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Lag0018454 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018454
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr5:27763169..27763495
RNA-Seq ExpressionLag0018454
SyntenyLag0018454
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024964786.1 uncharacterized protein LOC112505062, partial [Cynara cardunculus var. scolymus]2.1e-0636.11Show/hide
Query:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASDQEEIRPLQPSLINPP
        MR+ DQ+ TFNV  ++++P YLE CS + E+D +     +E +K K     +    E + + +ED+   + S AA  E L    D  E++   PS+I+PP
Subjt:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASDQEEIRPLQPSLINPP

Query:  ELDLKPLP
        +L+LK LP
Subjt:  ELDLKPLP

XP_024969651.1 uncharacterized protein LOC112509014 [Cynara cardunculus var. scolymus]8.1e-0636.19Show/hide
Query:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASDQEEIRPLQPSLINPP
        MR+ DQ+ TFNV  +++YP YLE CS + E++    ++  E    K     + +  E   E IED+   I S AA  E L    D  E++   PS+I+PP
Subjt:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASDQEEIRPLQPSLINPP

Query:  ELDLK
        +++LK
Subjt:  ELDLK

XP_024974800.1 uncharacterized protein LOC112512904 [Cynara cardunculus var. scolymus]6.2e-0636.94Show/hide
Query:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEG---IEDIPVTIDSAAARIEALRDASDQEEIRPLQPSLI
        MR+ DQ+ TFNV  +++YP YLE CS    V EI     +E ++       K K+E+   +G    ED+   + S AA  E L    D  E++   P +I
Subjt:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEG---IEDIPVTIDSAAARIEALRDASDQEEIRPLQPSLI

Query:  NPPELDLKPLP
        +PP+L+LK LP
Subjt:  NPPELDLKPLP

XP_024980870.1 uncharacterized protein LOC112517718 [Cynara cardunculus var. scolymus]1.8e-0536.04Show/hide
Query:  RVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSI-LQETLKGKPLGGNKFKKEEPEVEGIEDI---PVTIDSAAARIEALRDASDQEEIRPLQPSLI
        R+ DQ+ TFNV  +++YP YLE CS I E++E+ +   +Q+ LK +  G    + EE  VE IE++    V +D+A   +       +  E +   PS+ 
Subjt:  RVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSI-LQETLKGKPLGGNKFKKEEPEVEGIEDI---PVTIDSAAARIEALRDASDQEEIRPLQPSLI

Query:  NPPELDLKPLP
        +PP+L+LK LP
Subjt:  NPPELDLKPLP

XP_030477929.1 uncharacterized protein LOC115694963 [Cannabis sativa]1.4e-0534.45Show/hide
Query:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASD-----------QEEI
        MRVNDQ+ TFNV  AM++P  +E CS I  +D    SI+ E    +     KF     E   +ED+    D+  A +E L+   +           +   
Subjt:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASD-----------QEEI

Query:  RPLQPSLINPPELDLKPLP
        +P +PS+  PP+L+LKPLP
Subjt:  RPLQPSLINPPELDLKPLP

TrEMBL top hitse value%identityAlignment
A0A1S3YJE3 uncharacterized protein LOC1077766772.8e-0434.21Show/hide
Query:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKP-LGGNKFKKEEPEVEGIEDIPVTIDSAA-----ARIEALRDASDQEEIRPLQP
        MR+ND++ TFNV K+M+ P     CS+IE VD I +    ETL  K  L       +E   E + +  + ++         + E L    ++ +I P +P
Subjt:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKP-LGGNKFKKEEPEVEGIEDIPVTIDSAA-----ARIEALRDASDQEEIRPLQP

Query:  SLINPPELDLKPLP
        S+  PP+L+LKPLP
Subjt:  SLINPPELDLKPLP

A0A1S3ZA56 uncharacterized protein LOC1077844781.6e-0433.63Show/hide
Query:  RVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSI---LQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDAS-DQEEIR--PLQPS
        RVND++ TF V K M+ P   E   +I+ VD++  ++   ++E   G+ L       +  ++EG  +    +D   +   AL   S D E I   P +PS
Subjt:  RVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSI---LQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDAS-DQEEIR--PLQPS

Query:  LINPPELDLKPLP
        +I PP+L+LKPLP
Subjt:  LINPPELDLKPLP

A0A1S3ZD91 uncharacterized protein LOC1077855654.8e-0431.86Show/hide
Query:  RVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSI---LQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDAS---DQEEIRPLQPS
        RVND++ TF V K+M++P   E  S+I+ V+E+   I   + E   G+ L       +  ++EG      +++       A +  S   D     P +PS
Subjt:  RVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSI---LQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDAS---DQEEIRPLQPS

Query:  LINPPELDLKPLP
        +I PP+L+LKPLP
Subjt:  LINPPELDLKPLP

A0A1S4D3Q3 uncharacterized protein LOC1078256743.7e-0431.53Show/hide
Query:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAA---RIEALRDASDQEEIRPLQPSLI
        MR+ND++  FNV K+M+ P     CS+I+ VD I  S  +      PL       EE   E + +  + ++   +    +E      ++ E  P +PS+ 
Subjt:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAA---RIEALRDASDQEEIRPLQPSLI

Query:  NPPELDLKPLP
         PP+L+LKPLP
Subjt:  NPPELDLKPLP

A0A2G9GK35 Reverse transcriptase4.8e-0436.28Show/hide
Query:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEI--SVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASDQEEIRP---LQPS
        MRV DQQ TFNV KAM++P   + C  +   D +  + SI +++L   PL        + E E   ++  T+D  A++    R     E I P   L+PS
Subjt:  MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEI--SVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASDQEEIRP---LQPS

Query:  LINPPELDLKPLP
        +  PP L+LKPLP
Subjt:  LINPPELDLKPLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGTCAATGATCAACAAGACACATTTAATGTGATGAAGGCAATGCAATACCCGGGATACCTTGAGAGATGCTCCATGATTGAAGAAGTTGATGAAATTTCTGTATC
TATTTTGCAGGAGACATTAAAAGGGAAACCGCTAGGAGGGAACAAGTTCAAAAAGGAAGAGCCAGAAGTGGAAGGAATTGAAGACATCCCAGTCACAATTGATTCTGCAG
CAGCAAGAATAGAAGCATTAAGGGATGCATCAGATCAAGAAGAGATCAGGCCGTTACAACCGTCTCTGATCAATCCCCCTGAACTGGATCTTAAACCTCTGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGTCAATGATCAACAAGACACATTTAATGTGATGAAGGCAATGCAATACCCGGGATACCTTGAGAGATGCTCCATGATTGAAGAAGTTGATGAAATTTCTGTATC
TATTTTGCAGGAGACATTAAAAGGGAAACCGCTAGGAGGGAACAAGTTCAAAAAGGAAGAGCCAGAAGTGGAAGGAATTGAAGACATCCCAGTCACAATTGATTCTGCAG
CAGCAAGAATAGAAGCATTAAGGGATGCATCAGATCAAGAAGAGATCAGGCCGTTACAACCGTCTCTGATCAATCCCCCTGAACTGGATCTTAAACCTCTGCCATAG
Protein sequenceShow/hide protein sequence
MRVNDQQDTFNVMKAMQYPGYLERCSMIEEVDEISVSILQETLKGKPLGGNKFKKEEPEVEGIEDIPVTIDSAAARIEALRDASDQEEIRPLQPSLINPPELDLKPLP