; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018291 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018291
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr5:21686565..21687199
RNA-Seq ExpressionLag0018291
SyntenyLag0018291
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4361328.1 hypothetical protein G4B88_015920 [Cannabis sativa]4.1e-0942.19Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS
        +++PSK+++FVW+ F+NAIP+   L   H+     CP+ +++ ET  HALF C RA E+W + S
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS

KAF4368669.1 hypothetical protein F8388_003370 [Cannabis sativa]4.1e-0942.19Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS
        +++PSK+++FVW+ F+NAIP+   L   H+     CP+ +++ ET  HALF C RA E+W + S
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS

KAF5478058.1 hypothetical protein F2P56_004648, partial [Juglans regia]1.4e-0932.45Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQ--YDIKDDYWKVNPKGDAYSMTID--
        M VPS+VKVF WR+  N +P   NL+     +   C   +E+ E TDHAL  CK A E+W  + P +  D S++   DI          GD   + +   
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQ--YDIKDDYWKVNPKGDAYSMTID--

Query:  DVC-----------CLISQCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNV
         VC            L S+     L+ D A       +GVG++LRD +G V
Subjt:  DVC-----------CLISQCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNV

XP_030486845.1 uncharacterized protein LOC115703751 [Cannabis sativa]3.3e-1132.03Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQYDIKDDYWKVNP--KGDAYSMTIDDV
        + +PSKV++F+WR+  + +P    L + H+ +  ICP+ Q + E+  HALF C R  +IW+  S S+ + L  +        K  P     + SMT  D 
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQYDIKDDYWKVNP--KGDAYSMTIDDV

Query:  CCLISQCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNVQVAKSLCSSVYTSLK
          L     +  L+TDAA  +    +G G VLRD  G++  A S     +  LK
Subjt:  CCLISQCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNVQVAKSLCSSVYTSLK

XP_035543624.1 uncharacterized protein LOC118347700 [Juglans regia]1.4e-0932.45Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQ--YDIKDDYWKVNPKGDAYSMTID--
        M VPS+VKVF WR+  N +P   NL+     +   C   +E+ E TDHAL  CK A E+W  + P +  D S++   DI          GD   + +   
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQ--YDIKDDYWKVNPKGDAYSMTID--

Query:  DVC-----------CLISQCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNV
         VC            L S+     L+ D A       +GVG++LRD +G V
Subjt:  DVC-----------CLISQCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNV

TrEMBL top hitse value%identityAlignment
A0A6P9E857 uncharacterized protein LOC1183477006.8e-1032.45Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQ--YDIKDDYWKVNPKGDAYSMTID--
        M VPS+VKVF WR+  N +P   NL+     +   C   +E+ E TDHAL  CK A E+W  + P +  D S++   DI          GD   + +   
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQ--YDIKDDYWKVNPKGDAYSMTID--

Query:  DVC-----------CLISQCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNV
         VC            L S+     L+ D A       +GVG++LRD +G V
Subjt:  DVC-----------CLISQCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNV

A0A7J6ESF6 zf-RVT domain-containing protein2.0e-0942.19Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS
        +++PSK+++FVW+ F+NAIP+   L   H+     CP+ +++ ET  HALF C RA E+W + S
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS

A0A7J6FFK9 zf-RVT domain-containing protein2.0e-0942.19Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS
        +++PSK+++FVW+ F+NAIP+   L   H+     CP+ +++ ET  HALF C RA E+W + S
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS

A0A803NJJ8 Uncharacterized protein2.0e-0942.19Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS
        +++PSK+++FVW+ F+NAIP+   L   H+     CP+ +++ ET  HALF C RA E+W + S
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIIS

A0A803QFU0 Uncharacterized protein2.0e-0927.33Show/hide
Query:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACE----------IWEIISPSMVSDLSYQYDIKDDYWKVNPKG--
        +++PSK+++FVW+ F+N +P+   L   H+ +  +CP+ + + ET +HALF C RA E          + ++ +  +V    Y    +  +      G  
Subjt:  MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACE----------IWEIISPSMVSDLSYQYDIKDDYWKVNPKG--

Query:  ---DAYSMTIDDVCCLIS-----QCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNVQVAKS
           + +   I  V  L          +  L+TDAA  R     G+G VLRD  G ++ A S
Subjt:  ---DAYSMTIDDVCCLIS-----QCEEFILHTDAAFRRDTSTSGVGLVLRDKQGNVQVAKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTCCCAGTAAGGTGAAGGTATTTGTGTGGCGATCCTTCTATAATGCAATTCCAATAAAGGTCAATCTTCGAAACCATCATGTTCCTGAAATTGGCATCTGCCC
AATTTTCCAGGAGGAGCTAGAAACTACGGACCATGCTCTATTTCAGTGTAAAAGAGCTTGCGAGATATGGGAGATAATTTCACCGTCGATGGTTTCAGATTTGTCGTACC
AATACGATATTAAGGATGATTATTGGAAAGTCAATCCAAAGGGTGATGCATATTCTATGACTATAGATGATGTCTGTTGTCTGATATCACAATGTGAAGAGTTTATTTTA
CATACCGATGCAGCTTTTAGGCGAGATACAAGTACAAGTGGAGTTGGGCTTGTTCTGCGAGATAAACAGGGTAATGTTCAAGTAGCAAAGTCGTTATGCTCATCAGTTTA
TACATCCCTTAAGGGTGGAAGCAGTAGCAGTGCTCGAAGGCCTTCGTATGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTCCCAGTAAGGTGAAGGTATTTGTGTGGCGATCCTTCTATAATGCAATTCCAATAAAGGTCAATCTTCGAAACCATCATGTTCCTGAAATTGGCATCTGCCC
AATTTTCCAGGAGGAGCTAGAAACTACGGACCATGCTCTATTTCAGTGTAAAAGAGCTTGCGAGATATGGGAGATAATTTCACCGTCGATGGTTTCAGATTTGTCGTACC
AATACGATATTAAGGATGATTATTGGAAAGTCAATCCAAAGGGTGATGCATATTCTATGACTATAGATGATGTCTGTTGTCTGATATCACAATGTGAAGAGTTTATTTTA
CATACCGATGCAGCTTTTAGGCGAGATACAAGTACAAGTGGAGTTGGGCTTGTTCTGCGAGATAAACAGGGTAATGTTCAAGTAGCAAAGTCGTTATGCTCATCAGTTTA
TACATCCCTTAAGGGTGGAAGCAGTAGCAGTGCTCGAAGGCCTTCGTATGGCTAA
Protein sequenceShow/hide protein sequence
MRVPSKVKVFVWRSFYNAIPIKVNLRNHHVPEIGICPIFQEELETTDHALFQCKRACEIWEIISPSMVSDLSYQYDIKDDYWKVNPKGDAYSMTIDDVCCLISQCEEFIL
HTDAAFRRDTSTSGVGLVLRDKQGNVQVAKSLCSSVYTSLKGGSSSSARRPSYG