; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018428 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018428
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr5:26849839..26850318
RNA-Seq ExpressionLag0018428
SyntenyLag0018428
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4400725.1 hypothetical protein G4B88_001280 [Cannabis sativa]1.2e-0541.07Show/hide
Query:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW
        K +W +++ PR K+  W+V ++ +P K N+  RGMD+N+ C +C   EET TH +W
Subjt:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW

KAG6721291.1 hypothetical protein I3842_03G106200 [Carya illinoinensis]2.9e-0746.43Show/hide
Query:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW
        KK+W +K+ P  KI +WKV N+ IP  AN+ +R +  +S C++CK + ETS+HV+W
Subjt:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW

XP_021851943.1 uncharacterized protein LOC110791500 [Spinacia oleracea]4.2e-0641.67Show/hide
Query:  PPKIFGKKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHV
        PP I+ K  W + I+P+ KI +WK+++D +P  A +  RGMDV+ +C LC  +EE  +H+
Subjt:  PPKIFGKKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHV

XP_024155813.1 uncharacterized protein LOC112163786 [Rosa chinensis]2.7e-0534.92Show/hide
Query:  FGKKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVWHSRVA
        F KK W  K+  + K+C+WK   D +P ++N++++ M+V   C LC+ +EET  H+  +  +A
Subjt:  FGKKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVWHSRVA

XP_030931246.1 uncharacterized protein LOC115957168 [Quercus lobata]7.2e-0637.7Show/hide
Query:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVWHSRVA
        +K+W + I  + K+ VW+  + ++P +AN++++ +  +S CVLCKC  ET  HV+W   VA
Subjt:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVWHSRVA

TrEMBL top hitse value%identityAlignment
A0A7J6FZ95 Uncharacterized protein1.7e-0538.24Show/hide
Query:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTH--------------VVWHSRVA-ANKGQMGRSIEANIKEQ-DAREIS
        K LW + + PR K+  W+V ++ +P K N+  RGMDVN  C LC  + ET TH              V W+ + A  NKG M   I   +KEQ D  E  
Subjt:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTH--------------VVWHSRVA-ANKGQMGRSIEANIKEQ-DAREIS

Query:  DA
        DA
Subjt:  DA

A0A7J6GEH9 Uncharacterized protein1.7e-0541.07Show/hide
Query:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW
        K +W +++ PR K+  W+V ++ +P K N++ RGM VN +C  C    ET THV+W
Subjt:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW

A0A7J6I0H3 RNase H domain-containing protein5.9e-0641.07Show/hide
Query:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW
        K +W +++ PR K+  W+V ++ +P K N+  RGMD+N+ C +C   EET TH +W
Subjt:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW

A0A803Q6D6 Uncharacterized protein1.3e-0544.64Show/hide
Query:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW
        K LW + + PR K+  W+V ++ +P K N+  RGMDVN  C LC  + ET TH +W
Subjt:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW

A0A803QEE2 Uncharacterized protein7.8e-0641.07Show/hide
Query:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW
        K +W +K+ PR K+  W+V ++ +P K N++ RGM+VN  C  C+   ET TH +W
Subjt:  KKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-0629.58Show/hide
Query:  LWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVWHSRVAANKGQMGRSIEA
        +W +KI P+ K+ +WK +N+ +P  A ++ R + +   C  C+   ET TH++++   A  +  M   I+A
Subjt:  LWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVWHSRVAANKGQMGRSIEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACCTCCCCCAAAAATCTTTGGAAAAAAGTTGTGGGATATCAAGATTATTCCTAGAGCTAAGATTTGTGTCTGGAAAGTTATCAATGATGTGATCCCCTGTAAGGC
TAATGTTATTGAAAGAGGGATGGATGTTAACTCGCTGTGTGTTTTGTGCAAGTGCAAGGAAGAGACCTCCACTCATGTGGTGTGGCATTCAAGAGTAGCAGCAAACAAAG
GGCAGATGGGTAGATCAATTGAGGCCAACATTAAGGAGCAAGATGCAAGAGAGATTAGTGATGCTACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATACCTCCCCCAAAAATCTTTGGAAAAAAGTTGTGGGATATCAAGATTATTCCTAGAGCTAAGATTTGTGTCTGGAAAGTTATCAATGATGTGATCCCCTGTAAGGC
TAATGTTATTGAAAGAGGGATGGATGTTAACTCGCTGTGTGTTTTGTGCAAGTGCAAGGAAGAGACCTCCACTCATGTGGTGTGGCATTCAAGAGTAGCAGCAAACAAAG
GGCAGATGGGTAGATCAATTGAGGCCAACATTAAGGAGCAAGATGCAAGAGAGATTAGTGATGCTACCTAG
Protein sequenceShow/hide protein sequence
MIPPPKIFGKKLWDIKIIPRAKICVWKVINDVIPCKANVIERGMDVNSLCVLCKCKEETSTHVVWHSRVAANKGQMGRSIEANIKEQDAREISDAT