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Lag0018434 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018434
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein
Genome locationchr5:27010158..27010757
RNA-Seq ExpressionLag0018434
SyntenyLag0018434
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1825870.1 unnamed protein product [Ananas comosus var. bracteatus]1.4e-5261.69Show/hide
Query:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF
        KH WTK ED KL+ECLL+L+N  QWR DNGTFR+GYLQQ+E+ M  K+P CE+K  PHIESR KL K+QYNAI EMLGP+ SGFGW+++ KC++C K+V+
Subjt:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF

Query:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS
        D+WVKSHP A GLR KS  Y +E++I+FGKD A G+ AE+P D    I G ET+
Subjt:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS

CAD1831704.1 unnamed protein product [Ananas comosus var. bracteatus]4.7e-5363.16Show/hide
Query:  NSYKKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH WTKEED KL+ECLLEL     W+ DNGTFR+GYLQQ+EK M  +LPGC++K  PHIESR KL K+QYNAI+EMLGP  SGFGWN+ EKCI C 
Subjt:  NSYKKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI
        K VFD WVKSHPTA GLR KS  YL++++++FGKD A G GAE+  D +  +
Subjt:  KDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI

XP_020101014.1 uncharacterized protein LOC109718933 isoform X1 [Ananas comosus]1.4e-5261.69Show/hide
Query:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF
        KH WTK ED KL+ECLL+L+N  QWR DNGTFR+GYLQQ+E+ M  K+P CE+K  PHIESR KL K+QYNAI EMLGP+ SGFGW+++ KC++C K+V+
Subjt:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF

Query:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS
        D+WVKSHP A GLR KS  Y +E++I+FGKD A G+ AE+P D    I G ET+
Subjt:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS

XP_020101017.1 uncharacterized protein LOC109718933 isoform X2 [Ananas comosus]1.4e-5261.69Show/hide
Query:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF
        KH WTK ED KL+ECLL+L+N  QWR DNGTFR+GYLQQ+E+ M  K+P CE+K  PHIESR KL K+QYNAI EMLGP+ SGFGW+++ KC++C K+V+
Subjt:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF

Query:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS
        D+WVKSHP A GLR KS  Y +E++I+FGKD A G+ AE+P D    I G ET+
Subjt:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS

XP_024022021.1 uncharacterized protein LOC112091787 [Morus notabilis]4.7e-5361.78Show/hide
Query:  KKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDV
        +KH WT  ED KLVECLL++AN  +W+ DNGTF+ GYLQQ+EKMM  K+P C +KAQPHI+SRVK+LKKQY+AI+EMLGP  SGFGWN+++KC+   KDV
Subjt:  KKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDV

Query:  FDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERIGIETSHEI
        FD+WVKSHP+AKGLRNK   Y DE+ ++FG D ANG GA    DM + I  ET +++
Subjt:  FDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERIGIETSHEI

TrEMBL top hitse value%identityAlignment
A0A6P5FXE5 uncharacterized protein LOC109718933 isoform X16.7e-5361.69Show/hide
Query:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF
        KH WTK ED KL+ECLL+L+N  QWR DNGTFR+GYLQQ+E+ M  K+P CE+K  PHIESR KL K+QYNAI EMLGP+ SGFGW+++ KC++C K+V+
Subjt:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF

Query:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS
        D+WVKSHP A GLR KS  Y +E++I+FGKD A G+ AE+P D    I G ET+
Subjt:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS

A0A6P5G5H8 uncharacterized protein LOC109718933 isoform X26.7e-5361.69Show/hide
Query:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF
        KH WTK ED KL+ECLL+L+N  QWR DNGTFR+GYLQQ+E+ M  K+P CE+K  PHIESR KL K+QYNAI EMLGP+ SGFGW+++ KC++C K+V+
Subjt:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF

Query:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS
        D+WVKSHP A GLR KS  Y +E++I+FGKD A G+ AE+P D    I G ET+
Subjt:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS

A0A6V7NF77 Myb_DNA-bind_3 domain-containing protein7.4e-5261.18Show/hide
Query:  NSYKKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH WTK+ED KL+ECLLEL     W+ DNGTF++GYLQQ+EK M  +LPGC++K  PHIESR KL K+QYN I+EMLGP  SGFGWN+ EKCI C 
Subjt:  NSYKKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI
        K VFD WVKSHPTA GLR KS  YL++++++FGKD A G GAE+  D +  +
Subjt:  KDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI

A0A6V7P4Z9 Myb_DNA-bind_3 domain-containing protein6.7e-5361.69Show/hide
Query:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF
        KH WTK ED KL+ECLL+L+N  QWR DNGTFR+GYLQQ+E+ M  K+P CE+K  PHIESR KL K+QYNAI EMLGP+ SGFGW+++ KC++C K+V+
Subjt:  KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSKDVF

Query:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS
        D+WVKSHP A GLR KS  Y +E++I+FGKD A G+ AE+P D    I G ET+
Subjt:  DDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI-GIETS

A0A6V7PLJ8 Myb_DNA-bind_3 domain-containing protein2.3e-5363.16Show/hide
Query:  NSYKKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH WTKEED KL+ECLLEL     W+ DNGTFR+GYLQQ+EK M  +LPGC++K  PHIESR KL K+QYNAI+EMLGP  SGFGWN+ EKCI C 
Subjt:  NSYKKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI
        K VFD WVKSHPTA GLR KS  YL++++++FGKD A G GAE+  D +  +
Subjt:  KDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein1.8e-0524.12Show/hide
Query:  EVNDQSRWNSYK---KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFG
        E+N +S   S K   K  WT E D   VE +++       +  N   +  ++  +  +   +  G   K    +  R   L K Y  +  +L  +  GF 
Subjt:  EVNDQSRWNSYK---KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFG

Query:  WNEREKCIDCSKDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERIGIETSHE
        W+E    I     V+D ++K HP A+  R KSL   +++  IF      G      G  ++    + S E
Subjt:  WNEREKCIDCSKDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERIGIETSHE

AT2G24960.2 unknown protein1.8e-0524.12Show/hide
Query:  EVNDQSRWNSYK---KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFG
        E+N +S   S K   K  WT E D   VE +++       +  N   +  ++  +  +   +  G   K    +  R   L K Y  +  +L  +  GF 
Subjt:  EVNDQSRWNSYK---KHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFG

Query:  WNEREKCIDCSKDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERIGIETSHE
        W+E    I     V+D ++K HP A+  R KSL   +++  IF      G      G  ++    + S E
Subjt:  WNEREKCIDCSKDVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERIGIETSHE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCAATGATCAATCTAGATGGAATTCTTACAAGAAACACGTTTGGACTAAAGAAGAGGATGGTAAGTTGGTTGAGTGTCTATTAGAGTTAGCAAATCTTAGCCA
ATGGCGTTGTGATAATGGAACATTTAGATCGGGCTATCTACAACAAGTGGAGAAAATGATGAAGTTAAAGTTGCCTGGATGTGAGGTGAAGGCTCAACCTCACATAGAAT
CAAGAGTGAAACTTTTGAAGAAACAATATAATGCAATTGCAGAGATGTTAGGGCCAAATTGTAGTGGTTTTGGTTGGAATGAAAGAGAGAAGTGTATTGATTGTTCAAAA
GATGTCTTTGATGATTGGGTTAAGAGTCACCCCACAGCAAAAGGATTGCGAAACAAGTCATTAACATACTTAGACGAGATGGCAATAATATTTGGCAAAGATCTAGCTAA
TGGCCTAGGAGCTGAAGCGCCAGGAGATATGTCTGAAAGAATAGGCATAGAGACAAGTCATGAGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCAATGATCAATCTAGATGGAATTCTTACAAGAAACACGTTTGGACTAAAGAAGAGGATGGTAAGTTGGTTGAGTGTCTATTAGAGTTAGCAAATCTTAGCCA
ATGGCGTTGTGATAATGGAACATTTAGATCGGGCTATCTACAACAAGTGGAGAAAATGATGAAGTTAAAGTTGCCTGGATGTGAGGTGAAGGCTCAACCTCACATAGAAT
CAAGAGTGAAACTTTTGAAGAAACAATATAATGCAATTGCAGAGATGTTAGGGCCAAATTGTAGTGGTTTTGGTTGGAATGAAAGAGAGAAGTGTATTGATTGTTCAAAA
GATGTCTTTGATGATTGGGTTAAGAGTCACCCCACAGCAAAAGGATTGCGAAACAAGTCATTAACATACTTAGACGAGATGGCAATAATATTTGGCAAAGATCTAGCTAA
TGGCCTAGGAGCTGAAGCGCCAGGAGATATGTCTGAAAGAATAGGCATAGAGACAAGTCATGAGATCTGA
Protein sequenceShow/hide protein sequence
MEVNDQSRWNSYKKHVWTKEEDGKLVECLLELANLSQWRCDNGTFRSGYLQQVEKMMKLKLPGCEVKAQPHIESRVKLLKKQYNAIAEMLGPNCSGFGWNEREKCIDCSK
DVFDDWVKSHPTAKGLRNKSLTYLDEMAIIFGKDLANGLGAEAPGDMSERIGIETSHEI