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Lag0018346 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018346
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:23804402..23805469
RNA-Seq ExpressionLag0018346
SyntenyLag0018346
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU51648.1 hypothetical protein [Tanacetum cinerariifolium]1.5e-0671.74Show/hide
Query:  VDLSRTITAGVGLGLRTVCETSFCLIQLGPKTGGSLGEMGKPSSCR
        V+LSRT+T GVGLGL+ V  TSFCLIQLGPK  GSLGEM + SS R
Subjt:  VDLSRTITAGVGLGLRTVCETSFCLIQLGPKTGGSLGEMGKPSSCR
GEV19508.1 hypothetical protein [Tanacetum cinerariifolium]1.4e-0459.62Show/hide
Query:  SSVDLSRTITAGVGLGLRTVCETSFCLIQLGPKTGGSLGEMGKPSSCRSGRG
        ++V+LSRT+TAGVGLGLRTV  TSFCLIQLGPK  G + E  +  +  S  G
Subjt:  SSVDLSRTITAGVGLGLRTVCETSFCLIQLGPKTGGSLGEMGKPSSCRSGRG
KAF7117295.1 hypothetical protein RHSIM_RhsimMtG0004300 [Rhododendron simsii]3.1e-1282Show/hide
Query:  SSVDLSRTITAGVGLGLRTVCETSFCLIQLGPKTGGSLGEMGKPSSCRSG
        + +DLSRT+TAGVGLGLRTV ETSFCLIQL PKTGGSLGEMG+PSS R G
Subjt:  SSVDLSRTITAGVGLGLRTVCETSFCLIQLGPKTGGSLGEMGKPSSCRSG
TrEMBL top hitse value%identityAlignment
A0A6L2KQD0 CCHC-type domain-containing protein7.3e-0771.74Show/hide
Query:  VDLSRTITAGVGLGLRTVCETSFCLIQLGPKTGGSLGEMGKPSSCR
        V+LSRT+T GVGLGL+ V  TSFCLIQLGPK  GSLGEM + SS R
Subjt:  VDLSRTITAGVGLGLRTVCETSFCLIQLGPKTGGSLGEMGKPSSCR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAGCTTGAGAAGCTTCTGGTCAAGTGGGCCCGAACAAGATCGAAAGCACGACTTCTCATTCGAAGCATGAAAGTGGTCAGGTCACAACAAGCCGGAAGAGAGAG
GAGTGGCCTTCTCGAAGAAAATCATGATCCCATCTCGATCAATTTCGCATTGATCGGGGCGGGCGTTCGAATCTCCAGACGACTTTCTTCAACCGCCCCTGTTCCAACAG
CTAGAGATAATCAAAGTTCAGTTGACCTAAGCCGCACCATTACTGCTGGGGTGGGGCTCGGCCTCCGAACCGTATGTGAGACGAGTTTCTGCCTCATACAGCTCGGGCCG
AAGACCGGGGGAAGTTTAGGAGAGATGGGGAAACCCAGCAGCTGCCGGTCGGGGCGGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGAGCTTGAGAAGCTTCTGGTCAAGTGGGCCCGAACAAGATCGAAAGCACGACTTCTCATTCGAAGCATGAAAGTGGTCAGGTCACAACAAGCCGGAAGAGAGAG
GAGTGGCCTTCTCGAAGAAAATCATGATCCCATCTCGATCAATTTCGCATTGATCGGGGCGGGCGTTCGAATCTCCAGACGACTTTCTTCAACCGCCCCTGTTCCAACAG
CTAGAGATAATCAAAGTTCAGTTGACCTAAGCCGCACCATTACTGCTGGGGTGGGGCTCGGCCTCCGAACCGTATGTGAGACGAGTTTCTGCCTCATACAGCTCGGGCCG
AAGACCGGGGGAAGTTTAGGAGAGATGGGGAAACCCAGCAGCTGCCGGTCGGGGCGGGGATAA
Protein sequenceShow/hide protein sequence
MLELEKLLVKWARTRSKARLLIRSMKVVRSQQAGRERSGLLEENHDPISINFALIGAGVRISRRLSSTAPVPTARDNQSSVDLSRTITAGVGLGLRTVCETSFCLIQLGP
KTGGSLGEMGKPSSCRSGRG