVLANINHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD
        +PVLANI  GL Q++ ++ S G S ACF +HYV+ WLA YFNTHY     ++GP MV+FS EG AKY+ N EAR HIHKGKYVSW+A LP +NK  ++TD
Subjt:  IPVLANINHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD

TrEMBL top hitse value%identityAlignment
A0A5A7T019 PMD domain-containing protein2.9e-5154.64Show/hide
Query:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN
        Y  P  RK KKASR +ST NPDG  I+  +WS +E   F ELG++D+  + TYLAAFLSCWLC+F+FP K   L L VF+VASLMA G  +SL +PVLAN
Subjt:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN

Query:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD
        I HGLG I KAS   GR +  F +HYV+ WLA+YF THY +   V+GP M +FS EGE+ YFG +EAR  IH G  + W+AN+  R+K   M D
Subjt:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD

A0A5A7UGW6 PMD domain-containing protein3.4e-5255.67Show/hide
Query:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN
        Y+KP  RK KKASR +ST NPDG  I+  +WS +E   F ELG+ D+  + TYLAAFLSCWLC+F+FP K   L L VF+VASLMA G  +SL +PVLAN
Subjt:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN

Query:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD
        I HGLG I KAS   GR +  F +HYV+ WLA+YF THY +   V+GP M +FS EG + YFG +EAR  IH G  + W+ANL  RNK   M D
Subjt:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD

A0A5A7UVI5 PMD domain-containing protein2.9e-5154.64Show/hide
Query:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN
        Y+KP  RK KKASR +ST NPDG  I+  +WS +E   F ELG+ D+  + TYLAAFLSCWLC+F+FP K   L  EVF+VASLM  G  +SL +PVLAN
Subjt:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN

Query:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD
        I HGLG I KAS   GR +  F +HYV+ WLA+YF THY +   V+GP M +FS EG + YFG +EA   IH G  + W+ANL  RNK   M D
Subjt:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD

A0A5D3D2A0 PMD domain-containing protein9.3e-5052.06Show/hide
Query:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN
        Y+KP  RK KK SR +ST NPDG+ I+  DW+ +E   F ELG++++  + TYL  FLSCWLC+F+FP K   L L VF  ASL+A G  +SL +PVLAN
Subjt:  YEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLAN

Query:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD
        I HGLG I KAS   GR +  F +HYV+ WLA+YF THY +   V+GP M +F +EG + YFG +EAR  IH G  + W+ANLP +NK   M D
Subjt:  INHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTD

A0A5D3DAL3 PMD domain-containing protein2.4e-5361.93Show/hide
Query:  TIRDLKYEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLV
        T  ++KY KPP RK KK SRPRSTHNP+G PIK  DWSE EL  F +LGV +E  + TYLA  LSCWLCVF+FP+KQ SL  EVFKVASLMAEGY FSL 
Subjt:  TIRDLKYEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLV

Query:  IPVLANINHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVH
        IPVL+NI   L QI+ ++ S G S ACF +HYV+ WL  YFNTHY     ++GP MV+FS EG AKY+ N EAR +
Subjt:  IPVLANINHGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCATAAGAGATTTGAAGTATGAGAAGCCTCCTCCTCGAAAAGTAAAGAAAGCTAGTCGTCCTCGTTCGACTCATAACCCGGATGGAGTTCCTATCAAGTGTTC
GGATTGGTCTGAGAAAGAACTTGAGTTCTTTTGTGAGCTAGGTGTAGAAGATGAATTCATAGAAAATACCTACTTGGCTGCTTTTCTTTCTTGTTGGTTATGTGTATTTA
TGTTTCCCAACAAGCAGATTTCTCTTTGTCTAGAGGTTTTTAAAGTTGCAAGTCTTATGGCAGAAGGTTATGCTTTTAGTCTTGTTATTCCAGTTTTGGCTAATATCAAT
CATGGGTTGGGCCAGATCTATAAAGCATCTCCTTCGACAGGACGTTCAGAGGCTTGTTTTCTAGTGCATTATGTTTACTTTTGGCTTGCTTATTATTTTAACACGCATTA
TGCAGTTCAAGAAAGAGTTAAGGGCCCAATGATGGTTGATTTTTCTGAAGAGGGTGAAGCTAAATACTTTGGCAATTTTGAGGCTCGTGTACATATTCATAAAGGTAAAT
ATGTATCGTGGTATGCGAATCTCCCTCCCCGCAATAAAGGCATGGTTATGACAGATCATTTTGGCATTCCTCATCTTTATAAGCATTTGATCATGCCTCTTATCTTCACG
ATGTGGGTCTTCGATGGTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCATAAGAGATTTGAAGTATGAGAAGCCTCCTCCTCGAAAAGTAAAGAAAGCTAGTCGTCCTCGTTCGACTCATAACCCGGATGGAGTTCCTATCAAGTGTTC
GGATTGGTCTGAGAAAGAACTTGAGTTCTTTTGTGAGCTAGGTGTAGAAGATGAATTCATAGAAAATACCTACTTGGCTGCTTTTCTTTCTTGTTGGTTATGTGTATTTA
TGTTTCCCAACAAGCAGATTTCTCTTTGTCTAGAGGTTTTTAAAGTTGCAAGTCTTATGGCAGAAGGTTATGCTTTTAGTCTTGTTATTCCAGTTTTGGCTAATATCAAT
CATGGGTTGGGCCAGATCTATAAAGCATCTCCTTCGACAGGACGTTCAGAGGCTTGTTTTCTAGTGCATTATGTTTACTTTTGGCTTGCTTATTATTTTAACACGCATTA
TGCAGTTCAAGAAAGAGTTAAGGGCCCAATGATGGTTGATTTTTCTGAAGAGGGTGAAGCTAAATACTTTGGCAATTTTGAGGCTCGTGTACATATTCATAAAGGTAAAT
ATGTATCGTGGTATGCGAATCTCCCTCCCCGCAATAAAGGCATGGTTATGACAGATCATTTTGGCATTCCTCATCTTTATAAGCATTTGATCATGCCTCTTATCTTCACG
ATGTGGGTCTTCGATGGTCATTGA
Protein sequenceShow/hide protein sequence
MATIRDLKYEKPPPRKVKKASRPRSTHNPDGVPIKCSDWSEKELEFFCELGVEDEFIENTYLAAFLSCWLCVFMFPNKQISLCLEVFKVASLMAEGYAFSLVIPVLANIN
HGLGQIYKASPSTGRSEACFLVHYVYFWLAYYFNTHYAVQERVKGPMMVDFSEEGEAKYFGNFEARVHIHKGKYVSWYANLPPRNKGMVMTDHFGIPHLYKHLIMPLIFT
MWVFDGH