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Lag0018257 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018257
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationchr5:20663904..20664296
RNA-Seq ExpressionLag0018257
SyntenyLag0018257
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063584.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa]3.4e-1951.69Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSIS----RARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK
        LVATVTF AG  +PGGLEDKGED GLA LT+K AFK F++FN+LAF SS   V FHF + +      R+ +K     FT+  +  M+ AFC G+YV+LTK
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSIS----RARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK

Query:  SSGLYVVPFLIPAFSVFL
        S+GL +VP ++ A  +F+
Subjt:  SSGLYVVPFLIPAFSVFL

XP_008460825.1 PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]1.7e-1850.85Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSIS----RARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK
        LVATVTF AG  +PGGLEDKGED GLA LT+K AFK F++FN+LAF SS   V FHF + +      R+ +K     FT+  +  M+ AFC G+YV+LTK
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSIS----RARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK

Query:  SSGLYVVPFLIPAFSVFL
         +GL +VP ++ A  +F+
Subjt:  SSGLYVVPFLIPAFSVFL

XP_010040863.2 ankyrin repeat-containing protein At5g02620 isoform X1 [Eucalyptus grandis]3.2e-1746.51Show/hide
Query:  MLVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSI---SRARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK
        +L+ATV+FAA FT+PGG    G DQG+A L  +AAFK F++ NT AF  S LA+   F +     R R+ +  VA++   V+ILAM+LAF  GTYVVL+K
Subjt:  MLVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSI---SRARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK

Query:  SSGLYVVPFLIPAFSVFLYPTVYIITGVI
        ++GL +VPF++    V    T+Y+I G +
Subjt:  SSGLYVVPFLIPAFSVFLYPTVYIITGVI

XP_022143167.1 ankyrin repeat-containing protein At5g02620-like [Momordica charantia]9.7e-2258.82Show/hide
Query:  MLVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFH-SISR--ARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK
        MLVATVTFAAGFTVPGG    GE  GLA LT K +F VF V N+ AF  S  AVL  FH +I+R  AR+ +KGVA   T+ +ILAM+LAFC G+YVVLTK
Subjt:  MLVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFH-SISR--ARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK

Query:  SSGLYVVPFLIPAFSVFLY
        S+ L V P+++ AF + LY
Subjt:  SSGLYVVPFLIPAFSVFLY

XP_022143169.1 ankyrin-2-like [Momordica charantia]1.5e-1951.11Show/hide
Query:  MLVATVTFAAGFTVPGG-LEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSI-------------SRARIFFKGVATFFTSVSILAMMLA
        MLVATVTFAAGFTVPGG +   GEDQGLA LT K AFKVF+VFNTLAF  S  AVLF  HS               + R+ +  +  FFT+V+ILA++LA
Subjt:  MLVATVTFAAGFTVPGG-LEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSI-------------SRARIFFKGVATFFTSVSILAMMLA

Query:  FCLGTYVVLTKSSGLYVVPFLIPAFSVFLYPTVYI
        F  GT+VVLT+S+GL         F V  +  V++
Subjt:  FCLGTYVVLTKSSGLYVVPFLIPAFSVFLYPTVYI

TrEMBL top hitse value%identityAlignment
A0A1S3C2T5 protein ACCELERATED CELL DEATH 6-like1.6e-1750Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSI---SRARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTKS
        LVATVTFAAGF++PGG     E+ GL+ L+NK  FKVF++FNT+AF  S  AVL HFH+       R+ + G+A  FTS++I+AM++AF  GTYVV+  +
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSI---SRARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTKS

Query:  SGLYVVPFLIPAFSVFLY
            + PFLI     FLY
Subjt:  SGLYVVPFLIPAFSVFLY

A0A1S3CEI0 ankyrin repeat-containing protein At5g02620-like8.3e-1950.85Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSIS----RARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK
        LVATVTF AG  +PGGLEDKGED GLA LT+K AFK F++FN+LAF SS   V FHF + +      R+ +K     FT+  +  M+ AFC G+YV+LTK
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSIS----RARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK

Query:  SSGLYVVPFLIPAFSVFL
         +GL +VP ++ A  +F+
Subjt:  SSGLYVVPFLIPAFSVFL

A0A5A7V8Q8 Ankyrin repeat-containing protein1.7e-1951.69Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSIS----RARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK
        LVATVTF AG  +PGGLEDKGED GLA LT+K AFK F++FN+LAF SS   V FHF + +      R+ +K     FT+  +  M+ AFC G+YV+LTK
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSIS----RARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK

Query:  SSGLYVVPFLIPAFSVFL
        S+GL +VP ++ A  +F+
Subjt:  SSGLYVVPFLIPAFSVFL

A0A6J1CNI9 ankyrin-2-like7.5e-2051.11Show/hide
Query:  MLVATVTFAAGFTVPGG-LEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSI-------------SRARIFFKGVATFFTSVSILAMMLA
        MLVATVTFAAGFTVPGG +   GEDQGLA LT K AFKVF+VFNTLAF  S  AVLF  HS               + R+ +  +  FFT+V+ILA++LA
Subjt:  MLVATVTFAAGFTVPGG-LEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSI-------------SRARIFFKGVATFFTSVSILAMMLA

Query:  FCLGTYVVLTKSSGLYVVPFLIPAFSVFLYPTVYI
        F  GT+VVLT+S+GL         F V  +  V++
Subjt:  FCLGTYVVLTKSSGLYVVPFLIPAFSVFLYPTVYI

A0A6J1CQ03 ankyrin repeat-containing protein At5g02620-like4.7e-2258.82Show/hide
Query:  MLVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFH-SISR--ARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK
        MLVATVTFAAGFTVPGG    GE  GLA LT K +F VF V N+ AF  S  AVL  FH +I+R  AR+ +KGVA   T+ +ILAM+LAFC G+YVVLTK
Subjt:  MLVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFH-SISR--ARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTK

Query:  SSGLYVVPFLIPAFSVFLY
        S+ L V P+++ AF + LY
Subjt:  SSGLYVVPFLIPAFSVFLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03670.1 ankyrin repeat family protein2.7e-0636.44Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVL-FHFHSISRARIFFKG--VATFFTSVSILAMMLAFCLGTYVVLTKS
        LVATVTFAAG T+PGG        G+A L NK  FKVFL+ N +A  +S + V+   +  +  A +  K   +A      ++++MM+A   G  +V++  
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVL-FHFHSISRARIFFKG--VATFFTSVSILAMMLAFCLGTYVVLTKS

Query:  SGL-YVVPFLIPAFSVFL
          L ++V  +  AF VFL
Subjt:  SGL-YVVPFLIPAFSVFL

AT4G03450.1 Ankyrin repeat family protein1.0e-0533.33Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHS-----ISRARIFFKGVATFFTSVSILAMMLAFCLGTYVVLT
        LVATV FAAG  +PGG       +G+A L +     +FLVFNTLA  SS LA++    +     +   + F   +   F  VS+++M  AF  G  VV T
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHS-----ISRARIFFKGVATFFTSVSILAMMLAFCLGTYVVLT

Query:  KSSGLYVVPFLIPAFSVFLYPTVYII
             ++   +I    +FL+   Y++
Subjt:  KSSGLYVVPFLIPAFSVFLYPTVYII

AT4G03460.1 Ankyrin repeat family protein3.8e-0836.75Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVL-FHFHSISRARIFFK--GVATFFTSVSILAMMLAFCLGTYVVLTKS
        LVAT+TF AGFT+PGG      + G+ATL  K AF+VFLVF+TLA   S + ++   +  +    +  K   +A     +++ +M +AF  GTY  +   
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVL-FHFHSISRARIFFK--GVATFFTSVSILAMMLAFCLGTYVVLTKS

Query:  SGLYVVPFLIPAFSVFL
         GL +V  L  ++  FL
Subjt:  SGLYVVPFLIPAFSVFL

AT4G03480.1 Ankyrin repeat family protein1.3e-0851.85Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVL
        LVATVTFAAGFT+PGG      + G+ATL + +    FLV +TLA  SS +A++
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVL

AT4G03500.1 Ankyrin repeat family protein2.6e-0939.8Show/hide
Query:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVL-FHFHSISRARIFFK--GVATFFTSVSILAMMLAFCLGTYVVLT
        LVAT+TF AGFT+PGG  D     G+A L  + AF+VFLV +TLA  SS + ++   +  +    I  K   +A  F  +++ +M +AF  GTYV ++
Subjt:  LVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVL-FHFHSISRARIFFK--GVATFFTSVSILAMMLAFCLGTYVVLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGTGGCGACAGTGACATTCGCGGCAGGATTCACAGTGCCTGGTGGGTTGGAGGATAAAGGAGAAGACCAAGGCTTAGCCACACTGACCAACAAAGCAGCTTTCAA
GGTGTTCCTAGTTTTCAACACTTTGGCATTTTCTAGCTCCACTTTGGCAGTGCTTTTCCATTTCCACTCCATATCACGTGCTCGAATCTTTTTCAAAGGGGTTGCAACAT
TCTTCACCAGTGTTTCAATTTTGGCCATGATGTTGGCCTTTTGCCTCGGCACTTACGTTGTGCTTACAAAATCATCCGGACTCTATGTGGTTCCCTTTCTTATACCGGCT
TTTTCTGTCTTTCTCTACCCTACCGTTTATATTATCACCGGTGTTATTAAGCAGTACTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGTGGCGACAGTGACATTCGCGGCAGGATTCACAGTGCCTGGTGGGTTGGAGGATAAAGGAGAAGACCAAGGCTTAGCCACACTGACCAACAAAGCAGCTTTCAA
GGTGTTCCTAGTTTTCAACACTTTGGCATTTTCTAGCTCCACTTTGGCAGTGCTTTTCCATTTCCACTCCATATCACGTGCTCGAATCTTTTTCAAAGGGGTTGCAACAT
TCTTCACCAGTGTTTCAATTTTGGCCATGATGTTGGCCTTTTGCCTCGGCACTTACGTTGTGCTTACAAAATCATCCGGACTCTATGTGGTTCCCTTTCTTATACCGGCT
TTTTCTGTCTTTCTCTACCCTACCGTTTATATTATCACCGGTGTTATTAAGCAGTACTTTTAG
Protein sequenceShow/hide protein sequence
MLVATVTFAAGFTVPGGLEDKGEDQGLATLTNKAAFKVFLVFNTLAFSSSTLAVLFHFHSISRARIFFKGVATFFTSVSILAMMLAFCLGTYVVLTKSSGLYVVPFLIPA
FSVFLYPTVYIITGVIKQYF