; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018395 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018395
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr5:25736963..25738793
RNA-Seq ExpressionLag0018395
SyntenyLag0018395
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]7.7e-1855.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC MST  R  AF+RLS+ST KK   S S FDRLK+TNDQ QR++ + K K F E + D K+ S VPS MKRK SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-1755.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC  ST  R  AF+RLS+ST KK   S S FDRLK+TNDQ QR++ +LK K F E + D K+ S VPS MKRK SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]1.3e-1755.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC  ST  R  AF+RLS+ST KK   S S FDRLK+TNDQ QR++ +LK K F E + D K+ S VPS MKRK SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

KAA0062458.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.9e-1855.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC  S STR  AF+RLS+ST KK   S S+F+RLK+TNDQ QR+  +LK K F E + D K+ S VPSHMKR  SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

TYK27425.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.9e-1855.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC  S STR  AF+RLS+ST KK   S S+F+RLK+TNDQ QR+  +LK K F E + D K+ S VPSHMKR  SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

TrEMBL top hitse value%identityAlignment
A0A5A7SZJ7 Retrotransposon gag protein3.7e-1855.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC MST  R  AF+RLS+ST KK   S S FDRLK+TNDQ QR++ + K K F E + D K+ S VPS MKRK SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

A0A5A7TQ06 Retrotransposon gag protein6.4e-1855.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC  ST  R  AF+RLS+ST KK   S S FDRLK+TNDQ QR++ +LK K F E + D K+ S VPS MKRK SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

A0A5A7V4E9 Retrotransposon gag protein2.9e-1855.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC  S STR  AF+RLS+ST KK   S S+F+RLK+TNDQ QR+  +LK K F E + D K+ S VPSHMKR  SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

A0A5D3BBF9 Gag protease polyprotein6.4e-1855.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC  ST  R  AF+RLS+ST KK   S S FDRLK+TNDQ QR++ +LK K F E + D K+ S VPS MKRK SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

A0A5D3DVW2 Retrotransposon gag protein2.9e-1855.88Show/hide
Query:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY
        +SM   EEENQC  S STR  AF+RLS+ST KK   S S+F+RLK+TNDQ QR+  +LK K F E + D K+ S VPSHMKR  SV INTEGSL  +  +
Subjt:  MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSY

Query:  AV
         +
Subjt:  AV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGACCGCAACAGAAGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTTAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAAGAAAAGTGGATCTTC
AATATCTATCTTTGATCGCCTCAAAGTAACAAACGATCAACCTCAAAGAAAGATAAATAACTTAAAGGTGAAACTATTCGATGAAGCAAGCAGTGACAAGAAGCTTCAAA
GTATTGTCCCGTCACATATGAAAAGAAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTTCGAAGGTTCTTACGCGGTTCGCTGCAGTTTCTTCTCTCCAAGT
TCGAAGGTTCTCGCTGCTACGTTGCTTGTTCCTTCTCTCCAACTTCGAAGGTTCTCACGCTGCTTTGCTGCAGTTCCTTCTCTCGAAGTTCGAAGGTTCTCACGTTACTT
CGCTGCAGTTCCTTCTCCAAGTTTGAAGGTTCTCACGTTGCTTCGCTCCAGTTCCTTCTCCTCCAAGTTCGAAGGTTCTCACGCTGCTTCATTGCAGTTCCTTCTCCAAG
TTCGAATGTTTTCACGTTGCTTTGCTACAGTTTCTTCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTTTTTCCAAGTTCGAAGGTTCTCATGTTGC
TTCGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCTGCTTCGCTGCAATTCCTTCTCCAAATTTGAATGTTCTCACGTTGCTTCACTGCAGTTTCTTCTCTCC
AAGTTCGAAGGTTCTCACGCTGCTTTGCTGCAGTTTCTTCTCCAAGTTCGAAGGTTCTCACAATGCTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCTAC
TTCGTTGCAGTTTCTTCTCTCCAAGTTCGAAGGTTCTCATATTGCTTCGCTGCAGTTCCTTCTCTCCAAATTCGAAGGTTCTAACGCTGCTTCGCTGTAGTTCCTTCTCT
CCAAGTTCAAAGGTTCTCACGCTGCTTCGCTGCATCTCTCCAAGTTCGAAGGTTCTCACGCTGCTTCGCTGCAGTTCCTTCTCCAAGTTCGAAGGTTCTCACGTTGCTTC
GTTGCAGTGCCTTCTCCAAGTTCGAAGGTTCTCACGCTACTTCGTTGTAGTTCATTCTCTCCAAGTTCGAAGGTTCTCACGCTACTTCGTTGTAGTTCCTTCTCTCCAAG
TTCGAAGGTTCTCACGTTTCTTCGCTGCAGTTCCTTCTCCAAGTTCTACAAGTTCGAAGGTTCTCACACTGCTTCATTGCGTGTTCCTTCTCTCCAAGTTCGAAGGTTCT
CACACTGCTTCCTTCTCTCCAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGACCGCAACAGAAGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTTAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAAGAAAAGTGGATCTTC
AATATCTATCTTTGATCGCCTCAAAGTAACAAACGATCAACCTCAAAGAAAGATAAATAACTTAAAGGTGAAACTATTCGATGAAGCAAGCAGTGACAAGAAGCTTCAAA
GTATTGTCCCGTCACATATGAAAAGAAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTTCGAAGGTTCTTACGCGGTTCGCTGCAGTTTCTTCTCTCCAAGT
TCGAAGGTTCTCGCTGCTACGTTGCTTGTTCCTTCTCTCCAACTTCGAAGGTTCTCACGCTGCTTTGCTGCAGTTCCTTCTCTCGAAGTTCGAAGGTTCTCACGTTACTT
CGCTGCAGTTCCTTCTCCAAGTTTGAAGGTTCTCACGTTGCTTCGCTCCAGTTCCTTCTCCTCCAAGTTCGAAGGTTCTCACGCTGCTTCATTGCAGTTCCTTCTCCAAG
TTCGAATGTTTTCACGTTGCTTTGCTACAGTTTCTTCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTTTTTCCAAGTTCGAAGGTTCTCATGTTGC
TTCGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCTGCTTCGCTGCAATTCCTTCTCCAAATTTGAATGTTCTCACGTTGCTTCACTGCAGTTTCTTCTCTCC
AAGTTCGAAGGTTCTCACGCTGCTTTGCTGCAGTTTCTTCTCCAAGTTCGAAGGTTCTCACAATGCTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCTAC
TTCGTTGCAGTTTCTTCTCTCCAAGTTCGAAGGTTCTCATATTGCTTCGCTGCAGTTCCTTCTCTCCAAATTCGAAGGTTCTAACGCTGCTTCGCTGTAGTTCCTTCTCT
CCAAGTTCAAAGGTTCTCACGCTGCTTCGCTGCATCTCTCCAAGTTCGAAGGTTCTCACGCTGCTTCGCTGCAGTTCCTTCTCCAAGTTCGAAGGTTCTCACGTTGCTTC
GTTGCAGTGCCTTCTCCAAGTTCGAAGGTTCTCACGCTACTTCGTTGTAGTTCATTCTCTCCAAGTTCGAAGGTTCTCACGCTACTTCGTTGTAGTTCCTTCTCTCCAAG
TTCGAAGGTTCTCACGTTTCTTCGCTGCAGTTCCTTCTCCAAGTTCTACAAGTTCGAAGGTTCTCACACTGCTTCATTGCGTGTTCCTTCTCTCCAAGTTCGAAGGTTCT
CACACTGCTTCCTTCTCTCCAAGTTGA
Protein sequenceShow/hide protein sequence
MSMTATEEENQCSMSTSTRPLAFQRLSVSTLKKSGSSISIFDRLKVTNDQPQRKINNLKVKLFDEASSDKKLQSIVPSHMKRKFSVLINTEGSLKFEGSYAVRCSFFSPS
SKVLAATLLVPSLQLRRFSRCFAAVPSLEVRRFSRYFAAVPSPSLKVLTLLRSSSFSSKFEGSHAASLQFLLQVRMFSRCFATVSSLQVRRFSRCFAAVPFFQVRRFSCC
FAAVPSLQVQRFSRCFAAIPSPNLNVLTLLHCSFFSPSSKVLTLLCCSFFSKFEGSHNASLQFLPPSSKVLTLLRCSFFSPSSKVLILLRCSSFSPNSKVLTLLRCSSFS
PSSKVLTLLRCISPSSKVLTLLRCSSFSKFEGSHVASLQCLLQVRRFSRYFVVVHSLQVRRFSRYFVVVPSLQVRRFSRFFAAVPSPSSTSSKVLTLLHCVFLLSKFEGS
HTASFSPS