; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018317 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018317
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:22818904..22820066
RNA-Seq ExpressionLag0018317
SyntenyLag0018317
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]6.9e-6741.85Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NG+ +G + PSRGLRQGDPLSPYLFL+C EG SALL +  N S ++GL IAR  P ISHLFFADDS++FL+A+T    + + I   Y + SGQ +NFNK
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR-----------------------------
        S + FS N   + RS     L+M  + ++ +YLGLP +  + K   F+ + + VWA L  W+   FSQGG+                             
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR-----------------------------

Query:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL
                      +RK+HW+ W K+  PK   GL FR  + +NQA++AKQAWR+L  P   +S VL  KYF +SS LD+      S  W+  VWG  LL
Subjt:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL

Query:  KAGIRKNLGNGHSISLFLDPWLPRP
          G+R+ +GNG S   F DPWL RP
Subjt:  KAGIRKNLGNGHSISLFLDPWLPRP

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.5e-6948.23Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NG   G   PSRG+RQGDPLSPYLFLLC EGLSAL+    N+  L G+        I+HL FADDS+IFLR+   E  A + +L  Y +ASGQC+NF+K
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRRRKMHWKRWEKLCKPKELSGLNFRDLVAF
        S++LFS NV  E + YL  IL++ + +  G+YLGLPS F R +                          G  RK+HW +W ++C PKE  GLNFRDL  F
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRRRKMHWKRWEKLCKPKELSGLNFRDLVAF

Query:  NQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLFLDPWLPRP
        NQA++AK  WR L +P+L +S VL  KYF ++S+L A+    SS+FWKGF+WG +LL  G+R  +GNG +I  F DPWLPRP
Subjt:  NQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLFLDPWLPRP

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]3.5e-6342.15Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNSLV-GLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NG + G I PSRGLRQGDPLSP LFLLC EGLSAL+ +   N L+ G+SI RGCPK++HLFFADDS++F +AA  E    ++IL  YE+ASGQ +N +K
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNSLV-GLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR-----------------------------
        SS+ FS N A+ETR  + +IL    ++    YLGLPS+  R K++ F  L + V   L GWKG+  S GG+                             
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR-----------------------------

Query:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL
                        KM W  W+++C  K   GL FR+L AFN AM+AKQAWR+L NP+  +  VL  +YF    +L+A    S S+ W+     LE++
Subjt:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL

Query:  KAGIRKNLGNGHSISLFLDPWLPRP
        + G R  +GNG  I ++ D WLP P
Subjt:  KAGIRKNLGNGHSISLFLDPWLPRP

XP_030497896.1 uncharacterized protein LOC115713553 [Cannabis sativa]9.0e-6742.72Show/hide
Query:  NGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALL-VKVRNNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNKS
        NG+  G + P+RG+RQGDPLSPYLFLLC EGLS+L+  K RN SL+G  +AR  P +SHL FADDS +F  A+       K IL  YE+ASGQ VNF KS
Subjt:  NGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALL-VKVRNNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNKS

Query:  SVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR------------------------------
        S+ FS NV    ++ +SD L + + +S  +YLGLP    R K + F +L D VWA L  WK + FS+GG+                              
Subjt:  SVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR------------------------------

Query:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL
                      R K+HW+ W+KLCK K+  GL FR L+ FNQA++AKQAWR+   P+  +S +L  +Y+ NSS L++A   S SF W+   WG ELL
Subjt:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL

Query:  KAGIRKNLGNGHSISLFLDPWLP
        + G+   +GNG S S     W+P
Subjt:  KAGIRKNLGNGHSISLFLDPWLP

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]1.6e-6341.18Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNN-SLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NG+  G + PSRG+RQGDPLSPYLFL+C EGLS LL    NN SL GL ++R  P +SHLFFADDS++F RA      + + +L  Y +ASGQ VN +K
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNN-SLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRR----------------------------
          + FS N  +  ++Y   +L+M +      YLGLPS   R KTR F  + D +W LL  WK Q FS GG+                             
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRR----------------------------

Query:  ---------------RKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL
                         +HWK W  LCK K   GL FR+ + FNQA++AKQAWR+L +P+  +S +L  +YFL+ S+L A      S  W+  VWG ELL
Subjt:  ---------------RKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL

Query:  KAGIRKNLGNGHSISLFLDPWLP
          G+R  +G G  I+   DPWLP
Subjt:  KAGIRKNLGNGHSISLFLDPWLP

TrEMBL top hitse value%identityAlignment
A0A2N9EX83 Reverse transcriptase domain-containing protein2.2e-6641.23Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVR-NNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NGE  GF  P+RGLRQGDP+SPYLFLLC EGL+ALL K   +  + G+SI+RG PK+SHLFFADDS++F RA+  E  A + IL  YE+ASGQ +N +K
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVR-NNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRR----------------------------
        +++ FS +  EET++ + D L + V     +YLGLPS+  R K + F  L D VW  +QGWKG+  SQ GR                             
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRR----------------------------

Query:  ---------------RKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL
                       RK+HW  W  LCKPK++ G+ FR+L  FN A++AKQ WR+++N    +  VL  KYF  SS++D      +SF W+  +    ++
Subjt:  ---------------RKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL

Query:  KAGIRKNLGNGHSISLFLDPWLPRP
        + G R  +G G S+ ++ D WLP P
Subjt:  KAGIRKNLGNGHSISLFLDPWLPRP

A0A2N9ISH2 Reverse transcriptase domain-containing protein8.2e-6641.85Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNSLV-GLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NGE  G+I P+RGLRQGDPLSPYLFL+C EGLSALL K   +SL+ G+SI RG P+ISHLFFADDS+IF +A+    GA +TIL  Y  ASGQ VN +K
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNSLV-GLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR-----------------------------
        +++ FS N   + R  L+  +  +++T    YLGLP++  R K R F  + + +W  LQGWK +  SQ GR                             
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR-----------------------------

Query:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL
                       RK+HW   +KL K K+  G+ FRD+  FN+A++AKQAWR+L NP   +  +L  KYF ++S L+A    ++S+ W+       +L
Subjt:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL

Query:  KAGIRKNLGNGHSISLFLDPWLPRP
        KAG+R  +GNG  I ++ D WLP P
Subjt:  KAGIRKNLGNGHSISLFLDPWLPRP

A0A6J1DX30 uncharacterized protein LOC1110248741.2e-6948.23Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NG   G   PSRG+RQGDPLSPYLFLLC EGLSAL+    N+  L G+        I+HL FADDS+IFLR+   E  A + +L  Y +ASGQC+NF+K
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRRRKMHWKRWEKLCKPKELSGLNFRDLVAF
        S++LFS NV  E + YL  IL++ + +  G+YLGLPS F R +                          G  RK+HW +W ++C PKE  GLNFRDL  F
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRRRKMHWKRWEKLCKPKELSGLNFRDLVAF

Query:  NQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLFLDPWLPRP
        NQA++AK  WR L +P+L +S VL  KYF ++S+L A+    SS+FWKGF+WG +LL  G+R  +GNG +I  F DPWLPRP
Subjt:  NQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLFLDPWLPRP

A0A803NXV2 Uncharacterized protein1.4e-6843.69Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVR-NNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NG   G + PSRGLRQG PLSPYLFL C E LS+LL +   +  L+G   +R  P++SHLFFADDS+IF RA   E  + + IL  YE ASGQ VNF+K
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVR-NNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR-----------------------------
        S++ FS NV    R+ +  IL +    +   YLGLP+V  R K R F  + D V   ++GWK  FFS GGR                             
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGR-----------------------------

Query:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL
                      +RK+ W +WE +C+PK   GL F+DLV FNQAM+AKQ WR++ +PH   + VL  KYF N+S+LDA  R  SS  W   +WGL+LL
Subjt:  --------------RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL

Query:  KAGIRKNLGNGHSISLFLDPWLPRP
          G+RK +G+G S+  F DPW+PRP
Subjt:  KAGIRKNLGNGHSISLFLDPWLPRP

A0A803PWX1 Uncharacterized protein1.7e-6640.06Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNN-SLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK
        +NGE  G +TP RGLRQGDPLSP+LFLLC E  S L+    ++  L G+   R    +SHLFFADDS++FL A   E   FK +L  Y KASGQ VNF+K
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNN-SLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNK

Query:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRR----------------------------
        S + F R V    R++L++I+ + V  + G YLGLPS   R K + F+F+ + VW  L+GWKG FFS  G+                             
Subjt:  SSVLFSRNVAEETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRR----------------------------

Query:  ---------------RKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL
                        K+HW +W+ LCK KE  GL FRDL  FNQA++AKQ WR +  P+   S VL   Y+ N  V++A +   +SF W+  VWG +++
Subjt:  ---------------RKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELL

Query:  KAGIRKNLGNGHSISLFLDPWLPRPEGVHITHAEAIEDRKHL
        + G R  +GNG+S+ +  DPWLPRP    I     + D+ ++
Subjt:  KAGIRKNLGNGHSISLFLDPWLPRPEGVHITHAEAIEDRKHL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657505.8e-0829.46Show/hide
Query:  RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDA---ATRPSSSFFWKGFVWGL-ELLKAGIRKNLGN
        ++K H  +W K+C PK+  GL  R   + N+A+I+K  WR+L   +   + VL +KY +   + D+     + S S  W+    GL +++  G+    G+
Subjt:  RRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDA---ATRPSSSFFWKGFVWGL-ELLKAGIRKNLGN

Query:  GHSISLFLDPWL
        G  I  + D W+
Subjt:  GHSISLFLDPWL

P11369 LINE-1 retrotransposable element ORF2 protein3.5e-0526.83Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNKS
        +NGE    I    G RQG PLSPYLF +  E L+  +   +   + G+ I +   KIS L  ADD ++++            ++  + +  G  +N NKS
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNKS

Query:  -SVLFSRNVAEETRSYLSDILSMNVSTSLGSYLG--LPSVFNRGKTRDFKFLMDSVWALLQGWK
         + L+++N  ++    + +    ++ T+   YLG  L         ++FK L   +   L+ WK
Subjt:  -SVLFSRNVAEETRSYLSDILSMNVSTSLGSYLG--LPSVFNRGKTRDFKFLMDSVWALLQGWK

P92555 Uncharacterized mitochondrial protein AtMg012504.1e-1443.12Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDS----MIFLRAATWEFGAFKTILLDYEKASGQCV
        +NG   G +TPSRGLRQGDPLSPYLF+LCTE LS L  + +    L G+ ++   P+I+HL FADD+     I L A  W         L      G  V
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDS----MIFLRAATWEFGAFKTILLDYEKASGQCV

Query:  NFNKSSVLF
        N   S++ F
Subjt:  NFNKSSVLF

P93295 Uncharacterized mitochondrial protein AtMg003101.7e-2038.79Show/hide
Query:  FFSQGGRRRKMHWKRWEKLCKPKE-LSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRK
        ++S    +RK+ W  W+KLCK KE   GL FRDL  FNQA++AKQ++R+++ PH  +S +L  +YF +SS+++ +     S+ W+  + G ELL  G+ +
Subjt:  FFSQGGRRRKMHWKRWEKLCKPKE-LSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRK

Query:  NLGNGHSISLFLDPWL
         +G+G    ++LD W+
Subjt:  NLGNGHSISLFLDPWL

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.6e-0536.23Show/hide
Query:  KYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLFLDPWL----PRPEGVHITHAE
        +YF + S+LDA  R   S+ W   + G+ LLK G R  +G+G +I + LD  +    PRP     T+ E
Subjt:  KYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLFLDPWL----PRPEGVHITHAE

AT4G29090.1 Ribonuclease H-like superfamily protein2.4e-1738.1Show/hide
Query:  MHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLF
        MHWK W+ L   K   G+ F+D+ AFN A++ KQ WR+L+ P   ++ V   +YF  S  L+A      SF WK      E+L+ G R  +GNG  I ++
Subjt:  MHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLF

Query:  LDPWL
           WL
Subjt:  LDPWL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-2138.79Show/hide
Query:  FFSQGGRRRKMHWKRWEKLCKPKE-LSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRK
        ++S    +RK+ W  W+KLCK KE   GL FRDL  FNQA++AKQ++R+++ PH  +S +L  +YF +SS+++ +     S+ W+  + G ELL  G+ +
Subjt:  FFSQGGRRRKMHWKRWEKLCKPKE-LSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTISSVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRK

Query:  NLGNGHSISLFLDPWL
         +G+G    ++LD W+
Subjt:  NLGNGHSISLFLDPWL

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)2.9e-1543.12Show/hide
Query:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDS----MIFLRAATWEFGAFKTILLDYEKASGQCV
        +NG   G +TPSRGLRQGDPLSPYLF+LCTE LS L  + +    L G+ ++   P+I+HL FADD+     I L A  W         L      G  V
Subjt:  MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNS-LVGLSIARGCPKISHLFFADDS----MIFLRAATWEFGAFKTILLDYEKASGQCV

Query:  NFNKSSVLF
        N   S++ F
Subjt:  NFNKSSVLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGTGAATCCTTTGGATTCATTACACCATCCCGGGGTTTGAGACAAGGTGATCCTTTATCTCCCTATTTGTTTTTGCTATGTACGGAAGGTCTATCTGCTTTGCT
GGTAAAAGTCAGGAATAATTCCTTGGTTGGTCTGTCAATTGCTAGAGGATGCCCTAAAATTTCACATCTTTTCTTTGCGGATGATAGTATGATCTTTTTAAGGGCTGCAA
CCTGGGAATTTGGAGCTTTTAAGACCATCCTATTGGACTACGAGAAAGCATCTGGCCAGTGTGTTAATTTCAATAAATCGTCAGTGCTTTTTTCGAGAAATGTGGCTGAG
GAGACAAGATCATACTTGAGTGATATTCTCTCTATGAATGTGTCAACATCTCTGGGCTCATACCTAGGTTTACCTTCGGTTTTCAATCGGGGGAAAACTCGTGATTTCAA
ATTTCTTATGGATAGTGTTTGGGCTCTATTACAAGGATGGAAGGGTCAATTCTTCTCTCAAGGGGGAAGGAGGCGTAAAATGCACTGGAAACGATGGGAGAAGCTATGTA
AACCAAAGGAGTTGAGTGGTTTAAATTTTAGAGATCTTGTTGCTTTTAACCAGGCCATGATTGCTAAACAAGCTTGGAGAGTGTTAAATAATCCCCATTTAACAATATCC
AGTGTGTTATGGGAAAAGTATTTTCTGAATTCTTCTGTCCTTGATGCGGCTACCCGTCCATCCTCGTCTTTCTTCTGGAAAGGCTTTGTGTGGGGTCTGGAACTCCTGAA
GGCTGGAATAAGGAAAAATCTGGGTAATGGCCATTCTATTTCTTTGTTTCTGGATCCATGGCTCCCTAGGCCTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAG
ATCGAAAGCACTTAAGACATTCAATTTTACTCCTAAAGCATGCATGTTCTAGAAAAGACAGAATAGAGAGTTTAGAAAACACCAACCTTTGTAGCTCACTTATGTTGAAC
TCCTTGTGGTGTTTGCCTCTCCTATGCTCCTCGGACAACCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGGTGAATCCTTTGGATTCATTACACCATCCCGGGGTTTGAGACAAGGTGATCCTTTATCTCCCTATTTGTTTTTGCTATGTACGGAAGGTCTATCTGCTTTGCT
GGTAAAAGTCAGGAATAATTCCTTGGTTGGTCTGTCAATTGCTAGAGGATGCCCTAAAATTTCACATCTTTTCTTTGCGGATGATAGTATGATCTTTTTAAGGGCTGCAA
CCTGGGAATTTGGAGCTTTTAAGACCATCCTATTGGACTACGAGAAAGCATCTGGCCAGTGTGTTAATTTCAATAAATCGTCAGTGCTTTTTTCGAGAAATGTGGCTGAG
GAGACAAGATCATACTTGAGTGATATTCTCTCTATGAATGTGTCAACATCTCTGGGCTCATACCTAGGTTTACCTTCGGTTTTCAATCGGGGGAAAACTCGTGATTTCAA
ATTTCTTATGGATAGTGTTTGGGCTCTATTACAAGGATGGAAGGGTCAATTCTTCTCTCAAGGGGGAAGGAGGCGTAAAATGCACTGGAAACGATGGGAGAAGCTATGTA
AACCAAAGGAGTTGAGTGGTTTAAATTTTAGAGATCTTGTTGCTTTTAACCAGGCCATGATTGCTAAACAAGCTTGGAGAGTGTTAAATAATCCCCATTTAACAATATCC
AGTGTGTTATGGGAAAAGTATTTTCTGAATTCTTCTGTCCTTGATGCGGCTACCCGTCCATCCTCGTCTTTCTTCTGGAAAGGCTTTGTGTGGGGTCTGGAACTCCTGAA
GGCTGGAATAAGGAAAAATCTGGGTAATGGCCATTCTATTTCTTTGTTTCTGGATCCATGGCTCCCTAGGCCTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAG
ATCGAAAGCACTTAAGACATTCAATTTTACTCCTAAAGCATGCATGTTCTAGAAAAGACAGAATAGAGAGTTTAGAAAACACCAACCTTTGTAGCTCACTTATGTTGAAC
TCCTTGTGGTGTTTGCCTCTCCTATGCTCCTCGGACAACCTCTAG
Protein sequenceShow/hide protein sequence
MNGESFGFITPSRGLRQGDPLSPYLFLLCTEGLSALLVKVRNNSLVGLSIARGCPKISHLFFADDSMIFLRAATWEFGAFKTILLDYEKASGQCVNFNKSSVLFSRNVAE
ETRSYLSDILSMNVSTSLGSYLGLPSVFNRGKTRDFKFLMDSVWALLQGWKGQFFSQGGRRRKMHWKRWEKLCKPKELSGLNFRDLVAFNQAMIAKQAWRVLNNPHLTIS
SVLWEKYFLNSSVLDAATRPSSSFFWKGFVWGLELLKAGIRKNLGNGHSISLFLDPWLPRPEGVHITHAEAIEDRKHLRHSILLLKHACSRKDRIESLENTNLCSSLMLN
SLWCLPLLCSSDNL