| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-208 | 66.03 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
MSSSII+LLK +QLTGEN+ WKS LN ILV+ DL FVL EECPP P + A+Q+V+DAY+RWTKAN+K +++IL S+S++L+K++E + TAR+IM+SL+E
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQSKGKRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGD
MFG PS Q +K EANVAHSK++F VP S S++IQKRK
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQSKGKRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGD
Query: KGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLLVLETCLVEHDEFSWILDSGATNHVCSSFQ-GNNFQQLAEGEMT
KGK P AV+ KGKAK VA K +CFHCN D HWK NCP+YL K++EKEGK+DLLVLETCLVE+D+ +WILDSGATNHVCSS Q ++F+QL + EMT
Subjt: KGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLLVLETCLVEHDEFSWILDSGATNHVCSSFQ-GNNFQQLAEGEMT
Query: LKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAE
LKVGTGDV+SARAVG AKLFF N+F+ LENLY+VP+IKRNL+SVS L+E YS++F +NEA I KNGV+ICSAK ENNL+VLRPN+AKA+L+HEMF+TA
Subjt: LKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAE
Query: TQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFI
TQNKRQ++SP +NNTYLWHLRLGHIN+D I RLVKNGLL+ ++D SLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGG+EYFISFI
Subjt: TQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFI
Query: DDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQ
DDYSRYGYLYLM HKSEALE+FKE+K EVENLL K IK LRSDRGGEY+D RFQDYMIEHGIQSQLSAPGTPQQ
Subjt: DDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQ
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 2.4e-205 | 60.45 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK + YIL SLSEVLAK++E++ TAREIM+SLQE
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+ E NG V+ E SQ KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
Query: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLL
+ KGEANVA S +KF +GS+SGTKS+P +S +K+ +K+KG +G A K K A KG CFHCN +GHWK NCP+YLAEK++ K+GK+DLL
Subjt: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLL
Query: VLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFL
VLETCLVE+D+ +WI+DSGATNHVCSSFQG ++++QL GEMT++VGTG VVSA AVG +L + FL+LEN+Y+VP +KRNLISV LLEQ YS++F
Subjt: VLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFL
Query: LNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGK
+N+ I KNGV ICSAK ENNL+VLR +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++ I+RLVKNGLLS++E+ SLP CESCLEGK
Subjt: LNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGK
Query: MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYM
MTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALE+FKE+KAEVEN L K IKT RSDRGGEY+D +FQ+Y+
Subjt: MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYM
Query: IEHGIQSQLSAPGTPQQ
+E GI SQLSAPGTPQQ
Subjt: IEHGIQSQLSAPGTPQQ
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| KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-205 | 60.84 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK + YIL SLSEVLAK++E++ TAREIM+SLQE
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+ E NG V+ E SQ KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
Query: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDL
+ KGEANVA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA A + KAK A KG CFHCN +GHWK NCP+YLAEK++ K+GK+DL
Subjt: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDL
Query: LVLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSF
LVLETCLVE+D+ +WI+DSGATNHVCSSFQG +++QQL GEMT++VGTG VVSA AVG +L+ + FL+LEN+Y+VP +KRNLISV LLEQ YS++F
Subjt: LVLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSF
Query: LLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEG
+N+ I KNGV ICSAK ENNL+VLR +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++ I+RLVKNGLLS++E+ SLP CESCLEG
Subjt: LLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEG
Query: KMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDY
KMTKRPFTGKG+RAKEPLEL+HS+LCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALE+FKE+KAEVEN L K IKT RSDRGGEY+D +FQ+Y
Subjt: KMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDY
Query: MIEHGIQSQLSAPGTPQQ
++E GI SQLSAPGTPQQ
Subjt: MIEHGIQSQLSAPGTPQQ
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 3.1e-205 | 60.84 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK + YIL SLSEVLAK++E++ TAREIM+SLQE
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+ E NG V+ E SQ KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
Query: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDL
+ KGEANVA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA A + KAK A KG CFHCN +GHWK NCP+YLAEK++ K+GK+DL
Subjt: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDL
Query: LVLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSF
LVLETCLVE+D+ +WI+DSGATNHVCSSFQG ++++QL GEMT++VGTG VVSA AVG +L + FL+LEN+Y+VP +KRNLISV LLEQ YS++F
Subjt: LVLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSF
Query: LLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEG
+N+ I KNGV ICSAK ENNL+VLR +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++ I+RLVKNGLLS++E+ SLP CESCLEG
Subjt: LLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEG
Query: KMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDY
KMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALE+FKE+KAEVEN L K IKT RSDRGGEY+D +FQ+Y
Subjt: KMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDY
Query: MIEHGIQSQLSAPGTPQQ
++E GI SQLSAPGTPQQ
Subjt: MIEHGIQSQLSAPGTPQQ
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 2.4e-205 | 60.45 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK + YIL SLSEVLAK++E++ TAREIM+SLQE
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+ E NG V+ E SQ KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
Query: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLL
+ KGEANVA S +KF +GS+SGTKS+P +S +K+ +K+KG +G A K K A KG CFHCN +GHWK NCP+YLAEK++ K+GK+DLL
Subjt: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLL
Query: VLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFL
VLETCLVE+D+ +WI+DSGATNHVCSSFQG ++++QL GEMT++VGTG VVSA AVG +L + FL+LEN+Y+VP +KRNLISV LLEQ YS++F
Subjt: VLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFL
Query: LNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGK
+N+ I KNGV ICSAK ENNL+VLR +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++ I+RLVKNGLLS++E+ SLP CESCLEGK
Subjt: LNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGK
Query: MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYM
MTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALE+FKE+KAEVEN L K IKT RSDRGGEY+D +FQ+Y+
Subjt: MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYM
Query: IEHGIQSQLSAPGTPQQ
+E GI SQLSAPGTPQQ
Subjt: IEHGIQSQLSAPGTPQQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.5e-205 | 60.84 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK + YIL SLSEVLAK++E++ TAREIM+SLQE
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+ E NG V+ E SQ KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
Query: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDL
+ KGEANVA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA A + KAK A KG CFHCN +GHWK NCP+YLAEK++ K+GK+DL
Subjt: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDL
Query: LVLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSF
LVLETCLVE+D+ +WI+DSGATNHVCSSFQG ++++QL GEMT++VGTG VVSA AVG +L + FL+LEN+Y+VP +KRNLISV LLEQ YS++F
Subjt: LVLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSF
Query: LLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEG
+N+ I KNGV ICSAK ENNL+VLR +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++ I+RLVKNGLLS++E+ SLP CESCLEG
Subjt: LLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEG
Query: KMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDY
KMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALE+FKE+KAEVEN L K IKT RSDRGGEY+D +FQ+Y
Subjt: KMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDY
Query: MIEHGIQSQLSAPGTPQQ
++E GI SQLSAPGTPQQ
Subjt: MIEHGIQSQLSAPGTPQQ
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| A0A5A7TU93 Gag/pol protein | 5.2e-206 | 60.84 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK + YIL SLSEVLAK++E++ TAREIM+SLQE
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+ E NG V+ E SQ KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
Query: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDL
+ KGEANVA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA A + KAK A KG CFHCN +GHWK NCP+YLAEK++ K+GK+DL
Subjt: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDL
Query: LVLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSF
LVLETCLVE+D+ +WI+DSGATNHVCSSFQG +++QQL GEMT++VGTG VVSA AVG +L+ + FL+LEN+Y+VP +KRNLISV LLEQ YS++F
Subjt: LVLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSF
Query: LLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEG
+N+ I KNGV ICSAK ENNL+VLR +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++ I+RLVKNGLLS++E+ SLP CESCLEG
Subjt: LLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEG
Query: KMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDY
KMTKRPFTGKG+RAKEPLEL+HS+LCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALE+FKE+KAEVEN L K IKT RSDRGGEY+D +FQ+Y
Subjt: KMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDY
Query: MIEHGIQSQLSAPGTPQQ
++E GI SQLSAPGTPQQ
Subjt: MIEHGIQSQLSAPGTPQQ
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| A0A5A7TZD0 Gag/pol protein | 1.9e-208 | 66.03 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
MSSSII+LLK +QLTGEN+ WKS LN ILV+ DL FVL EECPP P + A+Q+V+DAY+RWTKAN+K +++IL S+S++L+K++E + TAR+IM+SL+E
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQSKGKRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGD
MFG PS Q +K EANVAHSK++F VP S S++IQKRK
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQSKGKRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGD
Query: KGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLLVLETCLVEHDEFSWILDSGATNHVCSSFQ-GNNFQQLAEGEMT
KGK P AV+ KGKAK VA K +CFHCN D HWK NCP+YL K++EKEGK+DLLVLETCLVE+D+ +WILDSGATNHVCSS Q ++F+QL + EMT
Subjt: KGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLLVLETCLVEHDEFSWILDSGATNHVCSSFQ-GNNFQQLAEGEMT
Query: LKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAE
LKVGTGDV+SARAVG AKLFF N+F+ LENLY+VP+IKRNL+SVS L+E YS++F +NEA I KNGV+ICSAK ENNL+VLRPN+AKA+L+HEMF+TA
Subjt: LKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAE
Query: TQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFI
TQNKRQ++SP +NNTYLWHLRLGHIN+D I RLVKNGLL+ ++D SLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGG+EYFISFI
Subjt: TQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFI
Query: DDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQ
DDYSRYGYLYLM HKSEALE+FKE+K EVENLL K IK LRSDRGGEY+D RFQDYMIEHGIQSQLSAPGTPQQ
Subjt: DDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQ
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| A0A5D3CPJ6 Gag/pol protein | 1.2e-205 | 60.45 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK + YIL SLSEVLAK++E++ TAREIM+SLQE
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+ E NG V+ E SQ KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
Query: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLL
+ KGEANVA S +KF +GS+SGTKS+P +S +K+ +K+KG +G A K K A KG CFHCN +GHWK NCP+YLAEK++ K+GK+DLL
Subjt: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLL
Query: VLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFL
VLETCLVE+D+ +WI+DSGATNHVCSSFQG ++++QL GEMT++VGTG VVSA AVG +L + FL+LEN+Y+VP +KRNLISV LLEQ YS++F
Subjt: VLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFL
Query: LNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGK
+N+ I KNGV ICSAK ENNL+VLR +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++ I+RLVKNGLLS++E+ SLP CESCLEGK
Subjt: LNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGK
Query: MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYM
MTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALE+FKE+KAEVEN L K IKT RSDRGGEY+D +FQ+Y+
Subjt: MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYM
Query: IEHGIQSQLSAPGTPQQ
+E GI SQLSAPGTPQQ
Subjt: IEHGIQSQLSAPGTPQQ
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| A0A5D3CSZ6 Gag/pol protein | 1.2e-205 | 60.45 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK + YIL SLSEVLAK++E++ TAREIM+SLQE
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQE
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+ E NG V+ E SQ KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQ-------------------------------------------SKG
Query: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLL
+ KGEANVA S +KF +GS+SGTKS+P +S +K+ +K+KG +G A K K A KG CFHCN +GHWK NCP+YLAEK++ K+GK+DLL
Subjt: KRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFDLL
Query: VLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFL
VLETCLVE+D+ +WI+DSGATNHVCSSFQG ++++QL GEMT++VGTG VVSA AVG +L + FL+LEN+Y+VP +KRNLISV LLEQ YS++F
Subjt: VLETCLVEHDEFSWILDSGATNHVCSSFQG-NNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFL
Query: LNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGK
+N+ I KNGV ICSAK ENNL+VLR +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++ I+RLVKNGLLS++E+ SLP CESCLEGK
Subjt: LNEALISKNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGK
Query: MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYM
MTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALE+FKE+KAEVEN L K IKT RSDRGGEY+D +FQ+Y+
Subjt: MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYM
Query: IEHGIQSQLSAPGTPQQ
+E GI SQLSAPGTPQQ
Subjt: IEHGIQSQLSAPGTPQQ
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.9e-27 | 23.89 | Show/hide |
Query: GENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQEMFGLPSYQLHHDALK
GE + WK + +L +D+ V+ P + + W KA K I+ LS+ + TAR+I+ +L ++ S K
Subjt: GENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQEMFGLPSYQLHHDALK
Query: NVFNAKMLEGQSVREHV-------------------LDMINQFNIV--EANGGVV--CERSQSKGKRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSK
+ + K+ S+ H +D I+ I G++ E + + + + + K + +K V A
Subjt: NVFNAKMLEGQSVREHV-------------------LDMINQFNIV--EANGGVV--CERSQSKGKRVVKGEANVAHSKKKFLKGSSSGTKSVPQASSSK
Query: RIQKRKGDKGK----APAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNC---PRYLAEKRREKEGKFD--------LLVLETCLVE-HDEFSWILDSG
K + K P + +G K KV +C HC +GH K +C R L K +E E + +V E D ++LDSG
Subjt: RIQKRKGDKGK----APAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNC---PRYLAEKRREKEGKFD--------LLVLETCLVE-HDEFSWILDSG
Query: ATNHVCSSFQGNNFQQLAEGEMTLKVGT---GDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISKNGVYIC-SA
A++H+ + + + E LK+ G+ + A G +L + + LE++ NL+SV L E S+ F + ISKNG+ + ++
Subjt: ATNHVCSSFQGNNFQQLAEGEMTLKVGT---GDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISKNGVYIC-SA
Query: KRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIE-----DTSLPPCESCLEGKMTKRPFTGKGY
NN+ V+ A + N + K NN LWH R GHI+ + + + + SD + S CE CL GK + PF
Subjt: KRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIE-----DTSLPPCESCLEGKMTKRPFTGKGY
Query: RA--KEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQSQL
+ K PL ++HSD+CGP+ YF+ F+D ++ Y YL+ +KS+ F++F A+ E + L D G EYL + + ++ GI L
Subjt: RA--KEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQSQL
Query: SAPGTPQ
+ P TPQ
Subjt: SAPGTPQ
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.6e-41 | 24.96 | Show/hide |
Query: QLTGEN-FPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQEMFGLPSYQLHH
+ G+N F W+ + +L+ + L VL + A E W +E+ I + LS+ + + +TAR I L+ ++ +
Subjt: QLTGEN-FPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQEMFGLPSYQLHH
Query: DALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQS--------------------KGKRVV--KGEANVAHSKKKFLKGSSSGTKSVPQAS
K ++ M EG + H L++ N AN GV E GK + K + +K K + +++
Subjt: DALKNVFNAKMLEGQSVREHVLDMINQFNIVEANGGVVCERSQS--------------------KGKRVV--KGEANVAHSKKKFLKGSSSGTKSVPQAS
Query: SSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFD-------------LLVL---ETCL-VEHDEFSWI
+ Q+ + G++ A +GK K + + C++CN GH+K +CP K K D +L + E C+ + E W+
Subjt: SSKRIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPRYLAEKRREKEGKFD-------------LLVL---ETCL-VEHDEFSWI
Query: LDSGATNH------VCSSFQGNNFQQLAEGEMTLK--VGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISK
+D+ A++H + + +F + G + G GD+ VG L+L+++ VP ++ NLIS AL Y F + ++K
Subjt: LDSGATNH------VCSSFQGNNFQQLAEGEMTLK--VGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISK
Query: NGVYICSAKRENNLFVLRPNDAKAILSHEMFKT-AETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGKMTKRPFT
+ I AK + +++T AE + + LWH R+GH++ + L K L+S + T++ PC+ CL GK + F
Subjt: NGVYICSAKRENNLFVLRPNDAKAILSHEMFKT-AETQNKRQKVSPLSNNTYLWHLRLGHINIDWIDRLVKNGLLSDIEDTSLPPCESCLEGKMTKRPFT
Query: GKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQS
R L+L++SD+CGPM +++ GG +YF++FIDD SR ++Y++ K + + F++F A VE G+ +K LRSD GGEY + F++Y HGI+
Subjt: GKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQS
Query: QLSAPGTPQ
+ + PGTPQ
Subjt: QLSAPGTPQ
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 8.1e-15 | 26.38 | Show/hide |
Query: ILDSGATNHVCSSFQGNNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISKNGVYICS
++DSGA+ + S + E+ + + A+G F+N P I +L+S+S L Q + F N L +G +
Subjt: ILDSGATNHVCSSFQGNNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLEQCYSVSFLLNEALISKNGVYICS
Query: AKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTY---LWHLRLGHINIDWIDRLVKNGLL-----SDIE--DTSLPPCESCLEGKMTKRP
+ + + L + I SH T NK + V N Y L H LGH N I + +K + SDIE + S C CL GK TK
Subjt: AKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTY---LWHLRLGHINIDWIDRLVKNGLL-----SDIE--DTSLPPCESCLEGKMTKRP
Query: FTGKGYRAK-----EPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSE--ALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQD
KG R K EP + +H+D+ GP++ + YFISF D+ +R+ ++Y + + E L F A ++N + ++ DRG EY ++
Subjt: FTGKGYRAK-----EPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSE--ALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQD
Query: YMIEHGI
+ GI
Subjt: YMIEHGI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.0e-30 | 30.23 | Show/hide |
Query: SWILDSGATNHVCSSFQGNNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLE------QCYSVSFLLNEALIS
+W+LDSGAT+H+ S F + Q G + V G + G+ L ++R L L N+ VP I +NLISV L + + SF + +
Subjt: SWILDSGATNHVCSSFQGNNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLE------QCYSVSFLLNEALIS
Query: KNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTY-LWHLRLGHINIDWIDRLVKNGLLSDIEDT-SLPPCESCLEGKMTKRP
GV + K ++ L+ + A +Q SP S T+ WH RLGH ++ ++ N LS + + C CL K K P
Subjt: KNGVYICSAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTY-LWHLRLGHINIDWIDRLVKNGLLSDIEDT-SLPPCESCLEGKMTKRP
Query: FTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGI
F+ + PLE I+SD+ + + Y Y++ F+D ++RY +LY + KS+ E F FK +EN I T SD GGE++ +Y +HGI
Subjt: FTGKGYRAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGI
Query: QSQLSAPGTPQ
S P TP+
Subjt: QSQLSAPGTPQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-32 | 24.34 | Show/hide |
Query: QLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRT----AAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQEMFGLPSYQ
+LT N+ W ++ + +L L + P+PP T A V Y RW + ++ + IL ++S + TA +I +L++++ PSY
Subjt: QLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRT----AAQAVKDAYERWTKANEKVKVYILVSLSEVLAKRYENVETAREIMNSLQEMFGLPSYQ
Query: LHHDALKNVFN-------AKMLEGQSVREHVLDMINQFNIVEANGGVVCE-RSQSKGKRVVKGEANVAHSKKKFLKGSSSGTKSVP------QASSSKRI
H L+ + K ++ E VL+ N+ + V+ + ++ + + + + + K L +S+ + + +++ R
Subjt: LHHDALKNVFN-------AKMLEGQSVREHVLDMINQFNIVEANGGVVCE-RSQSKGKRVVKGEANVAHSKKKFLKGSSSGTKSVP------QASSSKRI
Query: QKRKGDKGK-----------APAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPR----YLAEKRREKEGKFDLLVLETCLVEHDEF---SWILDSG
Q +GD P+ + + GRC C+ GH CP+ +++ F L + + +W+LDSG
Subjt: QKRKGDKGK-----------APAQAVQGKGKAKVVADKGRCFHCNADGDGHWKHNCPR----YLAEKRREKEGKFDLLVLETCLVEHDEF---SWILDSG
Query: ATNHVCSSFQGNNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLE------QCYSVSFLLNEALISKNGVYIC
AT+H+ S F +F Q G + + G + G+A L +R L L + VP I +NLISV L + + SF + + GV +
Subjt: ATNHVCSSFQGNNFQQLAEGEMTLKVGTGDVVSARAVGAAKLFFRNRFLILENLYLVPRIKRNLISVSALLE------QCYSVSFLLNEALISKNGVYIC
Query: SAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTY-LWHLRLGHINIDWIDRLVKNGLLSDIEDT-SLPPCESCLEGKMTKRPFTGKGYR
K ++ L+ + A +Q SP S T+ WH RLGH ++ ++ ++ N L + + L C C K K PF+
Subjt: SAKRENNLFVLRPNDAKAILSHEMFKTAETQNKRQKVSPLSNNTY-LWHLRLGHINIDWIDRLVKNGLLSDIEDT-SLPPCESCLEGKMTKRPFTGKGYR
Query: AKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAP
+ +PLE I+SD+ + + Y Y++ F+D ++RY +LY + KS+ + F FK+ VEN I TL SD GGE++ R DY+ +HGI S P
Subjt: AKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMGHKSEALERFKEFKAEVENLLGKMIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAP
Query: GTPQ
TP+
Subjt: GTPQ
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