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Lag0018332 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018332
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:23564719..23565956
RNA-Seq ExpressionLag0018332
SyntenyLag0018332
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.0e-1850Show/hide
Query:  MAERIGNAVGVFEDVD-NQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGD
        MA R+GNA+G+FEDV+ N N F + G+ LR+RV+ D+ +PL  GI++  DGP+ G WIP +YERLPD     G + H  +DC     VD   S  LQYG 
Subjt:  MAERIGNAVGVFEDVD-NQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGD

Query:  WLRFSG
        WLRF G
Subjt:  WLRFSG

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]5.2e-1442.72Show/hide
Query:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRI-YPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGD
        MA  +G  +G  E+++      ++G  +R+RV+ID+++PLR GI++   DG    +W P RYE+LPD C   G IGH  R+C     V   NSP  QYGD
Subjt:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRI-YPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGD

Query:  WLR
        WLR
Subjt:  WLR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]8.5e-2557.01Show/hide
Query:  MAERIGNAVGVFEDVD-NQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNS-PVLQYG
        MA R+GNA+G F DVD N+ GF + GASLRIRV ID+T+PLR GI+I  DGP+ G WIP +YERLPD C F G+IGH S DC   +   + +S    +YG
Subjt:  MAERIGNAVGVFEDVD-NQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNS-PVLQYG

Query:  DWLRFSG
         WLRF G
Subjt:  DWLRFSG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.0e-1440.95Show/hide
Query:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGDW
        MA R+GNA+G FE+ D  +     G++LR+RV +D+++PLR GI++  DGP+ G WIP +YERLPD C   G+     +                QYG W
Subjt:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGDW

Query:  LRFSG
        LR+ G
Subjt:  LRFSG

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.0e-1441.75Show/hide
Query:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPF-SVDRGNSPVLQYGD
        + E +GNAVG F D+D ++G +  G ++RIRV +D+ +PLR G+++        +W+ F+YERLP  C F G +GH  R+C     S D      LQYG 
Subjt:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPF-SVDRGNSPVLQYGD

Query:  WLR
        WLR
Subjt:  WLR

TrEMBL top hitse value%identityAlignment
A0A2P5C5M3 Zinc knuckle CX2CX4HX4C2.1e-1337.5Show/hide
Query:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGDW
        + E IG+ +GV ++V+        G  +RIRVQ+D++ PLR G R+        + +  RYERL + C  YG +GH  ++C   F VD  +   L YG W
Subjt:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGDW

Query:  LRFS
        LR S
Subjt:  LRFS

A0A6J1BSZ1 uncharacterized protein LOC1110054819.8e-1950Show/hide
Query:  MAERIGNAVGVFEDVD-NQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGD
        MA R+GNA+G+FEDV+ N N F + G+ LR+RV+ D+ +PL  GI++  DGP+ G WIP +YERLPD     G + H  +DC     VD   S  LQYG 
Subjt:  MAERIGNAVGVFEDVD-NQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGD

Query:  WLRFSG
        WLRF G
Subjt:  WLRFSG

A0A6J1D765 uncharacterized protein LOC1110179022.5e-1442.72Show/hide
Query:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRI-YPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGD
        MA  +G  +G  E+++      ++G  +R+RV+ID+++PLR GI++   DG    +W P RYE+LPD C   G IGH  R+C     V   NSP  QYGD
Subjt:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRI-YPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGD

Query:  WLR
        WLR
Subjt:  WLR

A0A6J1DU55 uncharacterized protein LOC1110231354.1e-2557.01Show/hide
Query:  MAERIGNAVGVFEDVD-NQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNS-PVLQYG
        MA R+GNA+G F DVD N+ GF + GASLRIRV ID+T+PLR GI+I  DGP+ G WIP +YERLPD C F G+IGH S DC   +   + +S    +YG
Subjt:  MAERIGNAVGVFEDVD-NQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNS-PVLQYG

Query:  DWLRFSG
         WLRF G
Subjt:  DWLRFSG

A0A6J1DX30 uncharacterized protein LOC1110248745.0e-1540.95Show/hide
Query:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGDW
        MA R+GNA+G FE+ D  +     G++LR+RV +D+++PLR GI++  DGP+ G WIP +YERLPD C   G+     +                QYG W
Subjt:  MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGDW

Query:  LRFSG
        LR+ G
Subjt:  LRFSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCGAATCGGGAACGCTGTTGGTGTATTTGAAGATGTGGATAATCAAAATGGTTTTCTCTTTTCGGGGGCAAGCTTGAGGATTCGGGTCCAAATTGATTTAAC
TCGACCTCTTCGACATGGAATCCGTATTTATCCAGATGGTCCTTTAAGCGGCTTGTGGATTCCGTTCAGGTATGAACGCTTGCCAGATTTATGCTCTTTCTATGGAATTA
TTGGACATGGATCTCGTGATTGTGTTCATCCTTTTAGTGTTGATCGCGGTAATAGTCCAGTCCTGCAATATGGGGATTGGTTAAGATTCTCAGGGAAAGGGATGATTCAA
GAGAGGGATGAGGTTCCTAGACAAAGACAAAGAGGGATCAAAATTGAGGAATCGACTGAAGAGCAGCAACGCTTGAAACAAGCTGAACCGCCAGTGCTTTACTCTCTCAC
TGGCGACATGAATGAATCGAAGAAAGGGAAGGAGAAGGTCGTTGATGTTGCAAGCAAGTACAGGGGAGGTTTCTCAACTTTCTCGCATCTGTGGTGGCCGGAAAGCTCTC
GCCTTAATGGTTGTTCGAGCTCTGCCAAGGAGGAGCAACAGAGTGCAGATCCGGTGACCGTTACGGAGGAAGAGAAAGAAAATTTAAAGCAGTCGTTTCGATTTAATATT
GGTGATGGTCTGCATGATTATGAGGGTGTATTGAAGGACTGCAATACCCGGTTCTCTGAGAATTTAATGGCCATTTTCAAAACATCTTCGACTGAATTTATGGGCCAAGA
TTCTGGAATTAATAAGGTATGTGATGATGATGGGCTGATTGAGAGTGATCCAGAGATGGATGTGGAGTTCGGGCCTTTGGACTCAAATGGGGTGGCGTGGACTGATGAAA
AGATAGATGATGGTCTGGATGAGGGGCGTGGTTTCACTTGGAAGAAGAGGGCTCGTGCTGGTTTAGTGCCTGTGGGTATGAATGTTGAAGCAATGGAGGAGTTTCAGAAG
CGCAAGGATGGACCAATTTTGTTCTCCCCAGAGAATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGCGAATCGGGAACGCTGTTGGTGTATTTGAAGATGTGGATAATCAAAATGGTTTTCTCTTTTCGGGGGCAAGCTTGAGGATTCGGGTCCAAATTGATTTAAC
TCGACCTCTTCGACATGGAATCCGTATTTATCCAGATGGTCCTTTAAGCGGCTTGTGGATTCCGTTCAGGTATGAACGCTTGCCAGATTTATGCTCTTTCTATGGAATTA
TTGGACATGGATCTCGTGATTGTGTTCATCCTTTTAGTGTTGATCGCGGTAATAGTCCAGTCCTGCAATATGGGGATTGGTTAAGATTCTCAGGGAAAGGGATGATTCAA
GAGAGGGATGAGGTTCCTAGACAAAGACAAAGAGGGATCAAAATTGAGGAATCGACTGAAGAGCAGCAACGCTTGAAACAAGCTGAACCGCCAGTGCTTTACTCTCTCAC
TGGCGACATGAATGAATCGAAGAAAGGGAAGGAGAAGGTCGTTGATGTTGCAAGCAAGTACAGGGGAGGTTTCTCAACTTTCTCGCATCTGTGGTGGCCGGAAAGCTCTC
GCCTTAATGGTTGTTCGAGCTCTGCCAAGGAGGAGCAACAGAGTGCAGATCCGGTGACCGTTACGGAGGAAGAGAAAGAAAATTTAAAGCAGTCGTTTCGATTTAATATT
GGTGATGGTCTGCATGATTATGAGGGTGTATTGAAGGACTGCAATACCCGGTTCTCTGAGAATTTAATGGCCATTTTCAAAACATCTTCGACTGAATTTATGGGCCAAGA
TTCTGGAATTAATAAGGTATGTGATGATGATGGGCTGATTGAGAGTGATCCAGAGATGGATGTGGAGTTCGGGCCTTTGGACTCAAATGGGGTGGCGTGGACTGATGAAA
AGATAGATGATGGTCTGGATGAGGGGCGTGGTTTCACTTGGAAGAAGAGGGCTCGTGCTGGTTTAGTGCCTGTGGGTATGAATGTTGAAGCAATGGAGGAGTTTCAGAAG
CGCAAGGATGGACCAATTTTGTTCTCCCCAGAGAATATTTAA
Protein sequenceShow/hide protein sequence
MAERIGNAVGVFEDVDNQNGFLFSGASLRIRVQIDLTRPLRHGIRIYPDGPLSGLWIPFRYERLPDLCSFYGIIGHGSRDCVHPFSVDRGNSPVLQYGDWLRFSGKGMIQ
ERDEVPRQRQRGIKIEESTEEQQRLKQAEPPVLYSLTGDMNESKKGKEKVVDVASKYRGGFSTFSHLWWPESSRLNGCSSSAKEEQQSADPVTVTEEEKENLKQSFRFNI
GDGLHDYEGVLKDCNTRFSENLMAIFKTSSTEFMGQDSGINKVCDDDGLIESDPEMDVEFGPLDSNGVAWTDEKIDDGLDEGRGFTWKKRARAGLVPVGMNVEAMEEFQK
RKDGPILFSPENI