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Lag0018406 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018406
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr5:25996843..25997220
RNA-Seq ExpressionLag0018406
SyntenyLag0018406
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]4.8e-1838.76Show/hide
Query:  FNSLDMTPTIEEYQELLRMPI-------TFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        FN+ D+TPTIEEYQ L+ +P+        + +K   ++S  K ++G+I   E+  Q+K K G   + + YLINL +     +  L+L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMPI-------TFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
        ++GYV  +V K+F+ IE G++P++PI+AE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.6e-1842.64Show/hide
Query:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        F S D+ PTIEEYQ +L MP         F  K   K++  K ++  +   EI   +K K G E V   YLI + Q + D++  L L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
          GYV  KV KLF Q+E G++PI+PILAE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]8.2e-1841.86Show/hide
Query:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        F S ++ PTIEEYQ +L MP         F  K   K++  K ++  +   EI   +K K G E V   YLI + Q + D++  L L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
          GYV  KV KLF Q+E G++PI+PILAE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]1.6e-1842.64Show/hide
Query:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        F S D+ PTIEEYQ +L MP         F  K   K++  K ++  +   EI   +K K G E V   YLI + Q + D++  L L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
          GYV  KV KLF Q+E G++PI+PILAE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]3.7e-1841.86Show/hide
Query:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        F S D+ PTIEEYQ +L MP         F  K   K++  K ++  +   EI   +K K G E V   YLI + Q + D++  L L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
          GYV  KV KLF ++E G++PI+PILAE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase2.3e-1838.76Show/hide
Query:  FNSLDMTPTIEEYQELLRMPI-------TFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        FN+ D+TPTIEEYQ L+ +P+        + +K   ++S  K ++G+I   E+  Q+K K G   + + YLINL +     +  L+L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMPI-------TFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
        ++GYV  +V K+F+ IE G++P++PI+AE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

A0A5A7T1W2 Retrotrans_gag domain-containing protein8.0e-1942.64Show/hide
Query:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        F S D+ PTIEEYQ +L MP         F  K   K++  K ++  +   EI   +K K G E V   YLI + Q + D++  L L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
          GYV  KV KLF Q+E G++PI+PILAE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

A0A5A7T5S7 Girdin-like4.0e-1841.86Show/hide
Query:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        F S ++ PTIEEYQ +L MP         F  K   K++  K ++  +   EI   +K K G E V   YLI + Q + D++  L L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
          GYV  KV KLF Q+E G++PI+PILAE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

A0A5A7T6E2 Girdin-like8.0e-1942.64Show/hide
Query:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        F S D+ PTIEEYQ +L MP         F  K   K++  K ++  +   EI   +K K G E V   YLI + Q + D++  L L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
          GYV  KV KLF Q+E G++PI+PILAE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

A0A5A7UWQ6 Uncharacterized protein1.8e-1841.86Show/hide
Query:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN
        F S D+ PTIEEYQ +L MP         F  K   K++  K ++  +   EI   +K K G E V   YLI + Q + D++  L L ALC++G+++FP 
Subjt:  FNSLDMTPTIEEYQELLRMP-------ITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPN

Query:  LRGYVVVKVAKLFLQIEYGISPILPILAE
          GYV  KV KLF ++E G++PI+PILAE
Subjt:  LRGYVVVKVAKLFLQIEYGISPILPILAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATTCCCTCGACATGACGCCTACCATTGAAGAATACCAGGAGTTGCTTCGAATGCCAATAACGTTTCGACAAAAGAATGACTGGAAGAAGAGCTTTTGCAAGAA
TTATATCGGTAATATAACTGTTGTTGAAATAGGACATCAACTCAAGAATAAGAGAGGAAGTGAAGAAGTATCCTTAGGTTACCTCATAAACCTTCTTCAACAGCATAAAG
ATGATGAGTTAAGCTTGAATCTCTTTGCACTATGTATGTTTGGGTCAATCGTGTTCCCAAATCTCCGAGGATACGTAGTTGTGAAGGTTGCCAAGTTATTCCTTCAAATC
GAATATGGCATTAGTCCAATTTTACCCATCCTTGCAGAAATAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATTCCCTCGACATGACGCCTACCATTGAAGAATACCAGGAGTTGCTTCGAATGCCAATAACGTTTCGACAAAAGAATGACTGGAAGAAGAGCTTTTGCAAGAA
TTATATCGGTAATATAACTGTTGTTGAAATAGGACATCAACTCAAGAATAAGAGAGGAAGTGAAGAAGTATCCTTAGGTTACCTCATAAACCTTCTTCAACAGCATAAAG
ATGATGAGTTAAGCTTGAATCTCTTTGCACTATGTATGTTTGGGTCAATCGTGTTCCCAAATCTCCGAGGATACGTAGTTGTGAAGGTTGCCAAGTTATTCCTTCAAATC
GAATATGGCATTAGTCCAATTTTACCCATCCTTGCAGAAATAATATGA
Protein sequenceShow/hide protein sequence
MFNSLDMTPTIEEYQELLRMPITFRQKNDWKKSFCKNYIGNITVVEIGHQLKNKRGSEEVSLGYLINLLQQHKDDELSLNLFALCMFGSIVFPNLRGYVVVKVAKLFLQI
EYGISPILPILAEII