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Lag0018456 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018456
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDynein light chain
Genome locationchr5:27797610..27798896
RNA-Seq ExpressionLag0018456
SyntenyLag0018456
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462164.1 PREDICTED: dynein light chain LC6, flagellar outer arm-like [Cucumis melo]5.8e-1491.49Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK LVQD DMP K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

XP_011659570.1 dynein light chain LC6, flagellar outer arm [Cucumis sativus]5.8e-1491.49Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK LVQD DMP K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

XP_022964212.1 dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]2.2e-1389.36Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK  VQD DMP+K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

XP_022964213.1 dynein light chain LC6, flagellar outer arm-like isoform X2 [Cucurbita moschata]2.2e-1389.36Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK  VQD DMP+K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

XP_038897874.1 dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]7.6e-1489.36Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK L+QD DMP K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

TrEMBL top hitse value%identityAlignment
A0A0A0K947 Dynein light chain2.8e-1491.49Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK LVQD DMP K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

A0A1S3CGU5 Dynein light chain2.8e-1491.49Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK LVQD DMP K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

A0A5A7UW48 Dynein light chain2.8e-1491.49Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK LVQD DMP K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

A0A6J1HK61 Dynein light chain1.1e-1389.36Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK  VQD DMP+K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

A0A6J1KDK4 Dynein light chain1.1e-1389.36Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK  VQD DMP+K+QIQAMDAASKALDLYDVFDCKSIAAHIKKD
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 111.1e-1372.34Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK +V+D DMP K+Q+QAM  AS+ALDL+DVFDCKSIA HIKK+
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.1e-1372.34Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK +V+D DMP K+Q+QAM  AS+ALDL+DVFDCKSIA HIKK+
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

AT3G16120.1 Dynein light chain type 1 family protein6.4e-1165.96Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK  V++ DMP K+Q+QAM  AS++LDL+DVFD  SIAAHIKK+
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD

AT4G19640.1 Ras-related small GTP-binding family protein7.6e-0466.67Show/hide
Query:  IDCAQVLLGDVDVGKSSPVIRFVEGQFVEF
        I+   VLLGDV  GKSS V+RFV+ QFVEF
Subjt:  IDCAQVLLGDVDVGKSSPVIRFVEGQFVEF

AT4G27360.1 Dynein light chain type 1 family protein3.4e-0446.81Show/hide
Query:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD
        MLEGK ++ D DM   ++  A+  ASKALD +DV +   IA  IKK+
Subjt:  MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGCAAAACTTTGGTACAGGACAAAGATATGCCTGCCAAGATACAGATCCAAGCCATGGACGCTGCTTCTAAAGCTCTAGATCTCTATGATGTTTTCGACTG
CAAATCCATCGCTGCCCACATAAAAAAAGATCTAATTGATTGTGCTCAGGTGCTTCTTGGTGACGTTGATGTTGGGAAGTCAAGTCCAGTGATACGTTTTGTTGAAGGGC
AATTTGTAGAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGGCAAAACTTTGGTACAGGACAAAGATATGCCTGCCAAGATACAGATCCAAGCCATGGACGCTGCTTCTAAAGCTCTAGATCTCTATGATGTTTTCGACTG
CAAATCCATCGCTGCCCACATAAAAAAAGATCTAATTGATTGTGCTCAGGTGCTTCTTGGTGACGTTGATGTTGGGAAGTCAAGTCCAGTGATACGTTTTGTTGAAGGGC
AATTTGTAGAGTTTTAA
Protein sequenceShow/hide protein sequence
MLEGKTLVQDKDMPAKIQIQAMDAASKALDLYDVFDCKSIAAHIKKDLIDCAQVLLGDVDVGKSSPVIRFVEGQFVEF