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Lag0018433 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018433
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMyb/SANT-like domain containing protein
Genome locationchr5:27009540..27010109
RNA-Seq ExpressionLag0018433
SyntenyLag0018433
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3950503.1 hypothetical protein CMV_023756 [Castanea mollissima]5.0e-0732.26Show/hide
Query:  SSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTLECNSR
        + +P Q ++S+ L+KK+ R+ D+L+E +  ++ + G  YE+T  ++  IA  F+ ++  +ERR  +F EL+ +EGL+ ++R++A   L  ++R
Subjt:  SSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTLECNSR

KAF3950504.1 hypothetical protein CMV_023756 [Castanea mollissima]5.0e-0732.26Show/hide
Query:  SSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTLECNSR
        + +P Q ++S+ L+KK+ R+ D+L+E +  ++ + G  YE+T  ++  IA  F+ ++  +ERR  +F EL+ +EGL+ ++R++A   L  ++R
Subjt:  SSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTLECNSR

PON99940.1 hypothetical protein TorRG33x02_043580 [Trema orientale]3.8e-0742.05Show/hide
Query:  SSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL
        SS P  S  S K S+K+ RN D LV+++T +L      +   +ENI K AKYF+ +   + RR  +F EL  V+GLT+AQRV+  + L
Subjt:  SSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL

XP_024029924.1 uncharacterized protein LOC21412682 [Morus notabilis]2.1e-0533.33Show/hide
Query:  DDQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERT
        D+ +D+ S+  P     +    S +  +K+ + GD LV+ +T ++     MY    ENIG++A  F+ +   + RR  +F E+  VEGLT+AQRVR  + 
Subjt:  DDQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERT

Query:  LECNSRFN
        L  N  +N
Subjt:  LECNSRFN

XP_024030261.1 uncharacterized protein LOC112094190 [Morus notabilis]1.0e-0433.66Show/hide
Query:  VDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTLEC
        +D+ S+  P +   +   TS +  +K+ ++ D LV+ +T ++     MY    ENIG++A  F+ +   + RR  +F E+  VEGLT+AQRVR  + L  
Subjt:  VDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTLEC

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A2P5FL77 Myb/SANT-like domain containing protein6.6e-0538.1Show/hide
Query:  DDQVDSMSMDEPDS-SLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAER
        DD   + S+  P + S  TQS    K SKK+ R+ D L++++T ++   G M+  + E I KIA  F+ +   + RR  +F EL  V GLT++QRVR  R
Subjt:  DDQVDSMSMDEPDS-SLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAER

Query:  TLECN
         L  N
Subjt:  TLECN

A0A2P5FQC0 Uncharacterized protein1.9e-0742.05Show/hide
Query:  SSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL
        SS P  S  S K S+K+ RN D LV+++T +L      +   +ENI K AKYF+ +   + RR  +F EL  V+GLT+AQRV+  + L
Subjt:  SSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL

A0A7J6E1G7 Uncharacterized protein4.3e-0432.04Show/hide
Query:  DQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL
        D +D M+ +   +S    S T+RK +K+K  NGD LVE+++ S+     M    +++I K+A  F+ +   + RR  ++ E+  V+GLT++QR++  + L
Subjt:  DQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL

Query:  ECN
          N
Subjt:  ECN

A0A7J6G4Q9 Uncharacterized protein4.3e-0432.04Show/hide
Query:  DQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL
        D +D M+ +   +S    S T+RK +K+K  NGD LVE+++ S+     M    +++I K+A  F+ +   + RR  ++ E+  V+GLT++QR++  + L
Subjt:  DQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL

Query:  ECN
          N
Subjt:  ECN

A0A803QNC5 Uncharacterized protein4.3e-0432.04Show/hide
Query:  DQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL
        D +D M+ +   +S    S T+RK +K+K  NGD LVE+++ S+     M    +++I K+A  F+ +   + RR  ++ E+  V+GLT++QR++  + L
Subjt:  DQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTL

Query:  ECN
          N
Subjt:  ECN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAACAGGTGTTGATGATCAGGTGGATTCTATGTCCATGGATGAGCCTGATTCAAGCCTTCCAACTCAATCTAATACTTCTCGCAAATTATCAAAGAAAAAGGT
AAGGAATGGAGATAAATTAGTTGAAATTGTGACTACATCTTTGGATAACATGGGTGTGATGTATGAGAAAACAACTGAAAACATCGGAAAGATAGCTAAGTATTTTGAAA
CTCAAACTGTTGTTTCTGAAAGGAGAACTCATATATTTACTGAGCTTGTAGATGTTGAAGGGCTAACAGATGCTCAAAGAGTTCGAGCAGAAAGAACTCTAGAGTGTAAC
TCAAGATTCAATCTAGTTGTTTCAAGTGGTCATAGTTGTTTGAAGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAACAGGTGTTGATGATCAGGTGGATTCTATGTCCATGGATGAGCCTGATTCAAGCCTTCCAACTCAATCTAATACTTCTCGCAAATTATCAAAGAAAAAGGT
AAGGAATGGAGATAAATTAGTTGAAATTGTGACTACATCTTTGGATAACATGGGTGTGATGTATGAGAAAACAACTGAAAACATCGGAAAGATAGCTAAGTATTTTGAAA
CTCAAACTGTTGTTTCTGAAAGGAGAACTCATATATTTACTGAGCTTGTAGATGTTGAAGGGCTAACAGATGCTCAAAGAGTTCGAGCAGAAAGAACTCTAGAGTGTAAC
TCAAGATTCAATCTAGTTGTTTCAAGTGGTCATAGTTGTTTGAAGAGCTAG
Protein sequenceShow/hide protein sequence
MSQTGVDDQVDSMSMDEPDSSLPTQSNTSRKLSKKKVRNGDKLVEIVTTSLDNMGVMYEKTTENIGKIAKYFETQTVVSERRTHIFTELVDVEGLTDAQRVRAERTLECN
SRFNLVVSSGHSCLKS