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Lag0018403 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018403
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr5:25982531..25987183
RNA-Seq ExpressionLag0018403
SyntenyLag0018403
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050103.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-2384.06Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGSVFTLN  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]3.7e-2382.61Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +RYQSNPGLDHWT VK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGSVFTLN  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
KAA0062926.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-2384.06Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGSVFTLN  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
TYK16417.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-2384.06Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGSVFTLN  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
TYK25899.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-2383.08Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLN
        +RYQSNPG DHWTVVKNI+KYLRRT+DY LVYG KDLILTEYTD DFQTDKD++K TSGS+FTLN
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLN
TrEMBL top hitse value%identityAlignment
A0A5A7U2H0 Gag/pol protein1.0e-2384.06Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGSVFTLN  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
A0A5A7V1F5 Gag/pol protein1.8e-2382.61Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +RYQSNPGLDHWT VK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGSVFTLN  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
A0A5A7V901 Gag/pol protein6.1e-2484.06Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGSVFTLN  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
A0A5D3CWZ1 Gag/pol protein6.1e-2484.06Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +RYQSNPGLDHWTVVK I+KYLRRTRDY LVYGAKDLILT YTD DFQTDKDS+K TSGSVFTLN  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
A0A5D3DRC2 Gag/pol protein1.4e-2383.08Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLN
        +RYQSNPG DHWTVVKNI+KYLRRT+DY LVYG KDLILTEYTD DFQTDKD++K TSGS+FTLN
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLN
SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1613.0e-0434.85Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVY-GAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLN
        +++ S+P   HW  +K +++YL+ T+ Y L +  A    L  Y+D D+  D +S++ TSG +F LN
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVY-GAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLN
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-0842.03Show/hide
Query:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
        +R+  NPG +HW  VK I++YLR T    L +G  D IL  YTD D   D D++K ++G +FT +  A+
Subjt:  NRYQSNPGLDHWTVVKNIIKYLRRTRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDAL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGGTATTTATACCCCTCTTCGTCGCTGAAGAAGGGACTCCGAATTCTATCCCTAAACACTATTCGATATTTTCTACTCTCTCCTCTTGCTCTTACTTTTCCACT
CCCTACCGTTCTATTTGCTGACTTAAGCATCGGAGCTGGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTTATCTACAAATT
TACCGTTGGTGGCACGTGAAGGTCAAGGCCAAAAAGCCAACAGATACCAATCTAATCCAGGGTTAGACCACTGGACTGTAGTGAAAAACATCATCAAGTATCTTCGGAGA
ACGAGGGACTATCAGCTTGTGTATGGCGCTAAGGATTTGATCCTTACAGAATACACAGACTGTGACTTTCAGACTGATAAGGATTCTAAGAAACCTACATCAGGATCAGT
GTTTACCCTCAATGTGGATGCCCTAAAGGATAGTATGCTACCGCCTACATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGT
CTAGAGAATTCAGAAGATCCAAGATTCAAAATTCAACCAACTCAAGACTCAGAAGGTCAAGAAACAACCTTGCAGGGGCATATACTAGTGACAAGTTTATTGTTAAGTAT
AACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTATCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGATTGAGATGCAAGAGCACATCAACAACTTGATGAA
GGCGATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGGTATTTATACCCCTCTTCGTCGCTGAAGAAGGGACTCCGAATTCTATCCCTAAACACTATTCGATATTTTCTACTCTCTCCTCTTGCTCTTACTTTTCCACT
CCCTACCGTTCTATTTGCTGACTTAAGCATCGGAGCTGGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTTATCTACAAATT
TACCGTTGGTGGCACGTGAAGGTCAAGGCCAAAAAGCCAACAGATACCAATCTAATCCAGGGTTAGACCACTGGACTGTAGTGAAAAACATCATCAAGTATCTTCGGAGA
ACGAGGGACTATCAGCTTGTGTATGGCGCTAAGGATTTGATCCTTACAGAATACACAGACTGTGACTTTCAGACTGATAAGGATTCTAAGAAACCTACATCAGGATCAGT
GTTTACCCTCAATGTGGATGCCCTAAAGGATAGTATGCTACCGCCTACATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGT
CTAGAGAATTCAGAAGATCCAAGATTCAAAATTCAACCAACTCAAGACTCAGAAGGTCAAGAAACAACCTTGCAGGGGCATATACTAGTGACAAGTTTATTGTTAAGTAT
AACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTATCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGATTGAGATGCAAGAGCACATCAACAACTTGATGAA
GGCGATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGTGCTAA
Protein sequenceShow/hide protein sequence
MNRYLYPSSSLKKGLRILSLNTIRYFLLSPLALTFPLPTVLFADLSIGAGVASTTPVCRFTVLQATSSPLSTNLPLVAREGQGQKANRYQSNPGLDHWTVVKNIIKYLRR
TRDYQLVYGAKDLILTEYTDCDFQTDKDSKKPTSGSVFTLNVDALKDSMLPPTSENSESREFCQSPESSEVRESREFRRSKIQNSTNSRLRRSRNNLAGAYTSDKFIVKY
NPLFEPDSDVVTIMMTETRTMEERMIEMQEHINNLMKAIEEKDSQIAQLKC