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Lag0018321 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018321
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr5:22935965..22938682
RNA-Seq ExpressionLag0018321
SyntenyLag0018321
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033260.1 gag/pol protein [Cucumis melo var. makuwa]6.5e-0758.18Show/hide
Query:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
        IG LVK+ LL+ELED SL PY SCL+G MT   FTGK  +++  LKL+H D CG+
Subjt:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
KAA0034961.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-0762.96Show/hide
Query:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCG
        IG LVK+ LLS+LED+SL P  SCL+GNMT   FTGK L+++  L+LVHLD CG
Subjt:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCG
KAA0042102.1 gag/pol protein [Cucumis melo var. makuwa]8.5e-0757.14Show/hide
Query:  MIGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
        +IG LVKS LLS+LED+SL P  SCL+G MT   FTGK L+++  L+L+H D CG+
Subjt:  MIGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
KAA0050552.1 gag/pol protein [Cucumis melo var. makuwa]8.5e-0758.18Show/hide
Query:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
        IG LVKS LLS+LED+SL P  SCL+G MT  +FTGK L+++  L+LVH + CG+
Subjt:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
TYK19615.1 gag/pol protein [Cucumis melo var. makuwa]6.5e-0758.18Show/hide
Query:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
        IG LVK+ LL+ELED SL PY SCL+G MT   FTGK  +++  LKL+H D CG+
Subjt:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
TrEMBL top hitse value%identityAlignment
A0A5A7SQR1 Gag/pol protein3.2e-0758.18Show/hide
Query:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
        IG LVK+ LL+ELED SL PY SCL+G MT   FTGK  +++  LKL+H D CG+
Subjt:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
A0A5A7TF90 Gag/pol protein4.1e-0757.14Show/hide
Query:  MIGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
        +IG LVKS LLS+LED+SL P  SCL+G MT   FTGK L+++  L+L+H D CG+
Subjt:  MIGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
A0A5D3D5J6 Gag/pol protein4.1e-0758.18Show/hide
Query:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
        IG LVKS LLS+LED+SL P  SCL+G MT  +FTGK L+++  L+LVH + CG+
Subjt:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
A0A5D3D7T6 Gag/pol protein3.2e-0758.18Show/hide
Query:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
        IG LVK+ LL+ELED SL PY SCL+G MT   FTGK  +++  LKL+H D CG+
Subjt:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGT
A0A5D3DCL7 Gag/pol protein6.4e-0862.96Show/hide
Query:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCG
        IG LVK+ LLS+LED+SL P  SCL+GNMT   FTGK L+++  L+LVHLD CG
Subjt:  IGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGGAACTTGGTCAAGAGTGTACTTCTAAGCGAGTTAGAAGACGACTCTCTACTACCTTATAGCTCATGCCTTAAGGGCAATATGACTAATACGTTTTTTACTGG
AAAAGAGCTAAAGAGCCAAAGAGTCCTTAAGCTTGTACATTTGGATCCTTGCGGAACATCCACAAGAGTTGTTGATGAGGCTGGTTGTTCATCAAGAGTTGTTGATGTTG
GGGGGGGATTCAGATTCGGAGATTCAAATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCA
AGATTCAGAATTCAACCAACTCAAGACTCAGAAGTAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATC
ATCCAAGAAGATCAACAAGCCAACAGGCCGAGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCCAAGAGATCATTAAGCCAGCAGGCCGATCATCCAAGAAGA
TCAACAAGCCAACAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCAACAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAACGGGCCG
ATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAATAAGCCAGCAAGTCGATCCAAGAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCATC
AAGCCAACAGACCGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAATAGGTCGATCATCCAAGGAGATCAACAAGCTAACAAGCCGA
TCCAAAAGATCAACAAGCCAACAGGCCGATCATCCAGAATATCATCAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGGTCATCAA
GCCAACAGGCCGATCATCCAAGAAGACCAACAAGCCAACAGGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAGCCAACAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGGAACTTGGTCAAGAGTGTACTTCTAAGCGAGTTAGAAGACGACTCTCTACTACCTTATAGCTCATGCCTTAAGGGCAATATGACTAATACGTTTTTTACTGG
AAAAGAGCTAAAGAGCCAAAGAGTCCTTAAGCTTGTACATTTGGATCCTTGCGGAACATCCACAAGAGTTGTTGATGAGGCTGGTTGTTCATCAAGAGTTGTTGATGTTG
GGGGGGGATTCAGATTCGGAGATTCAAATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCA
AGATTCAGAATTCAACCAACTCAAGACTCAGAAGTAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATC
ATCCAAGAAGATCAACAAGCCAACAGGCCGAGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCCAAGAGATCATTAAGCCAGCAGGCCGATCATCCAAGAAGA
TCAACAAGCCAACAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCAACAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAACGGGCCG
ATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAAATCAATAAGCCAGCAAGTCGATCCAAGAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCATC
AAGCCAACAGACCGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAATAGGTCGATCATCCAAGGAGATCAACAAGCTAACAAGCCGA
TCCAAAAGATCAACAAGCCAACAGGCCGATCATCCAGAATATCATCAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGGTCATCAA
GCCAACAGGCCGATCATCCAAGAAGACCAACAAGCCAACAGGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAGCCAACAAGCTGA
Protein sequenceShow/hide protein sequence
MIGNLVKSVLLSELEDDSLLPYSSCLKGNMTNTFFTGKELKSQRVLKLVHLDPCGTSTRVVDEAGCSSRVVDVGGGFRFGDSNQRTQSPENSARVQSHQKSESLENSEDP
RFRIQPTQDSEVDRSSKKINKPTGRSSKKINKPTGRSSKKINKPTGRDHPRRSTSHNRPIQEIIKPAGRSSKKINKPTGRSSKRINKLTSRSNRSTSQSTDQEDQQVNGP
IIQEDQQANKPIQQINKPASRSKRSTSQQADHPRRSSSQQTDHPRRSTSQQADPRDHQANRSIIQGDQQANKPIQKINKPTGRSSRISSSQQVDHPRRSTSQQADPRGHQ
ANRPIIQEDQQANRPIQEIIKPTGRSSKKINKPTS