; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018410 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018410
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr5:26248149..26249462
RNA-Seq ExpressionLag0018410
SyntenyLag0018410
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2906274.1 hypothetical protein DAI22_12g007450 [Oryza sativa Japonica Group]1.1e-5029.35Show/hide
Query:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISP-SGDWNLQKLDFAVLSSYIHLIRKIPINQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKID----GIS
        ++ED W+P  +  K      +   A V E I P +  W    L        +  I +IPI    +D + W ++++G+++VKS Y+     K       + 
Subjt:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISP-SGDWNLQKLDFAVLSSYIHLIRKIPINQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKID----GIS

Query:  SSTSHMNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIW-----VNTFNKLPMKTDYNDCFLDR
        +ST+  +++WK +WNLKVP KIK F W+AL  ++P + IL  R + ++  CP+C N PE I H++F C+RAK++W      +   +L M        L+ 
Subjt:  SSTSHMNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIW-----VNTFNKLPMKTDYNDCFLDR

Query:  WMNINSACSNEELG---LVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSD
         +       + ++G   LV  A W IW +R +++H EA+    +    I      Y  A+ +   +  G            W  PP      NVDA + +
Subjt:  WMNINSACSNEELG---LVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSD

Query:  SLPETGIGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYA
              +G V R  +G ++ A+  F+   +DAP AE  A+ EG+ +A+ +GC R+II+SDC   V  +     T      + E    L   F DI  ++ 
Subjt:  SLPETGIGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYA

Query:  QRDRNKVADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDLS
         R+ N+VA  LA+ AR  + N  WV  D  P ++L  + ND++
Subjt:  QRDRNKVADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDLS

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]5.0e-5431.8Show/hide
Query:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLL-EDKLVWHFDKTGSYTVKSGYNL--FIKSKIDGISSS
        ++ D W+P  + FK +       S  V +  + SG WN+  L        +    +IP+  L   D L+WH+++ G Y+VKSGY L    K K+ G  S 
Subjt:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLL-EDKLVWHFDKTGSYTVKSGYNL--FIKSKIDGISSS

Query:  TSHMN-KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINS
           +N K WK IW LK+P KIK F W+   + LP   IL  R I    +CP C  K ES+ H ++ C  AKE+W N+      +    + F + W  +  
Subjt:  TSHMN-KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINS

Query:  ACSNEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSN-RNWIPPPSDVWKFNVDAAWSDSLPETGIG
        + S EE GL A  CW +W+ RN  I E       +    + +   ++  A++    +H    R SSPQ+    W PPP+ ++K NVD A        G+G
Subjt:  ACSNEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSN-RNWIPPPSDVWKFNVDAAWSDSLPETGIG

Query:  VVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVA
        VV R +NG+ + A  + +  +  A   EL A +EG++ A  MG    ++E D Q  +N +    +   I   L+E +  L   F  +  Q+  R  NKVA
Subjt:  VVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVA

Query:  DRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL
          LA++A    CN      + +P WLL ++E D+
Subjt:  DRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]5.2e-5130.02Show/hide
Query:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPI-NQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTS
        +++D W+PR  TF+PI          V + I     W + +L+   +   I  I KI + +   ED+++WHFDK G Y+VKSGY L +         S++
Subjt:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPI-NQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTS

Query:  HMNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINSACS
          +++WK  W L +P K+K F W+AL N+LPT   L +R      +C  C  + E++ H+L  C  A++IW      +    D+N  F      + S  S
Subjt:  HMNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINSACS

Query:  NEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCR
          E  L+ V CW IWS RNK I E         +      L  Y +  S+   +H    R    Q    W PP  +V K NVDAA S    + G+G + R
Subjt:  NEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCR

Query:  GSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLA
         + GK++    K          AE  AI  G+++A  +    +I+ESDC+  V  LN    +   +  ++  +      F  ++F +  R  N  A  LA
Subjt:  GSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLA

Query:  KWARVRKCNNIWV
        K+A      ++WV
Subjt:  KWARVRKCNNIWV

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.8e-6533.63Show/hide
Query:  FEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQL-LEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSH
        F DPW+PR  TFKP+  NN      V  FI+  G+W++  +  +  +    LI  +PI+   L+D  +WH+DK G+Y+V+SGY L++  K +  S+ST++
Subjt:  FEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQL-LEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSH

Query:  MNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLP-MKTDYNDCFLDRWMNINSACS
            W SIW L VP KIK F W++ +  +PT   L  RGI     C IC ++ ESI H  F+C RA++IW   F  L  +  + N  FL+ W ++     
Subjt:  MNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLP-MKTDYNDCFLDRWMNINSACS

Query:  NEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEA-----SSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGI
         ++L L A+  W IW+DRN +IH + + PV  +  W+  +L  + +A     S R ++ H  V         + W P  S   K N DAA   +   T  
Subjt:  NEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEA-----SSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGI

Query:  GVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKV
        G + R S+  L+ A+   +   +    AE+R I+EG+K A +     + +ESD  +A+  +  +  T    +  V  I AL  CF  I F ++ R  N+ 
Subjt:  GVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKV

Query:  ADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL-SFFVHVA
        A  LAKW  +   +  +      P WLL LV+ D  S F HVA
Subjt:  ADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL-SFFVHVA

XP_030926547.1 uncharacterized protein LOC115953156 [Quercus lobata]2.3e-5130.3Show/hide
Query:  MFEDPWVPRENTFKPICVNNSY-RSAKVKEFISPSGD-WNLQKLDFAVLSSYIHLIRKIPINQLL-EDKLVWHFDKTGSYTVKSGYNL---FIKSKIDGI
        +++D W+P  +T+K I   N       V   I+P    WN+  +    L      I KIP+++ L + K++W  ++ G ++VKS Y++    + +   G 
Subjt:  MFEDPWVPRENTFKPICVNNSY-RSAKVKEFISPSGD-WNLQKLDFAVLSSYIHLIRKIPINQLL-EDKLVWHFDKTGSYTVKSGYNL---FIKSKIDGI

Query:  SSSTSHMNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTD-YNDCFLDRWMN
        SS+      +WK +W+L +P KIK F W+A  N LPT   + +RGI  N+ CP+C N  ES+DH L  C  +  +W + + + P+ T  + + FLD  + 
Subjt:  SSSTSHMNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTD-YNDCFLDRWMN

Query:  INSACSNEELGLVAVACWAIWSDRNKIIHEE-AIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPET
        I S  + ++L +     WAIWS+RN I+H++  + P++     +       +E  +   +    + R +S     +W PPP   +K NVD A S+    +
Subjt:  INSACSNEELGLVAVACWAIWSDRNKIIHEE-AIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPET

Query:  GIGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRN
         +GVV R SNG+++ A C  L     A  +E+ A+ +GV  A+ +   R+I+ESD    +  +N K+ T  I   L++ I  +   F+   F+Y  R  N
Subjt:  GIGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRN

Query:  KVADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDLSF
         VA  LA+ A  R+  N  +   V+P ++L  +++D+ F
Subjt:  KVADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDLSF

TrEMBL top hitse value%identityAlignment
A0A5E4FZN9 PREDICTED: retrotransposon2.4e-5431.8Show/hide
Query:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLL-EDKLVWHFDKTGSYTVKSGYNL--FIKSKIDGISSS
        ++ D W+P  + FK +       S  V +  + SG WN+  L        +    +IP+  L   D L+WH+++ G Y+VKSGY L    K K+ G  S 
Subjt:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLL-EDKLVWHFDKTGSYTVKSGYNL--FIKSKIDGISSS

Query:  TSHMN-KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINS
           +N K WK IW LK+P KIK F W+   + LP   IL  R I    +CP C  K ES+ H ++ C  AKE+W N+      +    + F + W  +  
Subjt:  TSHMN-KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINS

Query:  ACSNEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSN-RNWIPPPSDVWKFNVDAAWSDSLPETGIG
        + S EE GL A  CW +W+ RN  I E       +    + +   ++  A++    +H    R SSPQ+    W PPP+ ++K NVD A        G+G
Subjt:  ACSNEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSN-RNWIPPPSDVWKFNVDAAWSDSLPETGIG

Query:  VVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVA
        VV R +NG+ + A  + +  +  A   EL A +EG++ A  MG    ++E D Q  +N +    +   I   L+E +  L   F  +  Q+  R  NKVA
Subjt:  VVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVA

Query:  DRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL
          LA++A    CN      + +P WLL ++E D+
Subjt:  DRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL

A0A6J1DX30 uncharacterized protein LOC1110248742.3e-6533.63Show/hide
Query:  FEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQL-LEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSH
        F DPW+PR  TFKP+  NN      V  FI+  G+W++  +  +  +    LI  +PI+   L+D  +WH+DK G+Y+V+SGY L++  K +  S+ST++
Subjt:  FEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQL-LEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSH

Query:  MNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLP-MKTDYNDCFLDRWMNINSACS
            W SIW L VP KIK F W++ +  +PT   L  RGI     C IC ++ ESI H  F+C RA++IW   F  L  +  + N  FL+ W ++     
Subjt:  MNKIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLP-MKTDYNDCFLDRWMNINSACS

Query:  NEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEA-----SSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGI
         ++L L A+  W IW+DRN +IH + + PV  +  W+  +L  + +A     S R ++ H  V         + W P  S   K N DAA   +   T  
Subjt:  NEELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEA-----SSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGI

Query:  GVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKV
        G + R S+  L+ A+   +   +    AE+R I+EG+K A +     + +ESD  +A+  +  +  T    +  V  I AL  CF  I F ++ R  N+ 
Subjt:  GVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKV

Query:  ADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL-SFFVHVA
        A  LAKW  +   +  +      P WLL LV+ D  S F HVA
Subjt:  ADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL-SFFVHVA

A0A803NM27 Uncharacterized protein1.0e-4929.04Show/hide
Query:  DPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPI-NQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSHMN
        DPW+P  + F PI    +  +  V ++I+P  +WN+ KL+    S+ +  I  +P+ +    D  VWH    G Y VKSGY++      +   S +S   
Subjt:  DPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPI-NQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSHMN

Query:  KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINSACSNEE
          WKS W LK+PPK+K F WKA++N LP    L +R    +  C +C+N  ES+ H +F C  A+ +W         K   +    D    I+   +  E
Subjt:  KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINSACSNEE

Query:  LGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSN
        L ++    W+IWSDRN ++H +     +  S     +L+ +   S+++ ++HAG+    +P ++R W PPP ++ K NVDAA+ D+    G G + R S 
Subjt:  LGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSN

Query:  GKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAKWA
        G +  A    +D        E + +   +K A+ +  K  ++E+D  + VN L K +      + L+  +         +   +  RD N+ A  LAK A
Subjt:  GKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAKWA

Query:  RVRKCNNIWVEADVSPEWLLLLVENDL
         V      W+E D     L ++V++ L
Subjt:  RVRKCNNIWVEADVSPEWLLLLVENDL

A0A803QAH8 Uncharacterized protein2.1e-5029.27Show/hide
Query:  DPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPI-NQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSHMN
        DPW+P  + F PI    +  +  V ++I+P  +WN+ KL+    S+ +  I  +P+ +    D  VWH  + G Y VKSGY++      +   S +S   
Subjt:  DPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPI-NQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSHMN

Query:  KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINSACSNEE
          WKS W LK+PPK+K F WKA++N LP    L +R    +  C +C+N  ES+ H +F C  A+ +W         K   +    D    I+   +  E
Subjt:  KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINSACSNEE

Query:  LGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSN
        L ++    W+IWSDRN +IH +     +  S     +L+ +   S+ + ++HAG+    +P +++ W PPP    K NVDAA+ D+    G G + R S 
Subjt:  LGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSN

Query:  GKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAKWA
        GK+  A    +D        E + +   +K A+ +  K  ++E+D  + VN L K +      + L+  +         +   +  RD N+ A  LAK A
Subjt:  GKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAKWA

Query:  RVRKCNNIWVEADVSPEWLLLLVENDL
         V      W+E D     L ++V++ L
Subjt:  RVRKCNNIWVEADVSPEWLLLLVENDL

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)1.0e-4931.96Show/hide
Query:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLL-EDKLVWHFDKTGSYTVKSGYNL--FIKSKIDGISSS
        ++ D W+P  + FK +       S +V +  + SG WN+  L        +  I +IP+  L   D L+WH+++ G Y+VKSGY L    K K+ G  S+
Subjt:  MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLL-EDKLVWHFDKTGSYTVKSGYNL--FIKSKIDGISSS

Query:  TSHMN-KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINS
           +N K WK IW LK+P KIK F W+   + LP   IL  R I    +CP C  K ES+ H ++ C  AKE+W N+      +    + F + W  +  
Subjt:  TSHMN-KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINS

Query:  ACSNEELGLVAVACWAIWSDRNKII----HEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSN-RNWIPPPSDVWKFNVDAAWSDSLPE
        + S EE GL A  CW +W+ RN  I     E AI  +++ +   QE+       S     +H    R SSPQ+  + W PPP+            DS+  
Subjt:  ACSNEELGLVAVACWAIWSDRNKII----HEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSN-RNWIPPPSDVWKFNVDAAWSDSLPE

Query:  TGIGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDR
         G+GVV R +NG+ + A  + +  +  A   EL A +EG++ A  MG    I+E D Q  +N +    +   I   L+E +  L   F  +   +  R  
Subjt:  TGIGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDR

Query:  NKVADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL
        NKVA  LA++A    CN      + +P WLL ++E D+
Subjt:  NKVADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein4.0e-2524.77Show/hide
Query:  KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIW----VNTFNKLPMKTDYNDCFLDRWMNINSAC
        ++ ++IW L V PKIKHF W+ +   L T   L+ R ID + +C  C  + E+I HI+FNC   + +W    +   N+    + + D  L+R + ++   
Subjt:  KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIW----VNTFNKLPMKTDYNDCFLDRWMNINSAC

Query:  SNEELG--LVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRN---WIPPPSDVWKFNVDAAWSDSLPETG
        +   L   L     W +W  RN  + ++     +  +    +   +++ A+   E  +  V  +    S R+   W PPP    K N D+ ++   P T 
Subjt:  SNEELG--LVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRN---WIPPPSDVWKFNVDAAWSDSLPETG

Query:  IGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAI--WALGLCFDDIRFQYAQRDR
         G   R  NG ++      L  +  +  AE    +  +++  + G + V  ESD +  V  +N   +   ++  L+  I  W L L +  + F    R+R
Subjt:  IGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAI--WALGLCFDDIRFQYAQRDR

Query:  NKVADRLAKWARVRKCNNIWVEADVSPEWLL
        N  AD LA     R  + ++      P WL+
Subjt:  NKVADRLAKWARVRKCNNIWVEADVSPEWLL

AT3G09510.1 Ribonuclease H-like superfamily protein2.8e-3126.93Show/hide
Query:  ENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLLE-DKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSHMNKI--WK
        E T+K + +NN +       F      W+  K+   V  S    I +I + +  + DK++W+++ TG YTV+SGY L        I +       I    
Subjt:  ENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLLE-DKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSHMNKI--WK

Query:  SIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNI-----NSACSNE
         IWNL + PK+KHF W+AL+  L T   L  RG+  +  CP C  + ESI+H LF C  A   W  + + L      ++ F +   NI     ++  S+ 
Subjt:  SIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNI-----NSACSNE

Query:  ELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGS
           L     W IW  RN ++  +     +K     +     ++ A+   +      TR  + ++   W  PP+   K N DA +     E   G + R  
Subjt:  ELGLVAVACWAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGS

Query:  NGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVE-AIWALGLCFDDIRFQYAQRDRNKVADRLAK
         G  I      L    +   AE +A++  ++     G  +V +E DCQ  +N +N  S    +   L + + WA    F  I+F + +R  NK+A  LAK
Subjt:  NGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVE-AIWALGLCFDDIRFQYAQRDRNKVADRLAK

Query:  W
        +
Subjt:  W

AT3G25270.1 Ribonuclease H-like superfamily protein1.3e-2325.65Show/hide
Query:  KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIW-VNTFNKLPMKTDYNDCFLDRWMNINSACSNE
        +I   IW LK  PKIKHF WK L+  L T   LK+R I N+  C  C  + E+  H+ F+C  A+++W  +      ++T          + ++S  +N 
Subjt:  KIWKSIWNLKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIW-VNTFNKLPMKTDYNDCFLDRWMNINSACSNE

Query:  ELGLVAVA---CWAIWSDRNKIIHEEAI----PPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNR-NWIPPPSDVWKFNVDAAWSDSLPETG
        +  L  +A    W +W  RN+++ ++        + +    +QE+        S  + +H+  +R   P   R  W  PPS   K+N D A++       
Subjt:  ELGLVAVA---CWAIWSDRNKIIHEEAI----PPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNR-NWIPPPSDVWKFNVDAAWSDSLPETG

Query:  IGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEA-IWALGLCFDDIRFQYAQRDRN
         G + R  NG  + +         D+  +E +A++  ++ A S G ++VI E D +     +N +   +     + E   W     F++  F++  R  N
Subjt:  IGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEA-IWALGLCFDDIRFQYAQRDRN

Query:  KVADRLAK
        + AD LAK
Subjt:  KVADRLAK

AT4G29090.1 Ribonuclease H-like superfamily protein1.0e-3627.51Show/hide
Query:  KVKEFISPSG-DWNLQKLDFAVLSSYIHLIRKI-PINQLLEDKLVWHFDKTGSYTVKSGY---NLFIKSKIDGISSSTSHMNKIWKSIWNLKVPPKIKHF
        KV + I  SG +W    ++         LI ++ P  + + D   W +  +G YTVKSGY      I  +      S   +N I++ IW  +  PKI+HF
Subjt:  KVKEFISPSG-DWNLQKLDFAVLSSYIHLIRKI-PINQLLEDKLVWHFDKTGSYTVKSGY---NLFIKSKIDGISSSTSHMNKIWKSIWNLKVPPKIKHF

Query:  CWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYND-CFLDRWMNINSACSNEE----LGLVAVACWAIWS
         WK L+N LP    L  R +     C  C +  E+++H+LF C+ A+  W  +   +P+  ++ D  +++ +   N    N +      LV    W +W 
Subjt:  CWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYND-CFLDRWMNINSACSNEE----LGLVAVACWAIWS

Query:  DRNKIIHEEAIPPVNKRSFWIQEYLAK----YIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSNGKLIEASCK
        +RN+++          R F  QE L +      E   R EA   G     +  S   W PPP    K N DA W+      GIG V R   G++     +
Subjt:  DRNKIIHEEAIPPVNKRSFWIQEYLAK----YIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSNGKLIEASCK

Query:  FLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAK
         L        AEL A+   V          VI ESD QV +  LN   + W  ++  ++ +  L   F +++F +  R+ N +A+R+A+
Subjt:  FLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAK

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-1525.91Show/hide
Query:  WAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSNGKLIEASC
        W IW   N ++                    ++++ +   E  +    R++ P  N  W PP  D  K N DA+  +    +G+G + R S G +IE   
Subjt:  WAIWSDRNKIIHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSNGKLIEASC

Query:  KFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAKWARVRKCNNI
              M    AE   ++  ++ +   G K+VI E D Q     +N KS     ++  ++ I +    F+ I F +  R++N  AD LAK A   K N  
Subjt:  KFLDIAMDAPGAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAKWARVRKCNNI

Query:  WVEADVSPEWLLLLVENDLS
        W      P +L   V ND S
Subjt:  WVEADVSPEWLLLLVENDLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGGATCCGTGGGTTCCCAGAGAAAATACTTTTAAGCCTATTTGTGTCAATAACTCCTATCGGTCTGCAAAAGTTAAAGAGTTTATCTCCCCTAGTGGTGATTG
GAATTTGCAAAAATTAGATTTTGCTGTCCTTAGTAGTTATATTCATTTGATTAGGAAAATCCCTATAAACCAGCTTCTGGAAGACAAATTAGTGTGGCATTTTGACAAAA
CAGGGAGCTATACGGTTAAAAGTGGATACAATCTTTTCATTAAATCTAAAATCGATGGTATATCATCTAGCACAAGTCATATGAATAAAATCTGGAAATCTATTTGGAAT
CTTAAAGTTCCTCCCAAAATCAAACATTTTTGTTGGAAGGCCCTGAATAATATGCTTCCTACTAAAGTCATCCTAAAACAAAGAGGGATTGACAATAATCTCCTATGTCC
AATTTGCATGAATAAGCCTGAATCTATTGATCATATTCTGTTTAATTGTTCCAGAGCAAAAGAAATTTGGGTAAATACCTTTAATAAGCTGCCCATGAAAACTGACTATA
ATGACTGCTTTTTGGATAGGTGGATGAATATCAACTCGGCTTGTTCGAATGAGGAGCTTGGTCTTGTAGCAGTAGCTTGTTGGGCGATCTGGTCAGATAGAAACAAAATT
ATTCACGAGGAAGCTATTCCCCCAGTTAACAAAAGAAGTTTTTGGATTCAGGAATACCTTGCGAAATACATAGAAGCTTCCTCAAGGAGAGAGGCGATGCATGCAGGTGT
TACAAGGGATTCCTCTCCTCAGTCAAATAGAAACTGGATTCCCCCGCCTTCGGATGTTTGGAAATTCAATGTTGATGCGGCTTGGTCCGATTCTCTTCCGGAAACAGGAA
TTGGAGTAGTTTGTAGAGGTTCGAATGGGAAATTAATTGAAGCTTCTTGTAAATTTTTGGATATTGCGATGGATGCTCCTGGAGCTGAACTGAGGGCAATAATGGAGGGT
GTTAAAATGGCAAAATCGATGGGATGCAAAAGGGTTATCATTGAGTCAGATTGTCAAGTGGCAGTAAATTTCCTAAACAAGAAGTCCAAAACATGGTGCATTGTGGAGGG
CTTGGTGGAGGCGATTTGGGCTTTAGGCCTTTGTTTTGACGATATTCGATTTCAATATGCCCAGAGAGATAGAAACAAGGTGGCTGACAGACTAGCTAAATGGGCCAGAG
TGAGGAAATGTAATAATATTTGGGTTGAAGCTGATGTAAGCCCAGAATGGCTGTTGTTATTGGTCGAGAATGACCTTTCGTTTTTTGTCCATGTGGCGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAGGATCCGTGGGTTCCCAGAGAAAATACTTTTAAGCCTATTTGTGTCAATAACTCCTATCGGTCTGCAAAAGTTAAAGAGTTTATCTCCCCTAGTGGTGATTG
GAATTTGCAAAAATTAGATTTTGCTGTCCTTAGTAGTTATATTCATTTGATTAGGAAAATCCCTATAAACCAGCTTCTGGAAGACAAATTAGTGTGGCATTTTGACAAAA
CAGGGAGCTATACGGTTAAAAGTGGATACAATCTTTTCATTAAATCTAAAATCGATGGTATATCATCTAGCACAAGTCATATGAATAAAATCTGGAAATCTATTTGGAAT
CTTAAAGTTCCTCCCAAAATCAAACATTTTTGTTGGAAGGCCCTGAATAATATGCTTCCTACTAAAGTCATCCTAAAACAAAGAGGGATTGACAATAATCTCCTATGTCC
AATTTGCATGAATAAGCCTGAATCTATTGATCATATTCTGTTTAATTGTTCCAGAGCAAAAGAAATTTGGGTAAATACCTTTAATAAGCTGCCCATGAAAACTGACTATA
ATGACTGCTTTTTGGATAGGTGGATGAATATCAACTCGGCTTGTTCGAATGAGGAGCTTGGTCTTGTAGCAGTAGCTTGTTGGGCGATCTGGTCAGATAGAAACAAAATT
ATTCACGAGGAAGCTATTCCCCCAGTTAACAAAAGAAGTTTTTGGATTCAGGAATACCTTGCGAAATACATAGAAGCTTCCTCAAGGAGAGAGGCGATGCATGCAGGTGT
TACAAGGGATTCCTCTCCTCAGTCAAATAGAAACTGGATTCCCCCGCCTTCGGATGTTTGGAAATTCAATGTTGATGCGGCTTGGTCCGATTCTCTTCCGGAAACAGGAA
TTGGAGTAGTTTGTAGAGGTTCGAATGGGAAATTAATTGAAGCTTCTTGTAAATTTTTGGATATTGCGATGGATGCTCCTGGAGCTGAACTGAGGGCAATAATGGAGGGT
GTTAAAATGGCAAAATCGATGGGATGCAAAAGGGTTATCATTGAGTCAGATTGTCAAGTGGCAGTAAATTTCCTAAACAAGAAGTCCAAAACATGGTGCATTGTGGAGGG
CTTGGTGGAGGCGATTTGGGCTTTAGGCCTTTGTTTTGACGATATTCGATTTCAATATGCCCAGAGAGATAGAAACAAGGTGGCTGACAGACTAGCTAAATGGGCCAGAG
TGAGGAAATGTAATAATATTTGGGTTGAAGCTGATGTAAGCCCAGAATGGCTGTTGTTATTGGTCGAGAATGACCTTTCGTTTTTTGTCCATGTGGCGTTTTAA
Protein sequenceShow/hide protein sequence
MFEDPWVPRENTFKPICVNNSYRSAKVKEFISPSGDWNLQKLDFAVLSSYIHLIRKIPINQLLEDKLVWHFDKTGSYTVKSGYNLFIKSKIDGISSSTSHMNKIWKSIWN
LKVPPKIKHFCWKALNNMLPTKVILKQRGIDNNLLCPICMNKPESIDHILFNCSRAKEIWVNTFNKLPMKTDYNDCFLDRWMNINSACSNEELGLVAVACWAIWSDRNKI
IHEEAIPPVNKRSFWIQEYLAKYIEASSRREAMHAGVTRDSSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGIGVVCRGSNGKLIEASCKFLDIAMDAPGAELRAIMEG
VKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGLVEAIWALGLCFDDIRFQYAQRDRNKVADRLAKWARVRKCNNIWVEADVSPEWLLLLVENDLSFFVHVAF