| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis] | 2.8e-78 | 36.63 | Show/hide |
Query: MRSNKVVNLFPLDLEIDRTLRTIRRDKRLAEAMTHQDEAPKAIRDFLQLVLPIENSGIVYAPIQATNFELKTGLIQMARNNSFKGHPSEDPHSHLRSFSE
MR + ++ P+D EI+RTLR++RR+K LA A ++ P+ ++D+++ V+ S I+ PI A NFELK LI M + F G P +DP+ HL F E
Subjt: MRSNKVVNLFPLDLEIDRTLRTIRRDKRLAEAMTHQDEAPKAIRDFLQLVLPIENSGIVYAPIQATNFELKTGLIQMARNNSFKGHPSEDPHSHLRSFSE
Query: ICGTVKMNGVPANAIGLRLFPFFYKTRQR-------------------------------------IGSNQS-----------------RRA--------
IC TVK+NGV + I LRLFPF + + R IG + RR
Subjt: ICGTVKMNGVPANAIGLRLFPFFYKTRQR-------------------------------------IGSNQS-----------------RRA--------
Query: --ALLFYNGLNPSTKTVLDTSAGGSFLSKKVTKAKDLLEEMAATSYQWPTEREAISKKAGIYELDELSSLKAQMASLTNALNKLTSSEVVKSISTLAEGY
+FYNGLN T+T++D ++GG+ +SK A LLEEMA+ +YQWPTER K AGI++L+ +++L AQ+A+L++ ++ LT+ + +S LA
Subjt: --ALLFYNGLNPSTKTVLDTSAGGSFLSKKVTKAKDLLEEMAATSYQWPTEREAISKKAGIYELDELSSLKAQMASLTNALNKLTSSEVVKSISTLAEGY
Query: SKKEGQDV--EEVQYVGNKPFT---QGVPNFYHPSLRNHENFSYSNTKNVL--KLPPGFASSSVPEKKNNLEEMVALFIKEQRVLNV-------NLQTTV
+ E+VQYV N+ + +PN+YHP LRNHEN SY NTKNVL + PPGF S E+K +LE+ + F++E N++T
Subjt: SKKEGQDV--EEVQYVGNKPFT---QGVPNFYHPSLRNHENFSYSNTKNVL--KLPPGFASSSVPEKKNNLEEMVALFIKEQRVLNV-------NLQTTV
Query: NNHDTTLKNMEVQIRHIASAVNALQKGKFPSDTEPNPREQCKMVTLRSGRKDERQD-------------DRDREKLNEEEVVPCNHHDKGLHISPPKRRG
+N +KN+EVQI +A+ +NA Q+G FPS+TE NP+EQCK +TLRSG++ ER + + K+ E+E+V N + +P
Subjt: NNHDTTLKNMEVQIRHIASAVNALQKGKFPSDTEPNPREQCKMVTLRSGRKDERQD-------------DRDREKLNEEEVVPCNHHDKGLHISPPKRRG
Query: ECPTFDYRELPFPQRFKNVKLDEQFQKFLEMF-KLTVNIPLVDALK
+ P LP+PQRF+ KLD+QF KFL++F K+ +NIP DAL+
Subjt: ECPTFDYRELPFPQRFKNVKLDEQFQKFLEMF-KLTVNIPLVDALK
|
|
| WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002] | 2.9e-75 | 41.67 | Show/hide |
Query: LIKYLTFHFEGYRRLRFLLIDWEYCMRSNKVVNLFPLDLEIDRTLRTIRRDKRLAEAMTHQDEAPKAIRDFLQLVLPIENSGIVYAPIQATNFELKTGLI
+I YL F+F + L W R N NL PLD EIDRT R R L + +E PKAIRD+ Q LP GI+ PI NFELK GLI
Subjt: LIKYLTFHFEGYRRLRFLLIDWEYCMRSNKVVNLFPLDLEIDRTLRTIRRDKRLAEAMTHQDEAPKAIRDFLQLVLPIENSGIVYAPIQATNFELKTGLI
Query: QMARNNSFKGHPSEDPHSHLRSFSEICGTVKMNGVPANAIGLRLFPFFYKTRQR---------------------------IGSNQSRRAAL--------
QMAR +F+G +EDPH HLRSF EICGTVKMNGV +AI LRLFPF + R + +Q R +
Subjt: QMARNNSFKGHPSEDPHSHLRSFSEICGTVKMNGVPANAIGLRLFPFFYKTRQR---------------------------IGSNQSRRAAL--------
Query: -----------------------------LFYNGLNPSTKTVLDTSAGGSFLSKKVTKAKDLLEEMAATSYQWPTEREA--ISKKAGIYELDELSSLKAQ
LFYNGL STK++LD +AGGS SK +A +LE++A TSY WP ER + I K AG+YE+DE++SLKAQ
Subjt: -----------------------------LFYNGLNPSTKTVLDTSAGGSFLSKKVTKAKDLLEEMAATSYQWPTEREA--ISKKAGIYELDELSSLKAQ
Query: MASLTNALNKLTSSEVVK----SISTLAEGYSKKEGQ-DVEEVQYVGNKPFT----QGVPNFYHPSLRNHENFSYSNTKNVLKLPPGFASSSVPEKKNNL
MASLTNAL+KLT+ + SI++LA S+ D E YV + Q +P YHP+LRNHENFSY+N KNVL+ P GF + + K ++L
Subjt: MASLTNALNKLTSSEVVK----SISTLAEGYSKKEGQ-DVEEVQYVGNKPFT----QGVPNFYHPSLRNHENFSYSNTKNVLKLPPGFASSSVPEKKNNL
Query: EEMVALFIKEQRVLNVNLQ-------TTVNNHDTTLKNMEVQIRHIASAVNALQKGKFPSDTEPNPREQCKMVTLRSGRK
E+++ F+KE R L+ +TV + L+N+EVQ+ + +++ +QKGKFPS E NPRE+CK VTLRSG+K
Subjt: EEMVALFIKEQRVLNVNLQ-------TTVNNHDTTLKNMEVQIRHIASAVNALQKGKFPSDTEPNPREQCKMVTLRSGRK
|
|
| XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] | 8.4e-75 | 37.13 | Show/hide |
Query: QDEAPKAIRDFLQLVLPIENSGIVYAPIQATNFELKTGLIQMARNNSFKGHPSEDPHSHLRSFSEICGTVKMNGVPANAIGLRLFPFFYKTRQR------
Q+ P+ ++D+++ ++ SGI I A NFELK LI M + F G P +DP+ HL F EIC T+KMNGV + I LRLFPF + + R
Subjt: QDEAPKAIRDFLQLVLPIENSGIVYAPIQATNFELKTGLIQMARNNSFKGHPSEDPHSHLRSFSEICGTVKMNGVPANAIGLRLFPFFYKTRQR------
Query: ----IGSNQ-------------SRRAAL-----------------------------------------LFYNGLNPSTKTVLDTSAGGSFLSKKVTKAK
I S Q ++ A L +FYNGLN T+T++D ++GG+ +SK A
Subjt: ----IGSNQ-------------SRRAAL-----------------------------------------LFYNGLNPSTKTVLDTSAGGSFLSKKVTKAK
Query: DLLEEMAATSYQWPTEREAISKKAGIYELDELSSLKAQMASLTNALNKLTSSEVVKSISTLAEGYSKKEGQDV--EEVQYVGNKPFT---QGVPNFYHPS
LLEEMA+ +YQWPTER K AGI+EL+ ++L AQ+ASL++ ++ LT+ + + +A + E+VQY+ N+ + +PN+YHP
Subjt: DLLEEMAATSYQWPTEREAISKKAGIYELDELSSLKAQMASLTNALNKLTSSEVVKSISTLAEGYSKKEGQDV--EEVQYVGNKPFT---QGVPNFYHPS
Query: LRNHENFSYSNTKNVLKLPPGFASSSVPEKKNNLEEMVALFIKEQRVLNV-------NLQTTVNNHDTTLKNMEVQIRHIASAVNALQKGKFPSDTEPNP
LRNHENFSY NTKNVL+ PPGF S EKK +LE+ + F++E + N++T +N T+KN+EVQI +A+ +NA Q+G FPS+TE NP
Subjt: LRNHENFSYSNTKNVLKLPPGFASSSVPEKKNNLEEMVALFIKEQRVLNV-------NLQTTVNNHDTTLKNMEVQIRHIASAVNALQKGKFPSDTEPNP
Query: REQCKMVTLRSGRKDERQDDRDRE-------------KLNEEEVVPCNHHDKGLHISPPKRRGECPTFDYRELPFPQRFKNVKLDEQFQKFLEMF-KLTV
+EQCK +TLRSGR+ ER ++ E K+ EEE+V + + P + P LP+PQRF+ KLD+QF KFL++F K+ +
Subjt: REQCKMVTLRSGRKDERQDDRDRE-------------KLNEEEVVPCNHHDKGLHISPPKRRGECPTFDYRELPFPQRFKNVKLDEQFQKFLEMF-KLTV
Query: NIPLVDALK
NIP DAL+
Subjt: NIPLVDALK
|
|
| XP_038903565.1 DNA mismatch repair protein MSH5 isoform X2 [Benincasa hispida] | 1.6e-73 | 53.19 | Show/hide |
Query: RVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR----------------
RVGVSY DSSIRQLHVLE+WEDGSMEYPLI+LVKYQA PLMIY+STK EESFLAALQRSDGMSEAPTVKLVKSSI SYEQAWHR
Subjt: RVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR----------------
Query: -------------------------------------------------------------------------------------------FSVFGMMNK
FSVFGMMNK
Subjt: -------------------------------------------------------------------------------------------FSVFGMMNK
Query: ------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGISENLGD
IS F+SSDELMHSLR+TLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKS CSLLHVNKIFEVG+SENL +
Subjt: ------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGISENLGD
Query: NMQYLNLDIVEKANSCISTELAYVYELVI
NM+YLNLDIVEKAN+CI+TELAYVYELVI
Subjt: NMQYLNLDIVEKANSCISTELAYVYELVI
|
|
| XP_038903566.1 DNA mismatch repair protein MSH5 isoform X3 [Benincasa hispida] | 1.6e-73 | 53.19 | Show/hide |
Query: RVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR----------------
RVGVSY DSSIRQLHVLE+WEDGSMEYPLI+LVKYQA PLMIY+STK EESFLAALQRSDGMSEAPTVKLVKSSI SYEQAWHR
Subjt: RVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR----------------
Query: -------------------------------------------------------------------------------------------FSVFGMMNK
FSVFGMMNK
Subjt: -------------------------------------------------------------------------------------------FSVFGMMNK
Query: ------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGISENLGD
IS F+SSDELMHSLR+TLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKS CSLLHVNKIFEVG+SENL +
Subjt: ------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGISENLGD
Query: NMQYLNLDIVEKANSCISTELAYVYELVI
NM+YLNLDIVEKAN+CI+TELAYVYELVI
Subjt: NMQYLNLDIVEKANSCISTELAYVYELVI
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L665 DNA_MISMATCH_REPAIR_2 domain-containing protein | 1.5e-77 | 51.94 | Show/hide |
Query: MASSLLRVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR----------
+AS LLRVGVSY DSSIRQLHVLE+WEDGS+EYPLI+LVKYQA PLMIY+STK EESFLAALQRSDGMSEAPTVKLVKSSI SYEQAWHR
Subjt: MASSLLRVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR----------
Query: -------------------------------------------------------------------------------------------------FSV
FSV
Subjt: -------------------------------------------------------------------------------------------------FSV
Query: FGMMNK------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGI
FGMMNK IS F+SSDELMHSLR+TLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKS CSLLHVNKIFEVG+
Subjt: FGMMNK------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGI
Query: SENLGDNMQYLNLDIVEKANSCISTELAYVYELVIISYFP--GSLSLSYALQ-MYITIIE
SENL +NM+Y NLDIVEKAN+CI+TELAYVYELVI+SYFP G L +S + + Y TI++
Subjt: SENLGDNMQYLNLDIVEKANSCISTELAYVYELVIISYFP--GSLSLSYALQ-MYITIIE
|
|
| A0A6J1DCL3 DNA mismatch repair protein MSH5 | 2.9e-73 | 52.89 | Show/hide |
Query: RVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR----------------
RVGVSY DSSIRQLHVLE+WEDGSM++PLIELVKYQA PLMIY+STK EESFLAALQRSDGMSEAPT+KLVKSSI SYEQAWHR
Subjt: RVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR----------------
Query: -------------------------------------------------------------------------------------------FSVFGMMNK
FSVFGMMNK
Subjt: -------------------------------------------------------------------------------------------FSVFGMMNK
Query: ------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGISENLGD
IS FLSS+ELMHSLR+TLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKS CSLLHVNKIFEVG+SENL D
Subjt: ------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGISENLGD
Query: NMQYLNLDIVEKANSCISTELAYVYELVI
NM+YLNLD+VEKANSCI+TELAYVYELVI
Subjt: NMQYLNLDIVEKANSCISTELAYVYELVI
|
|
| A0A6J1F178 DNA mismatch repair protein MSH5 isoform X4 | 2.9e-73 | 52.1 | Show/hide |
Query: ASSLLRVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR-----------
AS LLRVGVSY DSSIRQLHVL++WEDGSMEYPLI+LVKYQA PLMIY+STK EESFLAALQRSDG+SEAPTVKLVKSSI SYEQAWHR
Subjt: ASSLLRVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR-----------
Query: ------------------------------------------------------------------------------------------------FSVF
FSVF
Subjt: ------------------------------------------------------------------------------------------------FSVF
Query: GMMNK------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGIS
GMMNK I+ F+SS+ELMHSLR+TLK VKDIPHILKKFNSPSSTYSSGDWT+FLKS CSLLHVNKIFEVG+S
Subjt: GMMNK------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGIS
Query: ENLGDNMQYLNLDIVEKANSCISTELAYVYELVI
ENL DNM+YLNLDIVEKA+SCI+TELAYVYELVI
Subjt: ENLGDNMQYLNLDIVEKANSCISTELAYVYELVI
|
|
| A0A6J1L1D5 DNA mismatch repair protein MSH5 isoform X1 | 3.8e-73 | 51.8 | Show/hide |
Query: ASSLLRVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR-----------
AS LLRVGVSY DSSIRQLHVL++WEDGSMEYPL++LVKYQA PLMIY+STK EESFLAALQRSDG+SEAPTVKLVKSSI SYEQAWHR
Subjt: ASSLLRVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR-----------
Query: ------------------------------------------------------------------------------------------------FSVF
FSVF
Subjt: ------------------------------------------------------------------------------------------------FSVF
Query: GMMNK------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGIS
GMMNK I+ F+SS+ELMHSLR+TLK VKDIPHILKKFNSPSSTYSSGDWT+FLKS CSLLHVNKIFEVG+S
Subjt: GMMNK------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGIS
Query: ENLGDNMQYLNLDIVEKANSCISTELAYVYELVI
ENL DNM++LNLDIVEKANSCI+TELAYVYELVI
Subjt: ENLGDNMQYLNLDIVEKANSCISTELAYVYELVI
|
|
| A0A6J1L5Q4 DNA mismatch repair protein MSH5 isoform X2 | 3.8e-73 | 51.8 | Show/hide |
Query: ASSLLRVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR-----------
AS LLRVGVSY DSSIRQLHVL++WEDGSMEYPL++LVKYQA PLMIY+STK EESFLAALQRSDG+SEAPTVKLVKSSI SYEQAWHR
Subjt: ASSLLRVGVSYDDSSIRQLHVLEIWEDGSMEYPLIELVKYQANPLMIYSSTKCEESFLAALQRSDGMSEAPTVKLVKSSILSYEQAWHR-----------
Query: ------------------------------------------------------------------------------------------------FSVF
FSVF
Subjt: ------------------------------------------------------------------------------------------------FSVF
Query: GMMNK------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGIS
GMMNK I+ F+SS+ELMHSLR+TLK VKDIPHILKKFNSPSSTYSSGDWT+FLKS CSLLHVNKIFEVG+S
Subjt: GMMNK------------------------------ISVFLSSDELMHSLRKTLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSACSLLHVNKIFEVGIS
Query: ENLGDNMQYLNLDIVEKANSCISTELAYVYELVI
ENL DNM++LNLDIVEKANSCI+TELAYVYELVI
Subjt: ENLGDNMQYLNLDIVEKANSCISTELAYVYELVI
|
|
