; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018307 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018307
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPseudouridylate synthase 7-like protein isoform X1
Genome locationchr5:22533104..22539729
RNA-Seq ExpressionLag0018307
SyntenyLag0018307
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031952.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.3e-0445.59Show/hide
Query:  KENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESL
        KEN+CGFIP  I++ D    NI L FG I+     SK     G+L   +F+NS+D+ R++QVM+DE L
Subjt:  KENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESL

TYK02778.1 hypothetical protein E5676_scaffold145G00370 [Cucumis melo var. makuwa]2.9e-0550Show/hide
Query:  SSWMSITKIWQQFDSLAHFNLGNGKKIRFWEVPWLNGLALKLSFPR
        S W+SI K+W+  DSLA FNLGNG++I FW  PW+    +K  + R
Subjt:  SSWMSITKIWQQFDSLAHFNLGNGKKIRFWEVPWLNGLALKLSFPR

TYK16775.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-0539.39Show/hide
Query:  AHFNLGNGKKIRFWEVPWLNGLALKLSFPRFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESL
        AHF  G  + I F  + ++N    K+   + KEN+CGFIP  I++ D    NI L FG I+     SK     G+L   +F+NS+D+ R++QVM+DE L
Subjt:  AHFNLGNGKKIRFWEVPWLNGLALKLSFPRFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESL

XP_038878804.1 uncharacterized protein LOC120070945 isoform X8 [Benincasa hispida]7.3e-0451.02Show/hide
Query:  SLCSSWMSITKIWQQFDSLAHFNLGNGKKIRFWEVPWLNGLALKLSFPR
        SL S  +SI++IW Q++S A FN+G G++IRFW   W    +LK+SFPR
Subjt:  SLCSSWMSITKIWQQFDSLAHFNLGNGKKIRFWEVPWLNGLALKLSFPR

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]4.3e-0442.25Show/hide
Query:  RFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESLF
        + KEN+CGF+P  I+V +    +I L FGDI+T    SK +   G+L   DFTN +DL R+N+V   E ++
Subjt:  RFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESLF

TrEMBL top hitse value%identityAlignment
A0A5A7SLN9 Retrotransposable element Tf22.1e-0445.59Show/hide
Query:  KENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESL
        KEN+CGFIP  I++ D    NI L FG I+     SK     G+L   +F+NS+D+ R++QVM+DE L
Subjt:  KENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESL

A0A5D3BUW5 Uncharacterized protein1.4e-0550Show/hide
Query:  SSWMSITKIWQQFDSLAHFNLGNGKKIRFWEVPWLNGLALKLSFPR
        S W+SI K+W+  DSLA FNLGNG++I FW  PW+    +K  + R
Subjt:  SSWMSITKIWQQFDSLAHFNLGNGKKIRFWEVPWLNGLALKLSFPR

A0A5D3CZ35 DNA/RNA polymerases superfamily protein8.4e-0639.39Show/hide
Query:  AHFNLGNGKKIRFWEVPWLNGLALKLSFPRFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESL
        AHF  G  + I F  + ++N    K+   + KEN+CGFIP  I++ D    NI L FG I+     SK     G+L   +F+NS+D+ R++QVM+DE L
Subjt:  AHFNLGNGKKIRFWEVPWLNGLALKLSFPRFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESL

A0A5D3DY86 Uncharacterized protein3.5e-0442.31Show/hide
Query:  EGFSLCSSWMSITKIWQQFDSLAHFNLGNGKKIRFWEVPWLNGLALKLSFPR
        E   L SSW+SI++ W++ ++LA F +GNG ++ FW  PWL+ + L    PR
Subjt:  EGFSLCSSWMSITKIWQQFDSLAHFNLGNGKKIRFWEVPWLNGLALKLSFPR

A0A5D3DYX0 Pseudouridylate synthase 7-like protein isoform X14.6e-0440Show/hide
Query:  RFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESLFLPNEDDLMMVIEDS
        + K N+CGF+P  I++ D N     L +GDI  L  S K +   G+L  +DF N +DL RV QVM+DE    P  D     I+D+
Subjt:  RFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESLFLPNEDDLMMVIEDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTTTCCTCTTCGATTTGGAGGATTTATTGCCTACCCCTATTCACGATCAGATTTCTGTATTGGAGGAAAATAATGCAGTTGGTTTGGCCAATTTATCCCCAGT
AAATGACTCAACTTCTCGTAAAAAGGATAAGGAAGTTGTCTCTAAAGTTCAATTGAATGCTTGTGATGTTTTGGCAACACCTATAGTTTCTGTTCCAAGCAAATTTTCCT
CACTTATCGAAGGTTTTAGCCTCTGTAGTTCTTGGATGTCCATTACTAAAATTTGGCAACAGTTTGATTCACTTGCTCACTTCAATTTGGGTAATGGAAAGAAAATTCGA
TTTTGGGAAGTTCCTTGGTTGAATGGTTTAGCATTAAAGCTCAGTTTTCCTCGATTTAAGGAAAACATTTGTGGCTTCATCCCAACAGAGATTGATGTCAAAGATGGGAA
TATCATAAATATTTCTCTCCGTTTTGGTGATATAACAACTCTTGCCCTTTCAAGTAAGTGTCGTATGAATCATGGAAATTTATCCCCTCAAGATTTTACAAATTCAGTGG
ATTTAAAGAGGGTTAATCAGGTTATGGAAGATGAAAGTCTCTTTTTACCAAATGAAGATGATTTGATGATGGTTATCGAGGATTCAAAGTTGGAGTCTCCCACGAAAGGT
TCTAAGGTGCAAGAGACTTTATACTCTGTCACGAGCTTTAGTCAATCACAAGTCTCTCTTCCTAGTTCAAACATACTATCCACCAAGGGTGTAACAAGTCTCTCTTCACC
TAAGAAGAATCATTATTGTTTTGATTCTGATGGAGAATTGGATGTTAGTATGAGTAGTGCCAATAAGGAAAACATTTGTGGCTTCATCCCAACAGAGATTGATGTCAAAG
ATGGGAATATCATAAATATTTCTCTCCGTTTTGGTGATATAACAACTCTTGCCCTTTCAAGTAAGTGTCGTATGAATCATGGAAATTTATCCCCTCAAGATTTTACAAAT
TCAGTGGATTTAAAGAGGGTTAATCAGGTTATGGAAGATGAAAGTCTCTTTTTACCAAATGAAGATGATTTGATGATGGTTATCGAGGATTCAAAGTTGGAGTCTCCCAC
GAAAGGTTCTAAGGTGCAAGAGACTTTATACTCTGTCACGAGCTTTAGTCAATCACAAGTCTCTCTTCCTAGTTCAAACATACTATCCACCAAGGGTGTAACAAGTCTCT
CTTCACCTAAGAAGAATCATTATTGTTTTGATTCTGATGGAGAATTGGATGTTAGTATGAGTAGTGCCAAGGAAGGTCCACGTGGAGAATGTTATCCAATCAGCCCTGAA
TTCAATGTAGAAGCCATGATGTGTATACTTGCACGTCACCTCTTCTTGGACAGCAAGTCAGGACAGCGTCGAGACGCTAGGGGACAGCATCACGACGCTGTCCTATTTCC
AGAATGTTCCAGGCGCGGTTTTGAGCTGAAATTCGGGCCTCCCTCCATTCTTTTGACCCAAATACTTTACATGATGGATCTTGGGCTCTTTCCTCCTGACCCAATTGATC
TTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTTTCCTCTTCGATTTGGAGGATTTATTGCCTACCCCTATTCACGATCAGATTTCTGTATTGGAGGAAAATAATGCAGTTGGTTTGGCCAATTTATCCCCAGT
AAATGACTCAACTTCTCGTAAAAAGGATAAGGAAGTTGTCTCTAAAGTTCAATTGAATGCTTGTGATGTTTTGGCAACACCTATAGTTTCTGTTCCAAGCAAATTTTCCT
CACTTATCGAAGGTTTTAGCCTCTGTAGTTCTTGGATGTCCATTACTAAAATTTGGCAACAGTTTGATTCACTTGCTCACTTCAATTTGGGTAATGGAAAGAAAATTCGA
TTTTGGGAAGTTCCTTGGTTGAATGGTTTAGCATTAAAGCTCAGTTTTCCTCGATTTAAGGAAAACATTTGTGGCTTCATCCCAACAGAGATTGATGTCAAAGATGGGAA
TATCATAAATATTTCTCTCCGTTTTGGTGATATAACAACTCTTGCCCTTTCAAGTAAGTGTCGTATGAATCATGGAAATTTATCCCCTCAAGATTTTACAAATTCAGTGG
ATTTAAAGAGGGTTAATCAGGTTATGGAAGATGAAAGTCTCTTTTTACCAAATGAAGATGATTTGATGATGGTTATCGAGGATTCAAAGTTGGAGTCTCCCACGAAAGGT
TCTAAGGTGCAAGAGACTTTATACTCTGTCACGAGCTTTAGTCAATCACAAGTCTCTCTTCCTAGTTCAAACATACTATCCACCAAGGGTGTAACAAGTCTCTCTTCACC
TAAGAAGAATCATTATTGTTTTGATTCTGATGGAGAATTGGATGTTAGTATGAGTAGTGCCAATAAGGAAAACATTTGTGGCTTCATCCCAACAGAGATTGATGTCAAAG
ATGGGAATATCATAAATATTTCTCTCCGTTTTGGTGATATAACAACTCTTGCCCTTTCAAGTAAGTGTCGTATGAATCATGGAAATTTATCCCCTCAAGATTTTACAAAT
TCAGTGGATTTAAAGAGGGTTAATCAGGTTATGGAAGATGAAAGTCTCTTTTTACCAAATGAAGATGATTTGATGATGGTTATCGAGGATTCAAAGTTGGAGTCTCCCAC
GAAAGGTTCTAAGGTGCAAGAGACTTTATACTCTGTCACGAGCTTTAGTCAATCACAAGTCTCTCTTCCTAGTTCAAACATACTATCCACCAAGGGTGTAACAAGTCTCT
CTTCACCTAAGAAGAATCATTATTGTTTTGATTCTGATGGAGAATTGGATGTTAGTATGAGTAGTGCCAAGGAAGGTCCACGTGGAGAATGTTATCCAATCAGCCCTGAA
TTCAATGTAGAAGCCATGATGTGTATACTTGCACGTCACCTCTTCTTGGACAGCAAGTCAGGACAGCGTCGAGACGCTAGGGGACAGCATCACGACGCTGTCCTATTTCC
AGAATGTTCCAGGCGCGGTTTTGAGCTGAAATTCGGGCCTCCCTCCATTCTTTTGACCCAAATACTTTACATGATGGATCTTGGGCTCTTTCCTCCTGACCCAATTGATC
TTTAA
Protein sequenceShow/hide protein sequence
METFLFDLEDLLPTPIHDQISVLEENNAVGLANLSPVNDSTSRKKDKEVVSKVQLNACDVLATPIVSVPSKFSSLIEGFSLCSSWMSITKIWQQFDSLAHFNLGNGKKIR
FWEVPWLNGLALKLSFPRFKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTNSVDLKRVNQVMEDESLFLPNEDDLMMVIEDSKLESPTKG
SKVQETLYSVTSFSQSQVSLPSSNILSTKGVTSLSSPKKNHYCFDSDGELDVSMSSANKENICGFIPTEIDVKDGNIINISLRFGDITTLALSSKCRMNHGNLSPQDFTN
SVDLKRVNQVMEDESLFLPNEDDLMMVIEDSKLESPTKGSKVQETLYSVTSFSQSQVSLPSSNILSTKGVTSLSSPKKNHYCFDSDGELDVSMSSAKEGPRGECYPISPE
FNVEAMMCILARHLFLDSKSGQRRDARGQHHDAVLFPECSRRGFELKFGPPSILLTQILYMMDLGLFPPDPIDL