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Lag0018299 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018299
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:22190968..22191447
RNA-Seq ExpressionLag0018299
SyntenyLag0018299
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.7e-2339.16Show/hide
Query:  MRRNFKEAWNIP-NDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR
        ++   K AW +     +V+ +G N+FLF+     ++ RI+R GPW FD+  L+++  P+ + KP  M+F++V  WVHF +L +   N +MA RLGNAIG 
Subjt:  MRRNFKEAWNIP-NDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR

Query:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG
        F + +++      W   LRVRV  D+ KP+ +GIK+ LD P G
Subjt:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.8e-2846.67Show/hide
Query:  AWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRFVEYDNDG
        AW + + L VE +G NLFLF    E +  R+++ GPW FDK  L+VL KP      + +EF  V FW+H  +LP+   N +MA RLGNAIG FV+ D + 
Subjt:  AWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRFVEYDNDG

Query:  GRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG
         +G  W  SLR+RV++DI+KP+R+GIK+ +D P G
Subjt:  GRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.1e-2643.36Show/hide
Query:  MRRNFKEAWNIPND-LAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR
        M+   + AW + N+   V+ LG NLFLFS    +++ +I + GPW FD+  L++++KP+ ++ P+ ++F  +P WV F +LP+      MA RLGNA+G 
Subjt:  MRRNFKEAWNIPND-LAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR

Query:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG
        F E D D      W  +LRVRV+LDISKP+R+GIK+ LD P G
Subjt:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.4e-2237.23Show/hide
Query:  MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRF
        M+      W     + V  +G NLF+F     V++ R++  GPW FD K+LL+L +  P V+P+ ++   V FWVH C LP+ + N  + + +GNA+G+F
Subjt:  MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRF

Query:  VEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKL
        ++ D + G G+ W  ++R+RV LD+ KP+R+G+K+ L
Subjt:  VEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKL

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]2.4e-2236.5Show/hide
Query:  MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRF
        M+      W     + V  +G NLF+F     V++ R++  GPW FD K+LL+L +  P V+P+ ++   V FWVH C LP+ + N  +   +GNA+G+F
Subjt:  MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRF

Query:  VEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKL
        ++ D + G G+ W  ++R+RV +D+ KP+R+G+K+ L
Subjt:  VEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKL

TrEMBL top hitse value%identityAlignment
A0A0K9RJT4 CCHC-type domain-containing protein2.0e-1936.03Show/hide
Query:  MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPI-PMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR
        M+R     W    ++A+  + +NLF+F    E ++ R+I   PW FD K  LV SK I    +P+ + FK+ PFW+   ++P +  N S+A  +G  +G 
Subjt:  MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPI-PMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR

Query:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKV
        F+EYD+     LGW+  +R++V+LD+ KP+R+G+K+
Subjt:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKV

A0A6J1BSZ1 uncharacterized protein LOC1110054818.0e-2439.16Show/hide
Query:  MRRNFKEAWNIP-NDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR
        ++   K AW +     +V+ +G N+FLF+     ++ RI+R GPW FD+  L+++  P+ + KP  M+F++V  WVHF +L +   N +MA RLGNAIG 
Subjt:  MRRNFKEAWNIP-NDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR

Query:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG
        F + +++      W   LRVRV  D+ KP+ +GIK+ LD P G
Subjt:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG

A0A6J1DU55 uncharacterized protein LOC1110231351.8e-2846.67Show/hide
Query:  AWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRFVEYDNDG
        AW + + L VE +G NLFLF    E +  R+++ GPW FDK  L+VL KP      + +EF  V FW+H  +LP+   N +MA RLGNAIG FV+ D + 
Subjt:  AWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRFVEYDNDG

Query:  GRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG
         +G  W  SLR+RV++DI+KP+R+GIK+ +D P G
Subjt:  GRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG

A0A6J1DX30 uncharacterized protein LOC1110248741.0e-2643.36Show/hide
Query:  MRRNFKEAWNIPND-LAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR
        M+   + AW + N+   V+ LG NLFLFS    +++ +I + GPW FD+  L++++KP+ ++ P+ ++F  +P WV F +LP+      MA RLGNA+G 
Subjt:  MRRNFKEAWNIPND-LAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGR

Query:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG
        F E D D      W  +LRVRV+LDISKP+R+GIK+ LD P G
Subjt:  FVEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKVKLDEPNG

A0A803LK12 Uncharacterized protein1.2e-1937.78Show/hide
Query:  MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRF
        M+R  K  W + +D+AV  + +NLF+F    E ++ R++   PW FDK+ +L+L       +P+ + F++ PFWV   ++     N + A  +G+A+G F
Subjt:  MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRF

Query:  VEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKV
        +EYD +    LGW E +R++V+LDI+KP+R+GIKV
Subjt:  VEYDNDGGRGLGWKESLRVRVILDISKPVRKGIKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAGAAATTTCAAGGAGGCGTGGAACATTCCCAACGACCTTGCTGTGGAAAAGTTGGGTGCAAATCTATTCCTCTTTTCTCTAAAATTTGAGGTGGAACAAGGCCG
AATCATCCGACAGGGGCCGTGGTTATTCGACAAGAAGTATCTTTTGGTCCTCTCCAAACCGATCCCGATGGTGAAACCAACTGCAATGGAGTTCAAGGATGTGCCTTTTT
GGGTTCATTTTTGTGAACTTCCTATAGATATATACAATCACTCAATGGCAGACAGGCTTGGAAATGCTATTGGGCGCTTTGTAGAATATGACAACGACGGAGGCAGGGGT
CTCGGTTGGAAAGAAAGTCTTAGGGTCAGAGTTATTTTGGATATCTCCAAACCAGTTCGCAAGGGCATCAAAGTCAAGCTTGATGAGCCAAATGGACGCCCATCAGATAT
GAGAAGCTCTCGGAATTATGCACCTTTTGTGGCCGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGAGAAATTTCAAGGAGGCGTGGAACATTCCCAACGACCTTGCTGTGGAAAAGTTGGGTGCAAATCTATTCCTCTTTTCTCTAAAATTTGAGGTGGAACAAGGCCG
AATCATCCGACAGGGGCCGTGGTTATTCGACAAGAAGTATCTTTTGGTCCTCTCCAAACCGATCCCGATGGTGAAACCAACTGCAATGGAGTTCAAGGATGTGCCTTTTT
GGGTTCATTTTTGTGAACTTCCTATAGATATATACAATCACTCAATGGCAGACAGGCTTGGAAATGCTATTGGGCGCTTTGTAGAATATGACAACGACGGAGGCAGGGGT
CTCGGTTGGAAAGAAAGTCTTAGGGTCAGAGTTATTTTGGATATCTCCAAACCAGTTCGCAAGGGCATCAAAGTCAAGCTTGATGAGCCAAATGGACGCCCATCAGATAT
GAGAAGCTCTCGGAATTATGCACCTTTTGTGGCCGTATAG
Protein sequenceShow/hide protein sequence
MRRNFKEAWNIPNDLAVEKLGANLFLFSLKFEVEQGRIIRQGPWLFDKKYLLVLSKPIPMVKPTAMEFKDVPFWVHFCELPIDIYNHSMADRLGNAIGRFVEYDNDGGRG
LGWKESLRVRVILDISKPVRKGIKVKLDEPNGRPSDMRSSRNYAPFVAV