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Lag0018373 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018373
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr5:24990753..24991558
RNA-Seq ExpressionLag0018373
SyntenyLag0018373
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033299.1 uncharacterized protein E6C27_scaffold845G001100 [Cucumis melo var. makuwa]6.4e-3242.29Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        MRQ+E + PS+R ELE V   KW RAFF R +Y ++TTN SES+N+ L E RELPV+  LE+IR LIQ+WFY+RR+ +SFQR   S + ED++R SL + 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFV-----------------------SFYFFCNDVH-------PIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCG
        R+M++  V                        FY+  N ++        IG V Q  N+     D ILPP  KR   RPKKKR  S  ++  S  C RCG
Subjt:  RTMDVSFV-----------------------SFYFFCNDVH-------PIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCG

Query:  Q
        +
Subjt:  Q

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]6.1e-3543.78Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        MRQ+E + PS+R ELE V   KWARAFF R +Y ++TTN SES+N+ L E RELPV+ LLE+   LIQ+WFY+RR+ +SFQR   S + ED++R SL + 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFV-----------------------SFYFFCNDVH-------PIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCG
        R+M++  V                        FY+  N ++       PIGTV Q  N++    D ILPP  KR A RPKKKR  S  ++  S  C RCG
Subjt:  RTMDVSFV-----------------------SFYFFCNDVH-------PIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCG

Query:  Q
        +
Subjt:  Q

KAA0067174.1 protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo var. makuwa]8.9e-3447.95Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        +RQ+E + PS+R ELE V   KWARAFF R +Y ++TTN SES+N+ L E RELPV+ LLE+IR LIQ+WFY+RR+ +SFQR   S + ED++R SL + 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFVSFYFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ
        R+M++  V       D H      + P       D ILPP  KR A RPKKKR  S  ++  S +C RCG+
Subjt:  RTMDVSFVSFYFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ

TYK26023.1 protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo var. makuwa]8.9e-3447.95Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        +RQ+E + PS+R ELE V   KWARAFF R +Y ++TTN SES+N+ L E RELPV+ LLE+IR LIQ+WFY+RR+ +SFQR   S + ED++R SL + 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFVSFYFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ
        R+M++  V       D H      + P       D ILPP  KR A RPKKKR  S  ++  S +C RCG+
Subjt:  RTMDVSFVSFYFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ

XP_022157216.1 uncharacterized protein LOC111023978 [Momordica charantia]1.6e-3537.34Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        MR +E +VP IR EL+E+ + KWARAF  +N++ +MTTN SES+N+   EARELPV+ LL+ IR L+Q+WFY+RRSF+S+Q+   +PW  + LR+SLKE 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFVSFYFF-----------------CN--------------------------------------------DVHPIGTVKQFPNSNVDEEDCILP
        RTMD+  V  Y +                 CN                                            +VHPIG ++        ++  ILP
Subjt:  RTMDVSFVSFYFF-----------------CN--------------------------------------------DVHPIGTVKQFPNSNVDEEDCILP

Query:  PSTKRTAARPKKKRILSRFDRTTSFKCGRCGQI
        P+ KR+A RP+KKR++SR + T + +CGRC ++
Subjt:  PSTKRTAARPKKKRILSRFDRTTSFKCGRCGQI

TrEMBL top hitse value%identityAlignment
A0A5A7TC03 ZnF_PMZ domain-containing protein3.1e-3238.36Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        MRQ+E + PS+R ELE V   KWARAFF R +Y ++TTN SES+N+ L + RELPV+ LLE+IR LIQ+WFY+RR+ + FQR   S + ED++R SL + 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDV---------------SFV---------------------------------------SFYFFCNDVH-------PIGTVKQFPNSNVDEEDCILP
        R+M++                FV                                        FY+  N ++       PIGTV Q  N++    D ILP
Subjt:  RTMDV---------------SFV---------------------------------------SFYFFCNDVH-------PIGTVKQFPNSNVDEEDCILP

Query:  PSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ
        P  KR A RPKKKR  S  ++  S +C RCG+
Subjt:  PSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ

A0A5A7V1Z6 CCHC-type domain-containing protein3.0e-3543.78Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        MRQ+E + PS+R ELE V   KWARAFF R +Y ++TTN SES+N+ L E RELPV+ LLE+   LIQ+WFY+RR+ +SFQR   S + ED++R SL + 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFV-----------------------SFYFFCNDVH-------PIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCG
        R+M++  V                        FY+  N ++       PIGTV Q  N++    D ILPP  KR A RPKKKR  S  ++  S  C RCG
Subjt:  RTMDVSFV-----------------------SFYFFCNDVH-------PIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCG

Query:  Q
        +
Subjt:  Q

A0A5A7VII8 Protein FAR1-RELATED SEQUENCE 5-like4.3e-3447.95Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        +RQ+E + PS+R ELE V   KWARAFF R +Y ++TTN SES+N+ L E RELPV+ LLE+IR LIQ+WFY+RR+ +SFQR   S + ED++R SL + 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFVSFYFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ
        R+M++  V       D H      + P       D ILPP  KR A RPKKKR  S  ++  S +C RCG+
Subjt:  RTMDVSFVSFYFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ

A0A5D3DQU8 Protein FAR1-RELATED SEQUENCE 5-like4.3e-3447.95Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        +RQ+E + PS+R ELE V   KWARAFF R +Y ++TTN SES+N+ L E RELPV+ LLE+IR LIQ+WFY+RR+ +SFQR   S + ED++R SL + 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFVSFYFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ
        R+M++  V       D H      + P       D ILPP  KR A RPKKKR  S  ++  S +C RCG+
Subjt:  RTMDVSFVSFYFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQ

A0A6J1DXB4 uncharacterized protein LOC1110239787.8e-3637.34Show/hide
Query:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK
        MR +E +VP IR EL+E+ + KWARAF  +N++ +MTTN SES+N+   EARELPV+ LL+ IR L+Q+WFY+RRSF+S+Q+   +PW  + LR+SLKE 
Subjt:  MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEK

Query:  RTMDVSFVSFYFF-----------------CN--------------------------------------------DVHPIGTVKQFPNSNVDEEDCILP
        RTMD+  V  Y +                 CN                                            +VHPIG ++        ++  ILP
Subjt:  RTMDVSFVSFYFF-----------------CN--------------------------------------------DVHPIGTVKQFPNSNVDEEDCILP

Query:  PSTKRTAARPKKKRILSRFDRTTSFKCGRCGQI
        P+ KR+A RP+KKR++SR + T + +CGRC ++
Subjt:  PSTKRTAARPKKKRILSRFDRTTSFKCGRCGQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAAATGGAGGATATAGTTCCTTCCATTAGGTCTGAATTAGAAGAAGTAGCACATTCTAAATGGGCGAGGGCATTTTTTGTGAGGAACAAATATACCATAATGAC
AACAAATGCATCTGAGAGTCTTAATGCAATTTTGTTGGAGGCGCGTGAGCTACCTGTTGTTCCCCTTCTCGAGGCCATACGAAGATTGATTCAACAATGGTTCTATGATC
GTCGGAGTTTTTTCAGTTTCCAACGTGCTCACCCTTCGCCATGGGTTGAGGATCTGCTTCGTACATCCCTGAAGGAAAAACGAACAATGGATGTGAGTTTTGTTTCATTC
TACTTCTTTTGTAATGATGTACATCCAATTGGAACTGTTAAACAATTCCCCAACTCAAATGTTGATGAGGAGGATTGCATTCTCCCGCCAAGCACTAAGCGAACAGCTGC
ACGTCCGAAGAAAAAACGGATTTTGTCTCGTTTTGATAGGACAACATCCTTCAAGTGCGGGCGTTGTGGTCAAATTGTGTTGGGTTTTATGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAAATGGAGGATATAGTTCCTTCCATTAGGTCTGAATTAGAAGAAGTAGCACATTCTAAATGGGCGAGGGCATTTTTTGTGAGGAACAAATATACCATAATGAC
AACAAATGCATCTGAGAGTCTTAATGCAATTTTGTTGGAGGCGCGTGAGCTACCTGTTGTTCCCCTTCTCGAGGCCATACGAAGATTGATTCAACAATGGTTCTATGATC
GTCGGAGTTTTTTCAGTTTCCAACGTGCTCACCCTTCGCCATGGGTTGAGGATCTGCTTCGTACATCCCTGAAGGAAAAACGAACAATGGATGTGAGTTTTGTTTCATTC
TACTTCTTTTGTAATGATGTACATCCAATTGGAACTGTTAAACAATTCCCCAACTCAAATGTTGATGAGGAGGATTGCATTCTCCCGCCAAGCACTAAGCGAACAGCTGC
ACGTCCGAAGAAAAAACGGATTTTGTCTCGTTTTGATAGGACAACATCCTTCAAGTGCGGGCGTTGTGGTCAAATTGTGTTGGGTTTTATGCCCTAA
Protein sequenceShow/hide protein sequence
MRQMEDIVPSIRSELEEVAHSKWARAFFVRNKYTIMTTNASESLNAILLEARELPVVPLLEAIRRLIQQWFYDRRSFFSFQRAHPSPWVEDLLRTSLKEKRTMDVSFVSF
YFFCNDVHPIGTVKQFPNSNVDEEDCILPPSTKRTAARPKKKRILSRFDRTTSFKCGRCGQIVLGFMP