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Lag0018309 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018309
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr5:22603027..22604575
RNA-Seq ExpressionLag0018309
SyntenyLag0018309
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026042.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-0851.16Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R+G+ LSKE CP+T QEVEDMR + YA   SV    +  L +R  +     I+    YTD+D  TDKD  KSTS SVFTLNG A+V
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

KAA0053090.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-0845.16Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSIL--GER-----GYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R+G+ LSKE CP+T QEVE+MRH+ YA  +     +F   I +   RT   +L  G +     GYTD+D  T++D  KSTS  VFTLN  A+V
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSIL--GER-----GYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

TYK00851.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-0952.33Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R GI LSKE CP+T QEVEDM ++SYA  +  S  + +D +    L   S +L   GYTD+D  TDKD+ KS S S+FTLNG AIV
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

TYK11956.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-0850Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R+G+ LSKE CP+T QEV++MRH+SYA  +  S  + +D +    L   S  L   GYTD+D  TDK+  K TS SVFTLNG A+V
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

TYK29949.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-0845.16Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSIL--GER-----GYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R+G+ LSKE CP+T QEVE+MRH+ YA  +     +F   I +   RT   +L  G +     GYTD+D  T++D  KSTS  VFTLN  A+V
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSIL--GER-----GYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

TrEMBL top hitse value%identityAlignment
A0A5A7SLM0 Gag/pol protein1.9e-0851.16Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R+G+ LSKE CP+T QEVEDMR + YA   SV    +  L +R  +     I+    YTD+D  TDKD  KSTS SVFTLNG A+V
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

A0A5A7UCZ8 Gag/pol protein3.2e-0845.16Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSIL--GER-----GYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R+G+ LSKE CP+T QEVE+MRH+ YA  +     +F   I +   RT   +L  G +     GYTD+D  T++D  KSTS  VFTLN  A+V
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSIL--GER-----GYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

A0A5D3BM03 Gag/pol protein9.9e-1052.33Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R GI LSKE CP+T QEVEDM ++SYA  +  S  + +D +    L   S +L   GYTD+D  TDKD+ KS S S+FTLNG AIV
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

A0A5D3CNE5 Gag/pol protein6.4e-0950Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R+G+ LSKE CP+T QEV++MRH+SYA  +  S  + +D +    L   S  L   GYTD+D  TDK+  K TS SVFTLNG A+V
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

A0A5D3E2F0 Gag/pol protein3.2e-0845.16Show/hide
Query:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSIL--GER-----GYTDTDVLTDKDLMKSTSVSVFTLNGEAIV
        R+G+ LSKE CP+T QEVE+MRH+ YA  +     +F   I +   RT   +L  G +     GYTD+D  T++D  KSTS  VFTLN  A+V
Subjt:  RNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSIL--GER-----GYTDTDVLTDKDLMKSTSVSVFTLNGEAIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCGGCCCAAAACACGTCCAGGCCGCATAAAACGCGTAGAACCAGTGAGACCCGGTCAAAACTTGGTGAATCGGGTTGAACCGCACTCCATCTACCCAAACCGGAC
CGAACCGCGTGAAATGATAAGGAATGGAATTCTTCTGTCTAAGGAACTGTGTCCTCAAACACTTCAAGAAGTTGAGGACATGAGACATATGTCGTATGCAGTAGGGTTGT
CAGTGAGTTTCAATCAATTCCAGGATTTGATCTCTAGAGTGTCGTTACGTACATCCTCCAGTATCTTAGGAGAACGAGGATACACTGACACAGATGTTTTAACTGATAAG
GATTTGATGAAATCTACATCAGTGTCTGTCTTCACTCTTAATGGAGAAGCTATAGTACGAGTTATCTGCAGTCTCGACCATATAGGCCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCGGCCCAAAACACGTCCAGGCCGCATAAAACGCGTAGAACCAGTGAGACCCGGTCAAAACTTGGTGAATCGGGTTGAACCGCACTCCATCTACCCAAACCGGAC
CGAACCGCGTGAAATGATAAGGAATGGAATTCTTCTGTCTAAGGAACTGTGTCCTCAAACACTTCAAGAAGTTGAGGACATGAGACATATGTCGTATGCAGTAGGGTTGT
CAGTGAGTTTCAATCAATTCCAGGATTTGATCTCTAGAGTGTCGTTACGTACATCCTCCAGTATCTTAGGAGAACGAGGATACACTGACACAGATGTTTTAACTGATAAG
GATTTGATGAAATCTACATCAGTGTCTGTCTTCACTCTTAATGGAGAAGCTATAGTACGAGTTATCTGCAGTCTCGACCATATAGGCCAATAA
Protein sequenceShow/hide protein sequence
MNRPKTRPGRIKRVEPVRPGQNLVNRVEPHSIYPNRTEPREMIRNGILLSKELCPQTLQEVEDMRHMSYAVGLSVSFNQFQDLISRVSLRTSSSILGERGYTDTDVLTDK
DLMKSTSVSVFTLNGEAIVRVICSLDHIGQ