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Lag0018385 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018385
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlutamyl-tRNA synthetase
Genome locationchr5:25436691..25437490
RNA-Seq ExpressionLag0018385
SyntenyLag0018385
Gene Ontology termsGO:0006424 - glutamyl-tRNA aminoacylation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0017102 - methionyl glutamyl tRNA synthetase complex (cellular component)
GO:0004818 - glutamate-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR011035 - Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
IPR020056 - Ribosomal protein L25/Gln-tRNA synthetase, N-terminal
IPR020059 - Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050978.1 glutamate--tRNA ligase [Cucumis melo var. makuwa]2.5e-2595Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LEEGEDFLDVLNPCTKKET+ VGDSNMQN+KRGDILQLERKGYFRCDVPYVRPSKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

XP_008450490.1 PREDICTED: glutamate--tRNA ligase, cytoplasmic [Cucumis melo]7.2e-2593.33Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LEEGEDFLDVLNPCTKKET+ VGDSNM+N+KRGDILQLERKGYFRCDVPYVRPSKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

XP_022157609.1 glutamate--tRNA ligase, cytoplasmic [Momordica charantia]9.4e-2595Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LEEGEDFLDVLNPCTKKE+V VGDSNM+NLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

XP_023521072.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo]2.7e-2494.92Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVL
        LEEGEDFLDVLNPCTKKETV VGDSNM+N+KRGDILQLERKGYFRCDVPYVRPSKPIVL
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVL

XP_038895456.1 glutamate--tRNA ligase, cytoplasmic-like [Benincasa hispida]7.2e-2593.33Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LEEGEDFLDVLNPCTKKET+ VGDSNM+N+KRGDILQLERKGYFRCDVPYVRPSKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

TrEMBL top hitse value%identityAlignment
A0A1S3BPD2 Glutamyl-tRNA synthetase3.5e-2593.33Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LEEGEDFLDVLNPCTKKET+ VGDSNM+N+KRGDILQLERKGYFRCDVPYVRPSKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

A0A5A7U6S0 Glutamyl-tRNA synthetase1.2e-2595Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LEEGEDFLDVLNPCTKKET+ VGDSNMQN+KRGDILQLERKGYFRCDVPYVRPSKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

A0A6J1DWY8 Glutamyl-tRNA synthetase4.6e-2595Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LEEGEDFLDVLNPCTKKE+V VGDSNM+NLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

A0A6J1HA76 Glutamyl-tRNA synthetase1.7e-2493.22Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVL
        LEEGEDFLDVLNPCTKKET+ VGDSNM+N+KRGDILQLERKGYFRCDVPYVRPSKPIVL
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVL

A0A6J1HZT5 Glutamyl-tRNA synthetase2.3e-2491.67Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        L+EGEDFLD LNPCTKKETV +GDSNM+NLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

SwissProt top hitse value%identityAlignment
O13775 Probable glutamate--tRNA ligase, cytoplasmic3.7e-0852Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPY
        LEEGE++ D L P T+  + V  D  ++NLK+GDI+Q+ERKGY+  DVP+
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPY

O82462 Glutamate--tRNA ligase, cytoplasmic1.1e-1868.33Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LE+ ++  D +NP TKKET+ +GDSNM+NLK GD++QLERKGYFRCDVP+V+ SKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

P28668 Bifunctional glutamate/proline--tRNA ligase3.2e-0740.91Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPS------KPIVLF
        L + EDF   +   T+ E  ++GD  ++  K+GDI+QL+R+G+F+ DV Y  PS       PIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPS------KPIVLF

P46655 Glutamate--tRNA ligase, cytoplasmic2.4e-0746.67Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LEE E F D L P T+  T  + D N++++K GDI+Q ERKGY+R D    +  KP V F
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF

Q7SIA2 Bifunctional glutamate/proline--tRNA ligase3.2e-0741.1Show/hide
Query:  ETSGAGESKAINLTYG-------LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPY
        ET+ A    AI +TY        L + EDF   +N  +K E +++GD  +++LK+GDI+QL+R+G+F CD PY
Subjt:  ETSGAGESKAINLTYG-------LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPY

Arabidopsis top hitse value%identityAlignment
AT5G26710.1 Glutamyl/glutaminyl-tRNA synthetase, class Ic7.5e-2068.33Show/hide
Query:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF
        LE+ ++  D +NP TKKET+ +GDSNM+NLK GD++QLERKGYFRCDVP+V+ SKPIVLF
Subjt:  LEEGEDFLDVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCATCAATTTCCCATAAAATTTTTGGATCCTCTAATCAGCGTCCATGGTGTGGTCGTTCGGTTCCGTCGCCCAATTCATCTTTCCTTTTTGTCGCCCAATTTTG
GATCCATTGTTATTCTGCTTTGGCGTGGCGTGGCTGTTCGGATTCGTTGAAGTTGTGGGTTGGGTGCCGGAAATTACAGTTGCGATTGAAAAGTCCCCATAGCCTGGGAA
ATGAGCCGAGTCTGAAGGCCACTAGAGGTCTGGAAGAAGAAACGTCTGGTGCGGGTGAAAGTAAAGCCATTAATCTCACTTATGGACTCGAAGAAGGAGAGGATTTTCTT
GATGTATTAAATCCATGCACAAAAAAGGAAACCGTTGTTGTTGGGGATTCAAACATGCAAAATCTAAAGCGTGGAGACATATTGCAGTTGGAGAGGAAGGGGTACTTCAG
ATGCGATGTTCCATATGTCAGGCCATCGAAACCAATAGTACTATTTGAAGGATTTGGAATTCCCCAATTCCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCATCAATTTCCCATAAAATTTTTGGATCCTCTAATCAGCGTCCATGGTGTGGTCGTTCGGTTCCGTCGCCCAATTCATCTTTCCTTTTTGTCGCCCAATTTTG
GATCCATTGTTATTCTGCTTTGGCGTGGCGTGGCTGTTCGGATTCGTTGAAGTTGTGGGTTGGGTGCCGGAAATTACAGTTGCGATTGAAAAGTCCCCATAGCCTGGGAA
ATGAGCCGAGTCTGAAGGCCACTAGAGGTCTGGAAGAAGAAACGTCTGGTGCGGGTGAAAGTAAAGCCATTAATCTCACTTATGGACTCGAAGAAGGAGAGGATTTTCTT
GATGTATTAAATCCATGCACAAAAAAGGAAACCGTTGTTGTTGGGGATTCAAACATGCAAAATCTAAAGCGTGGAGACATATTGCAGTTGGAGAGGAAGGGGTACTTCAG
ATGCGATGTTCCATATGTCAGGCCATCGAAACCAATAGTACTATTTGAAGGATTTGGAATTCCCCAATTCCGTTAA
Protein sequenceShow/hide protein sequence
MSSSISHKIFGSSNQRPWCGRSVPSPNSSFLFVAQFWIHCYSALAWRGCSDSLKLWVGCRKLQLRLKSPHSLGNEPSLKATRGLEEETSGAGESKAINLTYGLEEGEDFL
DVLNPCTKKETVVVGDSNMQNLKRGDILQLERKGYFRCDVPYVRPSKPIVLFEGFGIPQFR