CuGenDBv2

Gene ID	Lag0018427
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome location	chr5:26830407..26832978
RNA-Seq Expression	Lag0018427
Synteny	Lag0018427
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0070469 - respirasome (cellular component)
InterPro domains	IPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033972.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]

1.2e-68

93.75

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
        NSKEG LRK+ISTGQV GPDLKSFIRQ PTGSE  QD EGL  R
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

XP_004152928.1 uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus]

1.3e-67

92.36

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
        NSKEGNLRK+ISTGQV GPDLKSFIRQ PTGSE  QD EGL  R
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

XP_031738721.1 uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]

1.3e-67

92.36

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
        NSKEGNLRK+ISTGQV GPDLKSFIRQ PTGSE  QD EGL  R
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

XP_038903173.1 uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]

1.3e-70

95.14

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
        NSKEGNLRK+ISTGQV GPDLKSFIRQFPTGSE  QD EGL  R
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

XP_038903174.1 uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]

1.3e-70

95.14

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
        NSKEGNLRK+ISTGQV GPDLKSFIRQFPTGSE  QD EGL  R
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L526 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

6.4e-68

92.36

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
        NSKEGNLRK+ISTGQV GPDLKSFIRQ PTGSE  QD EGL  R
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

A0A5A7SS01 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

5.8e-69

93.75

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
        NSKEG LRK+ISTGQV GPDLKSFIRQ PTGSE  QD EGL  R
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

A0A5D3BTS9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

5.4e-67

96.32

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQ
        NSKEG LRK+ISTGQV GPDLKSFIRQ PTGSE TQ
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQ

A0A6J1DNE9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

3.0e-65

87.5

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
        NS+EGNLRKVIS  QV GPDL SFIRQFPTGSE  QDEEG AAR
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

A0A6J1JVV8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

3.3e-64

88.89

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKLF KIAGFF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR
         SKE NLRKV+ST  V GP+LKSFIRQFPTGSE  QD EG AA+
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAAR

SwissProt top hits

e value

%identity

Alignment

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

5.7e-05

44.07

Show/hide

Query:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT
        TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Subjt:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT

Q59J78 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2

4.8e-04

28.23

Show/hide

Query:  RTLVGVDKAGNRYFFVKEEID---GIMKEKRWVVFKG----EDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVR-QNVALLKKEEMERNSKEGN
        R  VG D  GN+Y++V E  +     ++EKR V        + +   IP EW  W+   RK  PT EE+++ E  RE ++ ++    +K+++ + + E  
Subjt:  RTLVGVDKAGNRYFFVKEEID---GIMKEKRWVVFKG----EDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVR-QNVALLKKEEMERNSKEGN

Query:  LRKVISTGQVGGPDLKSFIRQFPT
        L    +T   G      F R+ P+
Subjt:  LRKVISTGQVGGPDLKSFIRQFPT

Arabidopsis top hits

e value

%identity

Alignment

AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

2.1e-47

65.47

Show/hide

Query:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MS+L+ + AG FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE E+
Subjt:  MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEE
         ++ G  RK I+ G+V GPDL SF+RQFP  S+  + EE
Subjt:  NSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQDEE

AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

9.2e-35

70.59

Show/hide

Query:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQD
        MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPDL SF+RQFP  S+  + 
Subjt:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKVISTGQVGGPDLKSFIRQFPTGSEDTQD

Query:  EE
        EE
Subjt:  EE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGAAGCTTTTCGGGAAAATTGCCGGCTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAATAGATACTTCTTTGTAAAAGAAGAAATCGATGGCAT
AATGAAAGAGAAGAGATGGGTGGTGTTTAAGGGTGAGGATGATCCAACGTCAATTCCCGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAG
AGGAAATGATGGAGCTAGAAGCTAGGCGAGAACGTGTTCGACAAAATGTTGCCCTTCTCAAGAAAGAAGAGATGGAGAGAAATTCTAAAGAAGGCAATTTAAGGAAAGTC
ATCAGCACTGGTCAAGTTGGAGGTCCTGACTTGAAAAGCTTTATTCGACAATTTCCAACTGGTTCAGAAGATACCCAAGATGAGGAAGGATTGGCTGCAAGGGGGATATC
TTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKV
ISTGQVGGPDLKSFIRQFPTGSEDTQDEEGLAARGIS

Lag0018427 (gene) of Sponge gourd (AG-4) v1 genome