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Lag0018417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr5:26423210..26423791
RNA-Seq ExpressionLag0018417
SyntenyLag0018417
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.3e-1431.85Show/hide
Query:  KLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTI-IEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFI
        ++ GS  +R  + L  S++ K  TNK IN E F   +  IW  ++ + +E +  N+F  + +N   + R+L+ GPW FDK +L+    +      +++F 
Subjt:  KLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTI-IEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFI

Query:  YVLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVD
        YV FWI  H LP AC +      +  L+G+V+++D
Subjt:  YVLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVD

TXG73522.1 hypothetical protein EZV62_002101 [Acer yangbiense]1.7e-1434.81Show/hide
Query:  LHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTI-IEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFIY
        L G+  +R  ++L  S++ KV  +K +N E F   M R+W     + IE ++ NVF  + KN+  + RVL  GPW FDK +L+ E P+       MEF  
Subjt:  LHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTI-IEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFIY

Query:  VLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVDI
          FW+  H LP  C S      +  ++G+V  VD+
Subjt:  VLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVDI

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]3.1e-1639.83Show/hide
Query:  MLSDRIAEMKVTEAEKACVFKLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKV
        +LS ++  +K+T+ EK  +F +    I+   KQ + S++CK+ T K I  E F   MPRIW   +  IE V  N+FLCK K VR K ++L++GP FFDK 
Subjt:  MLSDRIAEMKVTEAEKACVFKLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKV

Query:  MLLFEVPNVDIHTEEMEF
        M++ E P  + +  E+E+
Subjt:  MLLFEVPNVDIHTEEMEF

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.4e-1638.89Show/hide
Query:  MLSDRIAEMKVTEAEKACVFKL-HGSAIDRSVKQLEN-------SILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDD
        +LS  +  +K+T+ EK  +F +  G   D    ++E+       S++CK+ T K I  E F   MPRIW   +  IE V  N+FLCK K VR K ++L++
Subjt:  MLSDRIAEMKVTEAEKACVFKL-HGSAIDRSVKQLEN-------SILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDD

Query:  GPWFFDKVMLLFEVPNVDIHTEEMEF
        GPWFFDK M++ E P  + +  E+EF
Subjt:  GPWFFDKVMLLFEVPNVDIHTEEMEF

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]1.4e-1638.89Show/hide
Query:  MLSDRIAEMKVTEAEKACVFKL-HGSAIDRSVKQLEN-------SILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDD
        +LS  +  +K+T+ EK  +F +  G   D    ++E+       S++CK+ T K I  E F   MPRIW   +  IE V  N+FLCK K VR K ++L++
Subjt:  MLSDRIAEMKVTEAEKACVFKL-HGSAIDRSVKQLEN-------SILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDD

Query:  GPWFFDKVMLLFEVPNVDIHTEEMEF
        GPWFFDK M++ E P  + +  E+EF
Subjt:  GPWFFDKVMLLFEVPNVDIHTEEMEF

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein6.3e-1531.85Show/hide
Query:  KLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTI-IEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFI
        ++ GS  +R  + L  S++ K  TNK IN E F   +  IW  ++ + +E +  N+F  + +N   + R+L+ GPW FDK +L+    +      +++F 
Subjt:  KLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTI-IEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFI

Query:  YVLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVD
        YV FWI  H LP AC +      +  L+G+V+++D
Subjt:  YVLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVD

A0A5C7IY45 CCHC-type domain-containing protein8.3e-1534.81Show/hide
Query:  LHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTI-IEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFIY
        L G+  +R  ++L  S++ KV  +K +N E F   M R+W     + IE ++ NVF  + KN+  + RVL  GPW FDK +L+ E P+       MEF  
Subjt:  LHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTI-IEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFIY

Query:  VLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVDI
          FW+  H LP  C S      +  ++G+V  VD+
Subjt:  VLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVDI

A0A6J1CQJ5 uncharacterized protein LOC1110134131.5e-1639.83Show/hide
Query:  MLSDRIAEMKVTEAEKACVFKLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKV
        +LS ++  +K+T+ EK  +F +    I+   KQ + S++CK+ T K I  E F   MPRIW   +  IE V  N+FLCK K VR K ++L++GP FFDK 
Subjt:  MLSDRIAEMKVTEAEKACVFKLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDDGPWFFDKV

Query:  MLLFEVPNVDIHTEEMEF
        M++ E P  + +  E+E+
Subjt:  MLLFEVPNVDIHTEEMEF

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X16.8e-1738.89Show/hide
Query:  MLSDRIAEMKVTEAEKACVFKL-HGSAIDRSVKQLEN-------SILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDD
        +LS  +  +K+T+ EK  +F +  G   D    ++E+       S++CK+ T K I  E F   MPRIW   +  IE V  N+FLCK K VR K ++L++
Subjt:  MLSDRIAEMKVTEAEKACVFKL-HGSAIDRSVKQLEN-------SILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDD

Query:  GPWFFDKVMLLFEVPNVDIHTEEMEF
        GPWFFDK M++ E P  + +  E+EF
Subjt:  GPWFFDKVMLLFEVPNVDIHTEEMEF

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X26.8e-1738.89Show/hide
Query:  MLSDRIAEMKVTEAEKACVFKL-HGSAIDRSVKQLEN-------SILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDD
        +LS  +  +K+T+ EK  +F +  G   D    ++E+       S++CK+ T K I  E F   MPRIW   +  IE V  N+FLCK K VR K ++L++
Subjt:  MLSDRIAEMKVTEAEKACVFKL-HGSAIDRSVKQLEN-------SILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVDFNVFLCKLKNVRVKGRVLDD

Query:  GPWFFDKVMLLFEVPNVDIHTEEMEF
        GPWFFDK M++ E P  + +  E+EF
Subjt:  GPWFFDKVMLLFEVPNVDIHTEEMEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCAACGGTGTTTTGTGGTGTACGAGAATTCTGCGAATATAGAAGATTCCTGGGAGGTTGTTGGTGTCGTTTCCGAATACACTTTATGACTGAAACAAAGGATGC
TAATATGTTATCTGACCGCATAGCAGAAATGAAAGTAACAGAGGCTGAAAAGGCTTGTGTTTTCAAACTACATGGAAGTGCTATTGATAGATCTGTGAAGCAACTAGAGA
ACTCAATATTGTGCAAGGTTTTTACGAATAAAAAGATCAATCCGGAAACTTTTGCTTTACAGATGCCAAGGATATGGAACCAAGAACACACGATCATTGAACCGGTTGAC
TTCAACGTGTTCTTATGCAAATTAAAAAATGTTAGGGTGAAGGGACGGGTTCTAGACGATGGACCTTGGTTCTTTGATAAGGTTATGCTCTTGTTTGAGGTACCTAATGT
CGATATACATACAGAAGAGATGGAATTCATATATGTTTTGTTTTGGATTCATTTTCATAAGCTTCCTTTTGCTTGTTTCTCCATGTCATCGGCGAGGGAGATTGACATGT
TGCTTGGGAAAGTGGAACAAGTGGACATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCAACGGTGTTTTGTGGTGTACGAGAATTCTGCGAATATAGAAGATTCCTGGGAGGTTGTTGGTGTCGTTTCCGAATACACTTTATGACTGAAACAAAGGATGC
TAATATGTTATCTGACCGCATAGCAGAAATGAAAGTAACAGAGGCTGAAAAGGCTTGTGTTTTCAAACTACATGGAAGTGCTATTGATAGATCTGTGAAGCAACTAGAGA
ACTCAATATTGTGCAAGGTTTTTACGAATAAAAAGATCAATCCGGAAACTTTTGCTTTACAGATGCCAAGGATATGGAACCAAGAACACACGATCATTGAACCGGTTGAC
TTCAACGTGTTCTTATGCAAATTAAAAAATGTTAGGGTGAAGGGACGGGTTCTAGACGATGGACCTTGGTTCTTTGATAAGGTTATGCTCTTGTTTGAGGTACCTAATGT
CGATATACATACAGAAGAGATGGAATTCATATATGTTTTGTTTTGGATTCATTTTCATAAGCTTCCTTTTGCTTGTTTCTCCATGTCATCGGCGAGGGAGATTGACATGT
TGCTTGGGAAAGTGGAACAAGTGGACATTTAA
Protein sequenceShow/hide protein sequence
MGATVFCGVREFCEYRRFLGGCWCRFRIHFMTETKDANMLSDRIAEMKVTEAEKACVFKLHGSAIDRSVKQLENSILCKVFTNKKINPETFALQMPRIWNQEHTIIEPVD
FNVFLCKLKNVRVKGRVLDDGPWFFDKVMLLFEVPNVDIHTEEMEFIYVLFWIHFHKLPFACFSMSSAREIDMLLGKVEQVDI