CuGenDBv2

Gene ID	Lag0018345
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Photosystem I iron-sulfur center
Genome location	chr5:23799778..23803432
RNA-Seq Expression	Lag0018345
Synteny	Lag0018345
Gene Ontology terms	GO:0009733 - response to auxin (biological process) GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009507 - chloroplast (cellular component) GO:0009522 - photosystem I (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0042651 - thylakoid membrane (cellular component) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like IPR017491 - Photosystem I protein PsaC IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR036001 - Photosystem antenna protein-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ALI90448.1 PsaC, partial [Nama carnosa]

1.1e-27

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

YP_001122848.1 photosystem I subunit VII [Phaseolus vulgaris]

1.1e-27

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

YP_009138437.1 photosystem I subunit VII [Lathyrus davidii]

1.1e-27

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

YP_009334710.1 photosystem I subunit VII [Camassia scilloides]

1.1e-27

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

YP_009918876.1 photosystem I subunit VII [Metagentiana rhodantha]

1.1e-27

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

TrEMBL top hits

e value

%identity

Alignment

A0A218KGA0 Photosystem I iron-sulfur center

5.1e-28

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

A0A410HFC6 Photosystem I iron-sulfur center

5.1e-28

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

A0A6M8P9Q0 Photosystem I iron-sulfur center

5.1e-28

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

D5MAH2 Photosystem I iron-sulfur center

5.1e-28

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

G3ETV0 Photosystem I iron-sulfur center

5.1e-28

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

SwissProt top hits

e value

%identity

Alignment

A4GGE7 Photosystem I iron-sulfur center

1.4e-30

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

A4QJG7 Photosystem I iron-sulfur center

9.0e-30

95.16

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

A4QJQ1 Photosystem I iron-sulfur center

9.0e-30

95.16

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

P10793 Photosystem I iron-sulfur center

1.4e-30

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

P42046 Photosystem I iron-sulfur center

1.4e-30

96.77

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

Arabidopsis top hits

e value

%identity

Alignment

ATCG00280.1 photosystem II reaction center protein C

8.3e-23

81.97

Show/hide

Query:  RFYPVETLFNGTLALAGRDQETTGFAWWVGNARQLNLSGKLLGAHVAHAGLIIASFGAFDI
        RFY VETLFNGTLALAGRDQETTGFAWW GNAR +NLSGKLLGAHVAHAGLI+   GA ++
Subjt:  RFYPVETLFNGTLALAGRDQETTGFAWWVGNARQLNLSGKLLGAHVAHAGLIIASFGAFDI

ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding

6.4e-31

95.16

Show/hide

Query:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA
        TQCVRACPT VLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTR+
Subjt:  TQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCAATGTGTGGCAAAGGGAAATCATCCTTGGGACCGGCTTTGTTGAGGTCACGAAAGTCAACGCACATGCGGACTCTGCCGTCCTTTTTCGGGACAGGAACTATGTT
GGCTTTTTTTTTTCTGCAACTCAATCAAAATCAAAGCAAACTTATTGCAACTACATCAACAACCGGGGGGAAATTCATCGCGACCGGCTCCGCAAGAAAAGAAGGTTTCG
GAACATGTACTGAGAGGCTCCTTGTGCAATCCCCATTTATCCACTTTGTTGACTCAACAAAAGAATCGACTTTGTTTGTTTGCTTTGGTGCTATCGAGTATGCCGGGACC
AAGTCCAGGGCCCGTCCATTGCTGACGAAAGCCTATTCCTCCTCAAAAGAAGATAGGGCTACCCTCCTTCAGAGATTGCTTGCGGTCAAACCATTTCTTCCATTGCTAGG
CGGGTTTCGCCAAAGCCTTTACCACTCCAAGACTGATGTTTTCGCCGTATGGAGTATAGCCGAGTGGAGGTTCTACCCCGTGGAAACGCTCTTTAATGGAACTTTAGCTT
TAGCTGGTCGTGACCAAGAAACCACCGGTTTCGCTTGGTGGGTCGGGAATGCCCGACAACTCAATTTATCCGGTAAACTACTAGGGGCTCATGTAGCCCATGCCGGATTA
ATCATAGCTAGTTTTGGGGCTTTCGACATAAAAAAGACGATCCGGCTTGCCATAGCATCGTCCTTTGTAACGATCAAGACTGGGATCCTTCGGTTTGATTCTCCTGTTTC
GGATGCCTCTGGCTGGGAAGAAGCCCTAATCTTCGAGTCAGGAGATACCTTGAAAACAGTGAAAGCTGAATCCTATTTCATTTCGTTTAGAAGAAGGCTTTGTCTCATCC
CTTCCCACCTATCTAACCATCGAGATATGGGTATAGCACAGGCTGCTATGAGAGGAAATTCAGGCTCACCATCTGTCTGCATAGCGCCGACCCCAACCTGGGAGACGATT
CAATCAAAGGTCGAATTCACCTCCGAACGTCTTTCGTACCAACCAGAGGGCGTGACTTACAGAACGGTCTCGAGAGGACTTCTTCGCATCGGTACTCAATGTGTCCGAGC
TTGCCCCACATATGTATTAGAAATGATACCTTGGGGCGGATGTAAAGCTAAGCAAATAGCTTCGGCTCCAAGAACAGAAGACTGTGTTGGTTGTAAGAGATGTGAATCTG
CTTGTCCGACGGATTTCTTGAGTGTTCGCGTTTATTTATGGCATGAAACAACTCGGGCGGAGCTTGAGGCTTCTCAGCCGCAAGAACAGGGAACAAATCCTCCAAAAATG
GAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSMCGKGKSSLGPALLRSRKSTHMRTLPSFFGTGTMLAFFFLQLNQNQSKLIATTSTTGGKFIATGSARKEGFGTCTERLLVQSPFIHFVDSTKESTLFVCFGAIEYAGT
KSRARPLLTKAYSSSKEDRATLLQRLLAVKPFLPLLGGFRQSLYHSKTDVFAVWSIAEWRFYPVETLFNGTLALAGRDQETTGFAWWVGNARQLNLSGKLLGAHVAHAGL
IIASFGAFDIKKTIRLAIASSFVTIKTGILRFDSPVSDASGWEEALIFESGDTLKTVKAESYFISFRRRLCLIPSHLSNHRDMGIAQAAMRGNSGSPSVCIAPTPTWETI
QSKVEFTSERLSYQPEGVTYRTVSRGLLRIGTQCVRACPTYVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRAELEASQPQEQGTNPPKM
E

Lag0018345 (gene) of Sponge gourd (AG-4) v1 genome