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Lag0018338 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018338
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr5:23620660..23621692
RNA-Seq ExpressionLag0018338
SyntenyLag0018338
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.1e-1953.85Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGK
        +Y  Y+A     +EF + E T +  PHNDA V+TL + N K+HRIL+DGGS  D+ SL A++AM LG E+LK SLTPL+GFGGER+ P+G+
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGK
XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]2.6e-1854.44Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
        +Y  Y+A     +EF K   T +  PHNDA ++TL + N K+HRIL+DGGS  D +SL A++AM LG+E LK SLTPL+GFGGERV P G
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.2e-1751.65Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGK
        +Y  Y+      +EF + E T +  PHNDA V+TL + NVK+HRIL+DGGS  D++S  A++AM LG ++LK S  PLVGFGGERV  EG+
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGK
XP_022158827.1 uncharacterized protein LOC111025291 [Momordica charantia]1.0e-1752.22Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
        +Y  Y+      +EF + E T +  PHNDA V+TL + N K+HRIL+DGGS  D++S  A++AM LG ++LK SL PLVGFGGERV P+G
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
XP_022158828.1 uncharacterized protein LOC111025292 [Momordica charantia]1.0e-1752.22Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
        +Y  Y+      +EF + E T +  PHNDA V+TL + N K+HRIL+DGGS  D++S  A++AM LG ++LK SL PLVGFGGERV P+G
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159015.2e-2053.85Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGK
        +Y  Y+A     +EF + E T +  PHNDA V+TL + N K+HRIL+DGGS  D+ SL A++AM LG E+LK SLTPL+GFGGER+ P+G+
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGK
A0A6J1DKR9 uncharacterized protein LOC1110214381.3e-1854.44Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
        +Y  Y+A     +EF K   T +  PHNDA ++TL + N K+HRIL+DGGS  D +SL A++AM LG+E LK SLTPL+GFGGERV P G
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
A0A6J1DQY2 uncharacterized protein LOC1110223211.1e-1751.65Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGK
        +Y  Y+      +EF + E T +  PHNDA V+TL + NVK+HRIL+DGGS  D++S  A++AM LG ++LK S  PLVGFGGERV  EG+
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGK
A0A6J1DX67 uncharacterized protein LOC1110252924.8e-1852.22Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
        +Y  Y+      +EF + E T +  PHNDA V+TL + N K+HRIL+DGGS  D++S  A++AM LG ++LK SL PLVGFGGERV P+G
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
A0A6J1DY78 uncharacterized protein LOC1110252914.8e-1852.22Show/hide
Query:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
        +Y  Y+      +EF + E T +  PHNDA V+TL + N K+HRIL+DGGS  D++S  A++AM LG ++LK SL PLVGFGGERV P+G
Subjt:  MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCTGTCTACCTAGCAAAGGCACACCCCCCTTTGGAGTTCCCTAAGGTTGAGCCAACAAGCATCCATCGACCACATAATGATGCTCAGGTGGTCACTTTGATGGT
ACCCAATGTGAAAATCCATCGGATTCTGATCGATGGAGGAAGTTTTGTTGATGTTCTTTCTCTAATAGCATTTGAGGCAATGAAGTTAGGGAGAGAACTCTTAAAACCAA
GCCTTACCCCACTTGTAGGGTTTGGGGGAGAAAGGGTGACACCAGAGGGGAAACAGAAGGCATCGAATGAATGTTACTGGATAACATTGAGAGAAGTTAAGCCATTGAGG
GTCGAGGCCAACCAGAGGATGAGCCAAAGCCGAGCAAGCATCACCTTCAAGCCAGAACTAGTTAAAGTTAAGCGAACCTGGGCCCTCGGGTCTACCACATCTCATCCAGA
TTTCAATACATGCGAGCCTAAGCTCTCGAGCTTAGAGCCCACGCCTATATGCGATCCTAGGCCACCGTGTCTACCTTGCCTCATCCAGCTTAAGCCCATCATCCTGTACG
AGTCAAACCCTCGGGTCTACCTCGTCCCATCTAGATATGAGATTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCTGTCTACCTAGCAAAGGCACACCCCCCTTTGGAGTTCCCTAAGGTTGAGCCAACAAGCATCCATCGACCACATAATGATGCTCAGGTGGTCACTTTGATGGT
ACCCAATGTGAAAATCCATCGGATTCTGATCGATGGAGGAAGTTTTGTTGATGTTCTTTCTCTAATAGCATTTGAGGCAATGAAGTTAGGGAGAGAACTCTTAAAACCAA
GCCTTACCCCACTTGTAGGGTTTGGGGGAGAAAGGGTGACACCAGAGGGGAAACAGAAGGCATCGAATGAATGTTACTGGATAACATTGAGAGAAGTTAAGCCATTGAGG
GTCGAGGCCAACCAGAGGATGAGCCAAAGCCGAGCAAGCATCACCTTCAAGCCAGAACTAGTTAAAGTTAAGCGAACCTGGGCCCTCGGGTCTACCACATCTCATCCAGA
TTTCAATACATGCGAGCCTAAGCTCTCGAGCTTAGAGCCCACGCCTATATGCGATCCTAGGCCACCGTGTCTACCTTGCCTCATCCAGCTTAAGCCCATCATCCTGTACG
AGTCAAACCCTCGGGTCTACCTCGTCCCATCTAGATATGAGATTATGTGA
Protein sequenceShow/hide protein sequence
MYSVYLAKAHPPLEFPKVEPTSIHRPHNDAQVVTLMVPNVKIHRILIDGGSFVDVLSLIAFEAMKLGRELLKPSLTPLVGFGGERVTPEGKQKASNECYWITLREVKPLR
VEANQRMSQSRASITFKPELVKVKRTWALGSTTSHPDFNTCEPKLSSLEPTPICDPRPPCLPCLIQLKPIILYESNPRVYLVPSRYEIM