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Lag0018401 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018401
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr5:25958794..25959159
RNA-Seq ExpressionLag0018401
SyntenyLag0018401
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]1.8e-2549.15Show/hide
Query:  ILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSP
        IL++  E++R H V+PI R+EF+V DG    R N++++TCTC +F YYE  CSHAI     R+I  HTLCS  Y +D+LI AY +P+ PLG E +W    
Subjt:  ILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSP

Query:  QFVDVEVLPPRRVPRVGR
         +V   + PPR VPRVGR
Subjt:  QFVDVEVLPPRRVPRVGR

XP_022156122.1 uncharacterized protein LOC111023087 [Momordica charantia]3.5e-2649.17Show/hide
Query:  EILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRS
        E++ KA + +R+H+V  I ++ F+V DG+L G  +L ++TCTC EF+Y++ SCS AI A + R I+ +TLC  VY V+S + AYA+PI P+G  S WK S
Subjt:  EILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRS

Query:  PQFVDVEVLPPRRVPRVGRR
        P FV+++V PP++V RVGRR
Subjt:  PQFVDVEVLPPRRVPRVGRR

XP_038890792.1 uncharacterized protein LOC120080248 [Benincasa hispida]3.5e-3460.68Show/hide
Query:  MEILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKR
        M I+  A  K+ KH V+PI ++EF+V DG LGGR N+HARTCTC +F+YYE SCSHAI AC  R+ID  + CS VY +D+++ AYA+PI+PLGH  EWK+
Subjt:  MEILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKR

Query:  SPQFVDVEVLPPRRVPR
        S  FVDVE LPP+RVPR
Subjt:  SPQFVDVEVLPPRRVPR

XP_038895917.1 uncharacterized protein LOC120084090 [Benincasa hispida]5.8e-2952.5Show/hide
Query:  MEILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKR
        M I   A +K+ +H V+PI ++EF++ DG L GRAN+H R CTC +F+YYE  CSH I AC  ++ID  +LCS VY ++S++ AYA+PI+  GH S WK+
Subjt:  MEILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKR

Query:  SPQFVDVEVLPPRRVPRVGR
        S  F++VE LPP+RVPR+GR
Subjt:  SPQFVDVEVLPPRRVPRVGR

XP_038904373.1 uncharacterized protein LOC120090731 [Benincasa hispida]4.0e-3053.33Show/hide
Query:  MEILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKR
        M I+  A +K+ ++ V+PI +YEF+V +G L GR N+H RTCTC +F+YY+  CSHAI AC  ++ID  +LCS VY +D+++ AYA+P++ LGH  EWK+
Subjt:  MEILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKR

Query:  SPQFVDVEVLPPRRVPRVGR
        S  FVDVE LPP+RV R+GR
Subjt:  SPQFVDVEVLPPRRVPRVGR

TrEMBL top hitse value%identityAlignment
A0A6J1DLB0 uncharacterized protein LOC1110219698.5e-2649.15Show/hide
Query:  ILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSP
        IL++  E++R H V+PI R+EF+V DG    R N++++TCTC +F YYE  CSHAI     R+I  HTLCS  Y +D+LI AY +P+ PLG E +W    
Subjt:  ILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSP

Query:  QFVDVEVLPPRRVPRVGR
         +V   + PPR VPRVGR
Subjt:  QFVDVEVLPPRRVPRVGR

A0A6J1DN02 uncharacterized protein LOC1110220677.2e-2546.22Show/hide
Query:  ILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSP
        ++    + +R+H+V  I ++ F+V DG+L G  +  ++TCTC EF+Y++ SCSHAI A + R I+ +TLC   Y V+S + AYA+PI P+G  S WK SP
Subjt:  ILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSP

Query:  QFVDVEVLPPRRVPRVGRR
         FV+++V PP++V RVGRR
Subjt:  QFVDVEVLPPRRVPRVGRR

A0A6J1DNT3 protein FAR1-RELATED SEQUENCE 4-like8.5e-2647.5Show/hide
Query:  EILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRS
        E++ +A + +R+H+V  I ++ F+V DG+L G  +L ++TCTC EF+Y++  CSHAI A   R I+ +TLC   Y V+S + AYA+PI P+G  S WK S
Subjt:  EILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRS

Query:  PQFVDVEVLPPRRVPRVGRR
        P FV+++V PP++V RVGRR
Subjt:  PQFVDVEVLPPRRVPRVGRR

A0A6J1DQV1 uncharacterized protein LOC1110222995.5e-2543.7Show/hide
Query:  ILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSP
        I++ A E++R+H ++PI  YE++V DG+   R NL++++CTC +F+YY+  CSHA+ A  +R++  +TLCS  Y +++L++ YA+PI PLG E +W    
Subjt:  ILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSP

Query:  QFVDVEVLPPRRVPRVGRR
         FV+  + PP+ V RVGRR
Subjt:  QFVDVEVLPPRRVPRVGRR

A0A6J1DR67 uncharacterized protein LOC1110230871.7e-2649.17Show/hide
Query:  EILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRS
        E++ KA + +R+H+V  I ++ F+V DG+L G  +L ++TCTC EF+Y++ SCS AI A + R I+ +TLC  VY V+S + AYA+PI P+G  S WK S
Subjt:  EILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRS

Query:  PQFVDVEVLPPRRVPRVGRR
        P FV+++V PP++V RVGRR
Subjt:  PQFVDVEVLPPRRVPRVGRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTTTGGAAAAAGCAGAGGAGAAGTCACGGAAGCACGTGGTCAAACCTATTGCTCGATATGAGTTTGATGTCGATGACGGACATTTGGGTGGACGCGCCAACCT
TCACGCTAGAACATGCACCTGTCATGAATTTGAGTATTACGAACCTTCATGCTCCCATGCGATCACTGCATGCACTTATCGACATATAGACTATCATACACTTTGTTCTA
GAGTCTACCATGTGGACTCTTTGATAGATGCATATGCACAACCCATACAACCCCTTGGGCATGAGTCGGAGTGGAAGAGGTCACCTCAATTCGTCGATGTGGAAGTCTTG
CCTCCTCGAAGAGTGCCTAGAGTTGGTCGTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTTTGGAAAAAGCAGAGGAGAAGTCACGGAAGCACGTGGTCAAACCTATTGCTCGATATGAGTTTGATGTCGATGACGGACATTTGGGTGGACGCGCCAACCT
TCACGCTAGAACATGCACCTGTCATGAATTTGAGTATTACGAACCTTCATGCTCCCATGCGATCACTGCATGCACTTATCGACATATAGACTATCATACACTTTGTTCTA
GAGTCTACCATGTGGACTCTTTGATAGATGCATATGCACAACCCATACAACCCCTTGGGCATGAGTCGGAGTGGAAGAGGTCACCTCAATTCGTCGATGTGGAAGTCTTG
CCTCCTCGAAGAGTGCCTAGAGTTGGTCGTCGTTAG
Protein sequenceShow/hide protein sequence
MEILEKAEEKSRKHVVKPIARYEFDVDDGHLGGRANLHARTCTCHEFEYYEPSCSHAITACTYRHIDYHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVL
PPRRVPRVGRR