; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018450 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018450
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr5:27705159..27706614
RNA-Seq ExpressionLag0018450
SyntenyLag0018450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.8e-3750Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL
        +AK LRG+Y+KT  FL A LG+ PSY WRSILWGRDLF KGYR ++GNG +I  S DPW+P++G+  P+  H H  N +VA  +   G W+E  V  SF+
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL

Query:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLI
         S+A+ IL  PL     +D +IW +D  G F+VR+AY LG  L+
Subjt:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLI

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]5.4e-2641.06Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL
        +A+VL+ RY+K   F+ A LGS PS+VWRSI+WGR + +KG R RIGNG N+    + WIP+  +  PI   +   + TVA+ I     W E  +   F 
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL

Query:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPE
          DAEAI+ IPL     ED +IW  D KG+++V++ Y++   +    K+PE
Subjt:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPE

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]5.4e-2637.36Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL
        +AK+L+ RY++ + F+ A LGSNPS++WRSILWGR + +KG + RIGNG +I   K+ W+P+  +  PI   +   +  VA+ I+    WNE  +H  F 
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL

Query:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWEWGLTSADYLMTIWKK
        + DAEAI+ I L     +D VIW  D KG ++V++ Y++  +L    K+P   +         +A +L+T+ +K
Subjt:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWEWGLTSADYLMTIWKK

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]6.0e-2535.14Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL
        +++VL+ RY++   FL A  G+N SY+WRSI+WGR +  KG R RIGNG  I    D W+P+  +  PI   +   +  VA  I +   W+E  +   FL
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL

Query:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPEL-----ASHLFWE--WGLTSADYL-MTIWKKEGN
        + D   IL IPL   + ED V+W  D +G ++V++ Y+L      + K+P+      ASH +W   W L   + L + +W+   N
Subjt:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPEL-----ASHLFWE--WGLTSADYL-MTIWKKEGN

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]1.2e-2535.37Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL
        +A+VL+ RY+ T  FL A  G+ PS  W+SI+WG++L  KG R RIG+G ++     PWIP   +  P+L  +   +  VA FI+    W+   +   F 
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL

Query:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWE--WGL
          D + IL+IPL+ F CED+++W     GF+ V++ Y+L + +   Q      +  +W+  WGL
Subjt:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWE--WGL

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224238.7e-3850Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL
        +AK LRG+Y+KT  FL A LG+ PSY WRSILWGRDLF KGYR ++GNG +I  S DPW+P++G+  P+  H H  N +VA  +   G W+E  V  SF+
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL

Query:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLI
         S+A+ IL  PL     +D +IW +D  G F+VR+AY LG  L+
Subjt:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLI

A0A803P9P5 Uncharacterized protein1.3e-2536.08Show/hide
Query:  KVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFLES
        K+L+ RY+K   FL A +GS PS  WRSI+WG++L  KG R ++GNG  I  + DPW+P   S  P++    + +  V++ I++   WN + +   FLES
Subjt:  KVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFLES

Query:  DAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWEW
        D   I +IPL      D +IW+ +  G ++V++ Y L T L  +++ P  +S+   +W
Subjt:  DAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWEW

A0A803PI64 Uncharacterized protein9.9e-2628.22Show/hide
Query:  AKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFLE
        ++VL+  Y+  + FL A  G+N S+VWRS++WG+ L  KGYR R+GNG ++   +DPW+P+  +       T   N  V     + G W+E+F+ + F  
Subjt:  AKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFLE

Query:  SDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQ------------------KYPELASHLFWEWGLTSADYLMTIWKKEGNDSI---
         DAE IL IP +    ED ++      G + V++ YR+ +SLI +                   K P  AS  +W   + S  Y     K  G D++   
Subjt:  SDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQ------------------KYPELASHLFWEWGLTSADYLMTIWKKEGNDSI---

Query:  -------DNQRVATSLILCWQIWTHRNMVTQNNYKVDMLMLEANIQHYLAEFLHQKNLESDSEAYAVCEALRYLPTDSPHFQLELDA
               + +++   L++ W +W  RN V   +Y      +      YL EF  +    S+S   A+ E  R++P+      + +DA
Subjt:  -------DNQRVATSLILCWQIWTHRNMVTQNNYKVDMLMLEANIQHYLAEFLHQKNLESDSEAYAVCEALRYLPTDSPHFQLELDA

A0A803PJK4 Uncharacterized protein2.0e-2635.39Show/hide
Query:  AKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFLE
        +++L+ RY+K   FL A LGS PS  WR I+WG++L   G R ++GNG+ I+ + DPW+P   S  P+L      N TV++ I     W+   + ++FL+
Subjt:  AKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFLE

Query:  SDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHL------FWEWGLTSADYLMTIWK
         D + IL+IPL+ F  +D +IW  +  G + V++ Y L  S  A Q+ P ++SH       FW+  + S   +  +WK
Subjt:  SDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHL------FWEWGLTSADYLMTIWK

A0A803Q6Z2 Uncharacterized protein5.8e-2635.37Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL
        +A+VL+ RY+ T  FL A  G+ PS  W+SI+WG++L  KG R RIG+G ++     PWIP   +  P+L  +   +  VA FI+    W+   +   F 
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFL

Query:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWE--WGL
          D + IL+IPL+ F CED+++W     GF+ V++ Y+L + +   Q      +  +W+  WGL
Subjt:  ESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWE--WGL

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.4e-0837.68Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPI
        ++++LR RY+     +   +G+ PSY WRSI+ GR+L ++G  R IG+GI+ +   D WI  E    P+
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.1e-1225.77Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIH--------THAHNCTVAQFISSLG-VWN
        MAKV + RY+     L APLGS PS+VW+SI   +++  +G R  +GNG +I   +  W+  + +   + +         + +    V+  I   G  W 
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIH--------THAHNCTVAQFISSLG-VWN

Query:  ETFVHNSFLESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELAS
        +  +   F E + + I  +     +  D   WD    G + V++ Y + T +I ++  P+  S
Subjt:  ETFVHNSFLESDAEAILNIPLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELAS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.9e-1037.68Show/hide
Query:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPI
        ++++LR RY+     +   +G+ PSY WRSI+ GR+L ++G  R IG+GI+ +   D WI  E    P+
Subjt:  MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAGTTCTTCGTGGGCGATACTATAAAACGAGACAGTTTCTGATGGCCCCTTTAGGTTCTAATCCTTCGTATGTATGGAGAAGTATCCTTTGGGGTCGAGATTT
GTTCAATAAAGGTTATCGCCGGAGAATCGGTAATGGGATTAACATTGAGGCATCTAAGGATCCTTGGATTCCTAAGGAAGGATCCTGTATTCCTATCTTGATTCATACTC
ATGCTCACAATTGCACAGTAGCACAGTTCATATCATCCCTAGGAGTTTGGAATGAGACCTTTGTTCACAATTCTTTTTTGGAATCCGATGCTGAGGCCATTCTAAATATC
CCGTTAAACCCGTTCCAATGTGAAGATATGGTGATATGGGATCTTGATCCAAAGGGCTTCTTTAATGTTCGAACTGCCTATAGATTGGGAACTAGTCTCATTGCCCAACA
GAAATATCCAGAATTAGCATCCCACTTATTTTGGGAGTGGGGCCTCACTTCGGCGGATTACTTGATGACAATCTGGAAGAAGGAGGGGAATGATTCCATCGACAATCAAA
GAGTAGCAACAAGCCTAATTTTATGCTGGCAGATCTGGACTCACAGAAACATGGTGACTCAAAACAACTACAAAGTGGATATGCTGATGCTTGAGGCCAACATTCAACAC
TATCTTGCAGAATTTCTACATCAAAAGAATTTAGAGTCTGATTCAGAGGCATATGCAGTCTGTGAAGCCCTGCGATATCTTCCGACTGATTCCCCCCATTTCCAGCTGGA
ATTAGATGCTCTTCAGGTGGTGCAGCTGCTGTCCAACGAGATGATGGATGACACTGAGTTAGGGGGCTTCATAATGGAAGCTAAAACCCTAATGAGTTCCTTTAAAGTTG
ACTCCATTAGCCATACACCAAGGCTTCTGGGCTGGCCCATCATATGGCTCATATGGCAACTAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAGTTCTTCGTGGGCGATACTATAAAACGAGACAGTTTCTGATGGCCCCTTTAGGTTCTAATCCTTCGTATGTATGGAGAAGTATCCTTTGGGGTCGAGATTT
GTTCAATAAAGGTTATCGCCGGAGAATCGGTAATGGGATTAACATTGAGGCATCTAAGGATCCTTGGATTCCTAAGGAAGGATCCTGTATTCCTATCTTGATTCATACTC
ATGCTCACAATTGCACAGTAGCACAGTTCATATCATCCCTAGGAGTTTGGAATGAGACCTTTGTTCACAATTCTTTTTTGGAATCCGATGCTGAGGCCATTCTAAATATC
CCGTTAAACCCGTTCCAATGTGAAGATATGGTGATATGGGATCTTGATCCAAAGGGCTTCTTTAATGTTCGAACTGCCTATAGATTGGGAACTAGTCTCATTGCCCAACA
GAAATATCCAGAATTAGCATCCCACTTATTTTGGGAGTGGGGCCTCACTTCGGCGGATTACTTGATGACAATCTGGAAGAAGGAGGGGAATGATTCCATCGACAATCAAA
GAGTAGCAACAAGCCTAATTTTATGCTGGCAGATCTGGACTCACAGAAACATGGTGACTCAAAACAACTACAAAGTGGATATGCTGATGCTTGAGGCCAACATTCAACAC
TATCTTGCAGAATTTCTACATCAAAAGAATTTAGAGTCTGATTCAGAGGCATATGCAGTCTGTGAAGCCCTGCGATATCTTCCGACTGATTCCCCCCATTTCCAGCTGGA
ATTAGATGCTCTTCAGGTGGTGCAGCTGCTGTCCAACGAGATGATGGATGACACTGAGTTAGGGGGCTTCATAATGGAAGCTAAAACCCTAATGAGTTCCTTTAAAGTTG
ACTCCATTAGCCATACACCAAGGCTTCTGGGCTGGCCCATCATATGGCTCATATGGCAACTAAACTAA
Protein sequenceShow/hide protein sequence
MAKVLRGRYYKTRQFLMAPLGSNPSYVWRSILWGRDLFNKGYRRRIGNGINIEASKDPWIPKEGSCIPILIHTHAHNCTVAQFISSLGVWNETFVHNSFLESDAEAILNI
PLNPFQCEDMVIWDLDPKGFFNVRTAYRLGTSLIAQQKYPELASHLFWEWGLTSADYLMTIWKKEGNDSIDNQRVATSLILCWQIWTHRNMVTQNNYKVDMLMLEANIQH
YLAEFLHQKNLESDSEAYAVCEALRYLPTDSPHFQLELDALQVVQLLSNEMMDDTELGGFIMEAKTLMSSFKVDSISHTPRLLGWPIIWLIWQLN