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Lag0018449 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018449
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr5:27611195..27611981
RNA-Seq ExpressionLag0018449
SyntenyLag0018449
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887714.1 cilia- and flagella-associated protein 251-like [Benincasa hispida]3.7e-0627.17Show/hide
Query:  VQSFESPKLEICPLLATDEGITMEFFKSFVDGEAVMRRELHTQLSIEHHGHHVADLTFN---------------ESATSIVDVMDERLDE----------
        +++ +  +LEICPLLAT + +TM +F  F++ E  + +E+  ++S       V +L+ N               E    I  +M+ R+DE          
Subjt:  VQSFESPKLEICPLLATDEGITMEFFKSFVDGEAVMRRELHTQLSIEHHGHHVADLTFN---------------ESATSIVDVMDERLDE----------

Query:  --------LVESVNLMMDYMKNRPVTRTNNFVDDITDNYSGVVEFFRELNDLENEHEENDDELNLKDGKDDQLFKFRKDDDDDD
                LVES+  M+DYMK     +++    ++   +    +F +EL+ +E E EE +++  L D  D      RKDDD+D+
Subjt:  --------LVESVNLMMDYMKNRPVTRTNNFVDDITDNYSGVVEFFRELNDLENEHEENDDELNLKDGKDDQLFKFRKDDDDDD

TrEMBL top hitse value%identityAlignment
A0A5A7UD30 Protein Ycf2-like6.4e-0426.59Show/hide
Query:  FESPKLEICPLLATDEGITMEFFKSFVDGEAVMRRELHTQLSIEHHGHHVADLTFNES--ATSIVDVMDERLDE-------LVESVNLMMDYMKNRPVTR
        F+S  LE+ P+LAT + + M FF  F++ E  + +E   +L    +  H+A ++ N+   +TS ++V+ + +++       +  SV  ++D++K   +  
Subjt:  FESPKLEICPLLATDEGITMEFFKSFVDGEAVMRRELHTQLSIEHHGHHVADLTFNES--ATSIVDVMDERLDE-------LVESVNLMMDYMKNRPVTR

Query:  TNNFVDDITDNYSGVVE------------FFRELNDLENEHEEND-DELNLKDGKDDQLFKFRKDDDDDDPLG
         N F +++    +G++E            F   L+ +E + EEND ++LNL D  +  +   R DD+D D  G
Subjt:  TNNFVDDITDNYSGVVE------------FFRELNDLENEHEEND-DELNLKDGKDDQLFKFRKDDDDDDPLG

A0A5D3DCN3 Protein Ycf2-like6.4e-0426.59Show/hide
Query:  FESPKLEICPLLATDEGITMEFFKSFVDGEAVMRRELHTQLSIEHHGHHVADLTFNES--ATSIVDVMDERLDE-------LVESVNLMMDYMKNRPVTR
        F+S  LE+ P+LAT + + M FF  F++ E  + +E   +L    +  H+A ++ N+   +TS ++V+ + +++       +  SV  ++D++K   +  
Subjt:  FESPKLEICPLLATDEGITMEFFKSFVDGEAVMRRELHTQLSIEHHGHHVADLTFNES--ATSIVDVMDERLDE-------LVESVNLMMDYMKNRPVTR

Query:  TNNFVDDITDNYSGVVE------------FFRELNDLENEHEEND-DELNLKDGKDDQLFKFRKDDDDDDPLG
         N F +++    +G++E            F   L+ +E + EEND ++LNL D  +  +   R DD+D D  G
Subjt:  TNNFVDDITDNYSGVVE------------FFRELNDLENEHEEND-DELNLKDGKDDQLFKFRKDDDDDDPLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGACCTGGAGTGCAGAGTTTTGAGTCGCCAAAGTTGGAGATCTGCCCCCTACTAGCAACTGATGAAGGGATAACTATGGAATTTTTCAAGTCATTTGTTGATGG
AGAGGCAGTTATGAGGCGAGAATTGCATACTCAACTGTCTATAGAGCACCATGGACACCATGTAGCTGACTTGACATTTAACGAAAGTGCAACATCGATAGTTGATGTTA
TGGATGAGCGATTAGATGAGCTTGTTGAAAGTGTCAACCTAATGATGGACTACATGAAAAATAGACCAGTGACAAGAACAAACAATTTTGTGGATGACATTACTGACAAT
TATAGTGGAGTGGTCGAATTTTTTCGAGAGCTAAATGACTTGGAGAATGAACATGAGGAGAATGATGATGAACTCAATCTAAAAGATGGTAAGGATGACCAACTGTTCAA
GTTTAGAAAGGATGACGATGACGATGATCCACTAGGGCAAACAACCCAAGAAAATTTGGTAGGGATGTCTGCCATTACATGCATCAAAGATTCAGGAGTTAGTGAAACTA
GAAACGACTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGACCTGGAGTGCAGAGTTTTGAGTCGCCAAAGTTGGAGATCTGCCCCCTACTAGCAACTGATGAAGGGATAACTATGGAATTTTTCAAGTCATTTGTTGATGG
AGAGGCAGTTATGAGGCGAGAATTGCATACTCAACTGTCTATAGAGCACCATGGACACCATGTAGCTGACTTGACATTTAACGAAAGTGCAACATCGATAGTTGATGTTA
TGGATGAGCGATTAGATGAGCTTGTTGAAAGTGTCAACCTAATGATGGACTACATGAAAAATAGACCAGTGACAAGAACAAACAATTTTGTGGATGACATTACTGACAAT
TATAGTGGAGTGGTCGAATTTTTTCGAGAGCTAAATGACTTGGAGAATGAACATGAGGAGAATGATGATGAACTCAATCTAAAAGATGGTAAGGATGACCAACTGTTCAA
GTTTAGAAAGGATGACGATGACGATGATCCACTAGGGCAAACAACCCAAGAAAATTTGGTAGGGATGTCTGCCATTACATGCATCAAAGATTCAGGAGTTAGTGAAACTA
GAAACGACTGTTAG
Protein sequenceShow/hide protein sequence
MEGPGVQSFESPKLEICPLLATDEGITMEFFKSFVDGEAVMRRELHTQLSIEHHGHHVADLTFNESATSIVDVMDERLDELVESVNLMMDYMKNRPVTRTNNFVDDITDN
YSGVVEFFRELNDLENEHEENDDELNLKDGKDDQLFKFRKDDDDDDPLGQTTQENLVGMSAITCIKDSGVSETRNDC