; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018354 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018354
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:23931622..23932867
RNA-Seq ExpressionLag0018354
SyntenyLag0018354
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]9.6e-2130.8Show/hide
Query:  FISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE--RNI---------KLVANKGVQWEKSQTK
        FI++VI+Q+ W++FCAHP++ +VPL                                     +P+ +  E   NI         + VA  G +W  S   
Subjt:  FISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE--RNI---------KLVANKGVQWEKSQTK

Query:  VKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPT
          T + S L P + VW HFLK+ L+PTTH  T+S D+++LL+ ++ G  IN+G +I  EI AC  ++ G LFF SLIT+LC+  +     +EE       
Subjt:  VKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPT

Query:  IDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPS
        ID   + ++ Q       +  T     PS S  A+ S
Subjt:  IDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPS

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.8e-2628.66Show/hide
Query:  FISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE--RNI---------KLVANKGVQWEKSQTK
        FI++VI+Q+ W++FCAHP++ +VPL                                     +P+ +  E  +NI         + VA  G +W  S   
Subjt:  FISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE--RNI---------KLVANKGVQWEKSQTK

Query:  VKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPT
          T + S L P + VW HFLK+RL+PTTH  T+S D+++LL+ ++ G  IN+G +I  EI AC  ++ G LFF SLIT+LC+  +     +EE       
Subjt:  VKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPT

Query:  IDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQ-----------LDKIRENLRTYWAYANERDEAIREFYLSIAP
        ID   + ++ Q       +  T     PS S  A+ S +          KAL     Q           L    +  + +WAY+ ERD A+++   +   
Subjt:  IDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQ-----------LDKIRENLRTYWAYANERDEAIREFYLSIAP

Query:  SITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDE
             FP FP+ +L   D + + E D++  N + E
Subjt:  SITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]8.1e-2032.73Show/hide
Query:  LKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPTID-MSLIR
        L P + VW HFLK+RL+PTTH  T+S D+++LLY ++ G  IN+G +I  EI AC  +++G LFF SLITQLC+  +     +EE       ID +++ R
Subjt:  LKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPTID-MSLIR

Query:  KLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQLDKIR---ENLRTYWAYANERDEAIREFYLSIAPSITRIFPDFPRSLLP
          Q+   +   + STS+ T  S S                 S+     Y  +  ++   +  + +WAY+ ERD A+++   +        FP FP+ LL 
Subjt:  KLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQLDKIR---ENLRTYWAYANERDEAIREFYLSIAPSITRIFPDFPRSLLP

Query:  QEDKDSDEEEDEEKENSSDE
          D + + E D++  N + E
Subjt:  QEDKDSDEEEDEEKENSSDE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]5.6e-2133.33Show/hide
Query:  PEFISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE-----------RNIKLVANKGVQWEKSQ
        P FI+ VI Q+ WQ FCAHP++ +VPL                                     +P+ +  E             ++ VA  G +W  S 
Subjt:  PEFISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE-----------RNIKLVANKGVQWEKSQ

Query:  TKVKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEE
            T + S L P + VW HFLK+RL+PTTH  T+S + V LLY ++ G  IN+G +I  EI AC  +++G LFF SLIT +C+  +     +EE
Subjt:  TKVKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]6.0e-2331.12Show/hide
Query:  IKLVANKGVQWEKSQTKVKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        ++ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH   +S D+++LL+ ++ G  IN+G +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  IKLVANKGVQWEKSQTKVKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  VKIVPSKDEEHHFFKPTIDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQLDKIRENLRTYWAYANERDEAIREF
           + ++++ H+     ID   + ++ Q       +  T     PS S  A+ S            KAL     Q +   +  + +WAY+ ERD A+++ 
Subjt:  VKIVPSKDEEHHFFKPTIDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQLDKIRENLRTYWAYANERDEAIREF

Query:  YLSIAPSITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDE
          +        FP FP+ +L   D + + E D++  N + E
Subjt:  YLSIAPSITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.7e-2130.8Show/hide
Query:  FISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE--RNI---------KLVANKGVQWEKSQTK
        FI++VI+Q+ W++FCAHP++ +VPL                                     +P+ +  E   NI         + VA  G +W  S   
Subjt:  FISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE--RNI---------KLVANKGVQWEKSQTK

Query:  VKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPT
          T + S L P + VW HFLK+ L+PTTH  T+S D+++LL+ ++ G  IN+G +I  EI AC  ++ G LFF SLIT+LC+  +     +EE       
Subjt:  VKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPT

Query:  IDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPS
        ID   + ++ Q       +  T     PS S  A+ S
Subjt:  IDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPS

A0A2P5BCG4 Uncharacterized protein (Fragment)2.8e-2628.66Show/hide
Query:  FISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE--RNI---------KLVANKGVQWEKSQTK
        FI++VI+Q+ W++FCAHP++ +VPL                                     +P+ +  E  +NI         + VA  G +W  S   
Subjt:  FISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE--RNI---------KLVANKGVQWEKSQTK

Query:  VKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPT
          T + S L P + VW HFLK+RL+PTTH  T+S D+++LL+ ++ G  IN+G +I  EI AC  ++ G LFF SLIT+LC+  +     +EE       
Subjt:  VKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPT

Query:  IDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQ-----------LDKIRENLRTYWAYANERDEAIREFYLSIAP
        ID   + ++ Q       +  T     PS S  A+ S +          KAL     Q           L    +  + +WAY+ ERD A+++   +   
Subjt:  IDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQ-----------LDKIRENLRTYWAYANERDEAIREFYLSIAP

Query:  SITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDE
             FP FP+ +L   D + + E D++  N + E
Subjt:  SITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDE

A0A2P5CEY2 Uncharacterized protein3.9e-2032.73Show/hide
Query:  LKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPTID-MSLIR
        L P + VW HFLK+RL+PTTH  T+S D+++LLY ++ G  IN+G +I  EI AC  +++G LFF SLITQLC+  +     +EE       ID +++ R
Subjt:  LKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPTID-MSLIR

Query:  KLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQLDKIR---ENLRTYWAYANERDEAIREFYLSIAPSITRIFPDFPRSLLP
          Q+   +   + STS+ T  S S                 S+     Y  +  ++   +  + +WAY+ ERD A+++   +        FP FP+ LL 
Subjt:  KLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQLDKIR---ENLRTYWAYANERDEAIREFYLSIAPSITRIFPDFPRSLLP

Query:  QEDKDSDEEEDEEKENSSDE
          D + + E D++  N + E
Subjt:  QEDKDSDEEEDEEKENSSDE

A0A2P5DAQ2 Uncharacterized protein2.7e-2133.33Show/hide
Query:  PEFISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE-----------RNIKLVANKGVQWEKSQ
        P FI+ VI Q+ WQ FCAHP++ +VPL                                     +P+ +  E             ++ VA  G +W  S 
Subjt:  PEFISKVISQYKWQEFCAHPQEAVVPL-------------------------------------EPLGQADE-----------RNIKLVANKGVQWEKSQ

Query:  TKVKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEE
            T + S L P + VW HFLK+RL+PTTH  T+S + V LLY ++ G  IN+G +I  EI AC  +++G LFF SLIT +C+  +     +EE
Subjt:  TKVKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEE

A0A2P5DXM3 Uncharacterized protein2.9e-2331.12Show/hide
Query:  IKLVANKGVQWEKSQTKVKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        ++ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH   +S D+++LL+ ++ G  IN+G +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  IKLVANKGVQWEKSQTKVKTLVPSDLKPESTVWLHFLKNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  VKIVPSKDEEHHFFKPTIDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQLDKIRENLRTYWAYANERDEAIREF
           + ++++ H+     ID   + ++ Q       +  T     PS S  A+ S            KAL     Q +   +  + +WAY+ ERD A+++ 
Subjt:  VKIVPSKDEEHHFFKPTIDMSLIRKLQQNNIQRKDKASTSQATSPSGSSMASPSQHSPFTGPSPSSKALAIAYRQLDKIRENLRTYWAYANERDEAIREF

Query:  YLSIAPSITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDE
          +        FP FP+ +L   D + + E D++  N + E
Subjt:  YLSIAPSITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCTCTCCTGCAGTTCCTCCTACCGTCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCTAAAAATCCATTCCCGAGAGCTGGAGTAGTGCC
AGAGTTCATAAGCAAAGTTATCTCCCAGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTAGTGCCTTTAGAACCCCTCGGCCAAGCGGATGAAAGAAACA
TAAAACTTGTGGCCAACAAGGGAGTTCAATGGGAAAAGTCTCAGACGAAGGTGAAGACTCTAGTGCCAAGCGACTTAAAGCCAGAATCGACAGTTTGGCTTCACTTTCTG
AAAAATCGCTTGATGCCAACCACCCACGATAGCACGATCTCAGTGGATAAAGTTATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAACATCGGGAGCATTATCAG
GGATGAGATTTTAGCCTGTGGAAGAAAACGAGCAGGTAAACTTTTCTTTGGATCACTCATCACCCAGCTCTGTCAAAGGGTGAAGATAGTTCCAAGCAAGGACGAGGAGC
ACCATTTCTTTAAGCCAACCATTGACATGTCCTTGATCAGAAAGCTCCAACAGAACAACATCCAGAGGAAAGATAAAGCCTCCACATCTCAGGCCACTTCACCTTCAGGG
TCGAGCATGGCTTCTCCATCCCAGCACAGTCCTTTTACAGGGCCCTCACCGTCATCGAAAGCCCTAGCTATTGCCTACCGCCAGCTTGATAAAATCAGGGAAAACCTGAG
GACATATTGGGCATATGCAAACGAGAGGGATGAAGCCATCAGAGAGTTCTATCTCTCGATTGCCCCAAGTATTACTCGGATTTTTCCCGATTTCCCTCGGTCGTTGCTGC
CTCAAGAAGACAAGGATTCGGATGAAGAAGAAGATGAAGAAAAAGAAAATTCCTCGGACGAGGACTATGGGAGTTTCCTGACCCCTTTACTTGCTGTTTTTTTTGTCCAT
AATATTGTTTTGTTGCTTGCTGTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCTCTCCTGCAGTTCCTCCTACCGTCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCTAAAAATCCATTCCCGAGAGCTGGAGTAGTGCC
AGAGTTCATAAGCAAAGTTATCTCCCAGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTAGTGCCTTTAGAACCCCTCGGCCAAGCGGATGAAAGAAACA
TAAAACTTGTGGCCAACAAGGGAGTTCAATGGGAAAAGTCTCAGACGAAGGTGAAGACTCTAGTGCCAAGCGACTTAAAGCCAGAATCGACAGTTTGGCTTCACTTTCTG
AAAAATCGCTTGATGCCAACCACCCACGATAGCACGATCTCAGTGGATAAAGTTATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAACATCGGGAGCATTATCAG
GGATGAGATTTTAGCCTGTGGAAGAAAACGAGCAGGTAAACTTTTCTTTGGATCACTCATCACCCAGCTCTGTCAAAGGGTGAAGATAGTTCCAAGCAAGGACGAGGAGC
ACCATTTCTTTAAGCCAACCATTGACATGTCCTTGATCAGAAAGCTCCAACAGAACAACATCCAGAGGAAAGATAAAGCCTCCACATCTCAGGCCACTTCACCTTCAGGG
TCGAGCATGGCTTCTCCATCCCAGCACAGTCCTTTTACAGGGCCCTCACCGTCATCGAAAGCCCTAGCTATTGCCTACCGCCAGCTTGATAAAATCAGGGAAAACCTGAG
GACATATTGGGCATATGCAAACGAGAGGGATGAAGCCATCAGAGAGTTCTATCTCTCGATTGCCCCAAGTATTACTCGGATTTTTCCCGATTTCCCTCGGTCGTTGCTGC
CTCAAGAAGACAAGGATTCGGATGAAGAAGAAGATGAAGAAAAAGAAAATTCCTCGGACGAGGACTATGGGAGTTTCCTGACCCCTTTACTTGCTGTTTTTTTTGTCCAT
AATATTGTTTTGTTGCTTGCTGTTTTTTAG
Protein sequenceShow/hide protein sequence
MDASPAVPPTVSPAKPKGKSPKAASPKNPFPRAGVVPEFISKVISQYKWQEFCAHPQEAVVPLEPLGQADERNIKLVANKGVQWEKSQTKVKTLVPSDLKPESTVWLHFL
KNRLMPTTHDSTISVDKVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPSKDEEHHFFKPTIDMSLIRKLQQNNIQRKDKASTSQATSPSG
SSMASPSQHSPFTGPSPSSKALAIAYRQLDKIRENLRTYWAYANERDEAIREFYLSIAPSITRIFPDFPRSLLPQEDKDSDEEEDEEKENSSDEDYGSFLTPLLAVFFVH
NIVLLLAVF