CuGenDBv2

Gene ID	Lag0018374
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Protein Ycf2-like
Genome location	chr5:25004927..25008419
RNA-Seq Expression	Lag0018374
Synteny	Lag0018374
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0051382.1 protein Ycf2-like [Cucumis melo var. makuwa]

9.6e-29

55.86

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK
        I K++ + VD +HIIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   I   GFIF ILAWAYEV P LS+P NFFA ++   +PRI+NW ADTQ K
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK

Query:  WKDLERRIFES
        WKDL++++F+S
Subjt:  WKDLERRIFES

KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.5e-29

54.46

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK
        I K++ + VD ++IIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   I   GFIFPILAWAYEV+P LS+P NFFA +++  +PRI+NW AD Q K
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK

Query:  WKDLERRIFESI
        WKDL++++F+S+
Subjt:  WKDLERRIFESI

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.8e-30

55.36

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGH--VNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQS
        I K++ + VD +HIIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   +++  GFIFPILAWAYEV+P LS+P NFFA +++  +PRI+NW ADTQ 
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGH--VNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQS

Query:  KWKDLERRIFES
        KWKDL++++F+S
Subjt:  KWKDLERRIFES

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]

1.5e-29

54.46

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK
        I K++ + VD ++IIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   I   GFIFPILAWAYEV+P LS+P NFFA +++  +PRI+NW AD Q K
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK

Query:  WKDLERRIFESI
        WKDL++++F+S+
Subjt:  WKDLERRIFESI

TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]

9.6e-29

55.86

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK
        I K++ + VD +HIIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   I   GFIF ILAWAYEV P LS+P NFFA ++   +PRI+NW ADTQ K
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK

Query:  WKDLERRIFES
        WKDL++++F+S
Subjt:  WKDLERRIFES

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U6E1 Protein Ycf2-like

4.7e-29

55.86

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK
        I K++ + VD +HIIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   I   GFIF ILAWAYEV P LS+P NFFA ++   +PRI+NW ADTQ K
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK

Query:  WKDLERRIFES
        WKDL++++F+S
Subjt:  WKDLERRIFES

A0A5A7UD30 Protein Ycf2-like

7.2e-30

54.46

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK
        I K++ + VD ++IIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   I   GFIFPILAWAYEV+P LS+P NFFA +++  +PRI+NW AD Q K
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK

Query:  WKDLERRIFESI
        WKDL++++F+S+
Subjt:  WKDLERRIFESI

A0A5D3CEX9 Protein Ycf2-like

8.5e-31

55.36

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGH--VNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQS
        I K++ + VD +HIIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   +++  GFIFPILAWAYEV+P LS+P NFFA +++  +PRI+NW ADTQ 
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGH--VNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQS

Query:  KWKDLERRIFES
        KWKDL++++F+S
Subjt:  KWKDLERRIFES

A0A5D3DCN3 Protein Ycf2-like

7.2e-30

54.46

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK
        I K++ + VD ++IIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   I   GFIFPILAWAYEV+P LS+P NFFA +++  +PRI+NW AD Q K
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK

Query:  WKDLERRIFESI
        WKDL++++F+S+
Subjt:  WKDLERRIFESI

A0A5D3DKA6 Protein Ycf2-like

4.7e-29

55.86

Show/hide

Query:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK
        I K++ + VD +HIIMVDD+E+F+GYPWGR+AF++LV+F+ +   + G   I   GFIF ILAWAYEV P LS+P NFFA ++   +PRI+NW ADTQ K
Subjt:  ITKKDTVHVDMNHIIMVDDEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNI-YEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSK

Query:  WKDLERRIFES
        WKDL++++F+S
Subjt:  WKDLERRIFES

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G28810.1 Domain of unknown function (DUF1985)

3.6e-05

33.78

Show/hide

Query:  DEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNW
        D   F  YPWGR+AFD L+  V K  +  G   +  G +  +L W YE +P +     F   K T T   +++W
Subjt:  DEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNW

AT5G45570.1 Ulp1 protease family protein

1.8e-04

33.78

Show/hide

Query:  DEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNW
        D   F  YPWGR+AFD L   V K  +  G   +  G +  +L W YE +P +     F  RK   T   +++W
Subjt:  DEELFNGYPWGRLAFDMLVEFVKKPYRAGGHVNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTAAAAGCAAACACAGCTTCCAAGGAAAGGACACAAACTAGTCAAAGACTTTTGGCCACGGGGATAACTTCAGGGAAAAAGCCAAAACATATAGGGCTAATTACATT
AAATAGTGACGGAGAGGAGGATCATATTCTAAAAAGTGGGAGCAAGCAAAAGAAAAGACAAGGCAAAACATTAAAAAAAGAGCAAAGGGAAGAGGAAAATGCTGAACCTA
AGTCCACCAAGAAGAAAAGGGCAAAGATCACAAAAAAGGACACAGTTCACGTAGACATGAACCATATAATCATGGTTGATGATGAGGAATTATTCAATGGGTATCCTTGG
GGAAGGTTAGCATTTGACATGTTGGTTGAGTTCGTGAAAAAGCCTTACAGAGCAGGGGGCCACGTGAATATCTATGAGGGCTTCATATTTCCCATATTAGCATGGGCTTA
TGAAGTTATGCCTATACTAAGCAGCCCACATAATTTCTTTGCAAGAAAAATGACATATACAATTCCAAGGATTGTCAATTGGCTGGCAGACACACAGTCGAAATGGAAGG
ACCTCGAAAGAAGAATATTTGAGTCAATAGAGGAGCTGGATCGTATTGGAGAAGAAGAGGAAAATGATGTGGATAAAGAAGAAACTTGTGATGCTACAAATAATCCACAA
ATTCAAAGAAAAAGAGATGATGAAGAAGACAGAGCACCTGGACAAGGCCCAAACAATCAGTTAGTCAACATAACAATGACCACAAACATAACCTCACAAGGTGCTGATGG
AAAAAAACAGGATGGGAATGAAGGCAACAAGAACACACAACAACAGAATGAACGTGCTAAATGGCCAACTATTGGCACTATTATAGAGAATAAATCATTGCCTATCAATC
CCAAGTGGAGTGTTGTTAAACGACCATTTGAGATTAATAAGAATGTAAGAAGAGTTACTGGAGTTAGTGGGAGTCTTTTACCTAAAATACTAGACAAGGAAGCGACAATT
ACAGTAACAGGGGACTACATCAAAGCAATGAAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVKANTASKERTQTSQRLLATGITSGKKPKHIGLITLNSDGEEDHILKSGSKQKKRQGKTLKKEQREEENAEPKSTKKKRAKITKKDTVHVDMNHIIMVDDEELFNGYPW
GRLAFDMLVEFVKKPYRAGGHVNIYEGFIFPILAWAYEVMPILSSPHNFFARKMTYTIPRIVNWLADTQSKWKDLERRIFESIEELDRIGEEEENDVDKEETCDATNNPQ
IQRKRDDEEDRAPGQGPNNQLVNITMTTNITSQGADGKKQDGNEGNKNTQQQNERAKWPTIGTIIENKSLPINPKWSVVKRPFEINKNVRRVTGVSGSLLPKILDKEATI
TVTGDYIKAMK

Lag0018374 (gene) of Sponge gourd (AG-4) v1 genome