; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018353 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018353
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPhotosystem II CP47 reaction center protein-like
Genome locationchr5:23925388..23929002
RNA-Seq ExpressionLag0018353
SyntenyLag0018353
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFA10144.1 hypothetical protein [Tanacetum cinerariifolium]4.3e-0544.44Show/hide
Query:  SAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMIASSKNPA
        SAGK N  T T  SS  PIG   D SA+ +V  VG +S   +   T+ G+K MLAP+S KA  +S+P   HGM   S +P+
Subjt:  SAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMIASSKNPA

GFC94328.1 hypothetical protein [Tanacetum cinerariifolium]3.3e-0544.59Show/hide
Query:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGM
        KS GK N  TLTN SS+ P+G   DLS++ +V  VG +S   +  + + G++LMLAPKS +A  TS+P    G+
Subjt:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGM

KAA0056500.1 photosystem II CP47 reaction center protein-like [Cucumis melo var. makuwa]3.5e-1561.84Show/hide
Query:  IKSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMI
        +KSA   NLSTLTN SSIFP GCV DLSANC  TVVG A PIP+ LK +  IKL+LAP+ H A P S+P +EH ++
Subjt:  IKSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMI

XP_015960408.1 uncharacterized protein LOC107484311 [Arachis duranensis]7.9e-0751.43Show/hide
Query:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPM
        KSAG  N STLT   S  P+G   DLSA+CKV ++G  S I N L  + GI+L+L PKSH AL     PM
Subjt:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPM

XP_035845326.1 protein FAR1-RELATED SEQUENCE 2-like [Helianthus annuus]5.1e-0657.14Show/hide
Query:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKAL
        KS GKTNLSTLT   SI P G ++DLSA  K   VG  SP PN    EYGIK +LAP+  +AL
Subjt:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKAL

TrEMBL top hitse value%identityAlignment
A0A392PAT4 Uncharacterized protein (Fragment)1.8e-0444Show/hide
Query:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMI
        KSAGK+ LST+T+ SS  P G     S    V +V   SP  +  + E GIKL LAP+S   LP   PP+ HG++
Subjt:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMI

A0A5D3DZH8 Photosystem II CP47 reaction center protein-like1.7e-1561.84Show/hide
Query:  IKSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMI
        +KSA   NLSTLTN SSIFP GCV DLSANC  TVVG A PIP+ LK +  IKL+LAP+ H A P S+P +EH ++
Subjt:  IKSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMI

A0A699J435 Uncharacterized protein2.1e-0544.44Show/hide
Query:  SAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMIASSKNPA
        SAGK N  T T  SS  PIG   D SA+ +V  VG +S   +   T+ G+K MLAP+S KA  +S+P   HGM   S +P+
Subjt:  SAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMIASSKNPA

A0A699SB53 Uncharacterized protein1.6e-0544.59Show/hide
Query:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGM
        KS GK N  TLTN SS+ P+G   DLS++ +V  VG +S   +  + + G++LMLAPKS +A  TS+P    G+
Subjt:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGM

A0A6P4D3L8 uncharacterized protein LOC1074843113.8e-0751.43Show/hide
Query:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPM
        KSAG  N STLT   S  P+G   DLSA+CKV ++G  S I N L  + GI+L+L PKSH AL     PM
Subjt:  KSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAATCTGCAGGGAAGACAAACTTATCAACATTGACCAATATGTCTTCAATCTTTCCGATAGGATGTGTAAGTGATCTTTCTGCCAACTGTAAGGTTACAGTTGT
TGGTCGCGCTTCTCCTATCCCTAACTGTTTAAAAACCGAGTATGGCATTAAGTTGATGCTCGCTCCTAAGTCTCACAAAGCTCTTCCTACATCTCTACCTCCAATGGAGC
ATGGAATGATAGCCTCCTCAAAAAACCCAGCTGAAACCCTCGTGCTTCTCGCACATCTTCTTCAACCTTCGGACGACGGCGCACATCTTCTTCAACCTTCGGACAACGGC
GCACATCTTCTTCAACCCTTGATATCTCTTTCCCTTCAACCATCAACGACGACTAGGGATCTTATCAATGGCGATTGGGTCTCACCGACGCCGACTCCACAGCTAGATTT
AAGACCAGTTTTCTCTTCTCACCGACGACGACAACGACATTTCTCTTCTAATCTACAGCAAGTGGGTTTTCGTGGTGGTCGTGGTTCAGATCTAACTTCGTTCGGGTTCG
TCTCTGTTCGTGGGTATTTCTTACAACTTGATCTCGGAATCTCAAGCAAAATGGGGAGGATGTCATACTTGGCTCTGAATAGTGATCCGCTAGTGGAGGAGATGATAAAT
GGCTTGCCTCCTTTGCTGTCATCCCTGGGTTTTCTACGAAGGCCACTTGCTATTGTTGCTGCTTTTCTCACAGCACTCAGCATCGCTTTTCTGAATGACAGCTCTGCAAA
TTGGTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAAAATCTGCAGGGAAGACAAACTTATCAACATTGACCAATATGTCTTCAATCTTTCCGATAGGATGTGTAAGTGATCTTTCTGCCAACTGTAAGGTTACAGTTGT
TGGTCGCGCTTCTCCTATCCCTAACTGTTTAAAAACCGAGTATGGCATTAAGTTGATGCTCGCTCCTAAGTCTCACAAAGCTCTTCCTACATCTCTACCTCCAATGGAGC
ATGGAATGATAGCCTCCTCAAAAAACCCAGCTGAAACCCTCGTGCTTCTCGCACATCTTCTTCAACCTTCGGACGACGGCGCACATCTTCTTCAACCTTCGGACAACGGC
GCACATCTTCTTCAACCCTTGATATCTCTTTCCCTTCAACCATCAACGACGACTAGGGATCTTATCAATGGCGATTGGGTCTCACCGACGCCGACTCCACAGCTAGATTT
AAGACCAGTTTTCTCTTCTCACCGACGACGACAACGACATTTCTCTTCTAATCTACAGCAAGTGGGTTTTCGTGGTGGTCGTGGTTCAGATCTAACTTCGTTCGGGTTCG
TCTCTGTTCGTGGGTATTTCTTACAACTTGATCTCGGAATCTCAAGCAAAATGGGGAGGATGTCATACTTGGCTCTGAATAGTGATCCGCTAGTGGAGGAGATGATAAAT
GGCTTGCCTCCTTTGCTGTCATCCCTGGGTTTTCTACGAAGGCCACTTGCTATTGTTGCTGCTTTTCTCACAGCACTCAGCATCGCTTTTCTGAATGACAGCTCTGCAAA
TTGGTTCTTTTAG
Protein sequenceShow/hide protein sequence
MIKSAGKTNLSTLTNMSSIFPIGCVSDLSANCKVTVVGRASPIPNCLKTEYGIKLMLAPKSHKALPTSLPPMEHGMIASSKNPAETLVLLAHLLQPSDDGAHLLQPSDNG
AHLLQPLISLSLQPSTTTRDLINGDWVSPTPTPQLDLRPVFSSHRRRQRHFSSNLQQVGFRGGRGSDLTSFGFVSVRGYFLQLDLGISSKMGRMSYLALNSDPLVEEMIN
GLPPLLSSLGFLRRPLAIVAAFLTALSIAFLNDSSANWFF