; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0018462 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018462
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor bHLH112-like isoform X1
Genome locationchr5:27819250..27827315
RNA-Seq ExpressionLag0018462
SyntenyLag0018462
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594644.1 Transcription factor basic helix-loop-helix 112, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2878.82Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSD-NDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA++SD N++NNNSM+FQDYSTFQMMGFALSSSTTS+HWNQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSD-NDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

KAG7026613.1 Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]5.8e-2878.82Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSD-NDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA++SD N++NNNSM+FQDYSTFQMMGFALSSSTTS+HWNQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSD-NDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

XP_023002945.1 transcription factor bHLH112-like isoform X1 [Cucurbita maxima]3.7e-2778.57Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA  +D+D NNNSM+FQDYSTFQMMGFALSSSTTS+HWNQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

XP_023002946.1 transcription factor bHLH112-like isoform X2 [Cucurbita maxima]3.7e-2778.57Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA  +D+D NNNSM+FQDYSTFQMMGFALSSSTTS+HWNQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

XP_023002947.1 transcription factor bHLH112-like isoform X3 [Cucurbita maxima]3.7e-2778.57Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA  +D+D NNNSM+FQDYSTFQMMGFALSSSTTS+HWNQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

TrEMBL top hitse value%identityAlignment
A0A6J1EFU9 transcription factor bHLH112-like isoform X19.0e-2777.65Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSD-NDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA++SD N++NNNSM+FQDYSTFQMMGFALSSSTTS+H NQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSD-NDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

A0A6J1EJQ8 transcription factor bHLH112-like isoform X29.0e-2777.65Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSD-NDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA++SD N++NNNSM+FQDYSTFQMMGFALSSSTTS+H NQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSD-NDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

A0A6J1KL13 transcription factor bHLH112-like isoform X31.8e-2778.57Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA  +D+D NNNSM+FQDYSTFQMMGFALSSSTTS+HWNQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

A0A6J1KMR1 transcription factor bHLH112-like isoform X21.8e-2778.57Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA  +D+D NNNSM+FQDYSTFQMMGFALSSSTTS+HWNQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

A0A6J1KQE4 transcription factor bHLH112-like isoform X11.8e-2778.57Show/hide
Query:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE
        M+V V G SPCSVGI DL WP ADD+LDIKPKSA  +D+D NNNSM+FQDYSTFQMMGFALSSSTTS+HWNQ D LLCGGGR E
Subjt:  MLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNNSMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAGGTAGAATCGGGCAAATCTGCACATAAGCCTAGACGTCTGCGAGCAAGTAGTACAGAGCTGCTGGTCAGCCTCATGCCAAGGCCGAGGCCGACCATCCCCCT
TCGAAAAGGCCAGGTGATTTTGGACCACACAGATGGACGAGGAGCTGACGAGGACAATCGGGCAGAGGTAGGATCAAAGACCGACCCAGAGGAAGACCGGACCAAAGGGT
CGGGCCAAAATGGCCCGACCCATATGGTCGGCCTCGGCGGCCGAGGCCGACCATTCGGCCCGTTTGCACGGGCCGAGCCCGGTACCTCTCTTCGGTCCCTAATGCCCCGA
ATCGCCCCGGTTTCGCCTGGTTCGCCCCGAAACGCCACCGAATTCCTGAAAAACCCTAGGAGGACAAACAGGCATCGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCA
GCGGTTTTTGCTGGTCTTGCAGGGCATAAAACCCAACAATATGGACTCCCACCTTCATTTGGTTATGGTCGGCTTCGAACTTCGGATGATCAGCTTTAGCCTTCAGAGGG
GATTACTCTCTTCCCAAGGGTGCGTACACTCTGTCGAGGACCTGGGAAGATTGAGGACATGCGTCAACCTCTCTGCAGGGATTAGTCTCTTCTCGAAGGAATTGATTTCA
TCCCAAGGGTGTGTACACTCTGTTGGGGACTTGAAATCTCATCTCGAGGGTGTGTACACTCAGTCGAGGTCTTGGAATCTCATCTCGAGGGTGTGTACACTCAGTCGAGG
TCTTGGAATCTCATCTCGAGGGTACGTACACTCTATCGAGGTCTTGGAATTTCATCTCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATTTCATCTCGAGGGTGCGTA
CACTCAGTCGAGGTCTTGGAATTTCATCTCGAGGGTGCGTACACCTTGTCGAGATCTTGAAATTTCATCTCGAAGGTGTGTACACTCAGTCGAGGTCTTGGAATTCATCT
CGATGCGTTTTCATGTCGCATAACTCTTCCTTATTGGCATTTTTGGGTGTCGGCCTCCTACGAGTCAGCCTCAGCTCATTGCATGTCGACTCTGTCATTGTCATTGAGAC
CTTCAACATCATCATTCTCGAGCGTTTGTCGACTCTGCTAAGGCGGCTATTTGAGGCGATAATCGGTGGAGCTCTTCAAGGAGCATGCATGTTGGTTGCCGTCGATGGTT
TTTCGCCTTGTTCTGTCGGCATCCACGACTTACGCTGGCCGCTAGCTGATGATTATCTCGACATCAAGCCCAAGTCCGCCTCTAATTCCGACAACGACGACAACAACAAC
TCCATGGTGTTTCAAGACTATTCCACCTTCCAAATGATGGGTTTTGCTCTTTCTTCTTCCACCACCTCCAATCATTGGAATCAATCTGATGATTTGCTTTGTGGCGGTGG
ACGAGAGGAACATGGGAGACCGAGACACATACAAACTATTGATGAAGGTCCATTACAAGTGTCGAAATCAAATTTCATTGATGAAGAGGACCAGAAACCGACCCAGAGGA
AGATCGGACCAAAGTGGCCCAACCCATATGGTCGGCATCGGCAAAAGGTCGAGGCCGAGCTCGGTCACCTTCTTTCGGTCCCTAATGCCCCGGATCGCCCCGGTTTCACC
TGGTTCGTCCCGAAACACCTCCGAATTCCTAAATACCCTAGGAGGACAAACAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTGCAGGGATTTTTGTTGGTCTT
GCAGGTCACGTCTTCCCCAGCTTCTACAAATTCACTATTGGTGTCACGTGAAGGTCAGGTGAGTCTTCTGTCCGGATTTTGGTATCAACAGTTGGCGCCGTCTGTGGGAA
AGGGTCTTGCCAGTTCAGACCGCGCGTCGGTGGTGGTCTGCAGGATGGATCGAGTTCAGAAACCAGAAGGAAACCTCGGGTATGAGCAGAAAACGTCGAACCAGACTAGG
GCCGACCTTGGTAGGGAAGAGGCCGACCCTAACTTCAGAGACTGTTGTAAGGATCCGTGTGTCCACGATGTTGTTGGACCTGACCCAGAGGACTACCAGCGGAAGAACTG
GAGTCTGTGCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAGGTAGAATCGGGCAAATCTGCACATAAGCCTAGACGTCTGCGAGCAAGTAGTACAGAGCTGCTGGTCAGCCTCATGCCAAGGCCGAGGCCGACCATCCCCCT
TCGAAAAGGCCAGGTGATTTTGGACCACACAGATGGACGAGGAGCTGACGAGGACAATCGGGCAGAGGTAGGATCAAAGACCGACCCAGAGGAAGACCGGACCAAAGGGT
CGGGCCAAAATGGCCCGACCCATATGGTCGGCCTCGGCGGCCGAGGCCGACCATTCGGCCCGTTTGCACGGGCCGAGCCCGGTACCTCTCTTCGGTCCCTAATGCCCCGA
ATCGCCCCGGTTTCGCCTGGTTCGCCCCGAAACGCCACCGAATTCCTGAAAAACCCTAGGAGGACAAACAGGCATCGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCA
GCGGTTTTTGCTGGTCTTGCAGGGCATAAAACCCAACAATATGGACTCCCACCTTCATTTGGTTATGGTCGGCTTCGAACTTCGGATGATCAGCTTTAGCCTTCAGAGGG
GATTACTCTCTTCCCAAGGGTGCGTACACTCTGTCGAGGACCTGGGAAGATTGAGGACATGCGTCAACCTCTCTGCAGGGATTAGTCTCTTCTCGAAGGAATTGATTTCA
TCCCAAGGGTGTGTACACTCTGTTGGGGACTTGAAATCTCATCTCGAGGGTGTGTACACTCAGTCGAGGTCTTGGAATCTCATCTCGAGGGTGTGTACACTCAGTCGAGG
TCTTGGAATCTCATCTCGAGGGTACGTACACTCTATCGAGGTCTTGGAATTTCATCTCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATTTCATCTCGAGGGTGCGTA
CACTCAGTCGAGGTCTTGGAATTTCATCTCGAGGGTGCGTACACCTTGTCGAGATCTTGAAATTTCATCTCGAAGGTGTGTACACTCAGTCGAGGTCTTGGAATTCATCT
CGATGCGTTTTCATGTCGCATAACTCTTCCTTATTGGCATTTTTGGGTGTCGGCCTCCTACGAGTCAGCCTCAGCTCATTGCATGTCGACTCTGTCATTGTCATTGAGAC
CTTCAACATCATCATTCTCGAGCGTTTGTCGACTCTGCTAAGGCGGCTATTTGAGGCGATAATCGGTGGAGCTCTTCAAGGAGCATGCATGTTGGTTGCCGTCGATGGTT
TTTCGCCTTGTTCTGTCGGCATCCACGACTTACGCTGGCCGCTAGCTGATGATTATCTCGACATCAAGCCCAAGTCCGCCTCTAATTCCGACAACGACGACAACAACAAC
TCCATGGTGTTTCAAGACTATTCCACCTTCCAAATGATGGGTTTTGCTCTTTCTTCTTCCACCACCTCCAATCATTGGAATCAATCTGATGATTTGCTTTGTGGCGGTGG
ACGAGAGGAACATGGGAGACCGAGACACATACAAACTATTGATGAAGGTCCATTACAAGTGTCGAAATCAAATTTCATTGATGAAGAGGACCAGAAACCGACCCAGAGGA
AGATCGGACCAAAGTGGCCCAACCCATATGGTCGGCATCGGCAAAAGGTCGAGGCCGAGCTCGGTCACCTTCTTTCGGTCCCTAATGCCCCGGATCGCCCCGGTTTCACC
TGGTTCGTCCCGAAACACCTCCGAATTCCTAAATACCCTAGGAGGACAAACAGGCATCGGAGGCGGTGTGGCCTACACCACACCGGTGTGCAGGGATTTTTGTTGGTCTT
GCAGGTCACGTCTTCCCCAGCTTCTACAAATTCACTATTGGTGTCACGTGAAGGTCAGGTGAGTCTTCTGTCCGGATTTTGGTATCAACAGTTGGCGCCGTCTGTGGGAA
AGGGTCTTGCCAGTTCAGACCGCGCGTCGGTGGTGGTCTGCAGGATGGATCGAGTTCAGAAACCAGAAGGAAACCTCGGGTATGAGCAGAAAACGTCGAACCAGACTAGG
GCCGACCTTGGTAGGGAAGAGGCCGACCCTAACTTCAGAGACTGTTGTAAGGATCCGTGTGTCCACGATGTTGTTGGACCTGACCCAGAGGACTACCAGCGGAAGAACTG
GAGTCTGTGCCACTAA
Protein sequenceShow/hide protein sequence
MLKVESGKSAHKPRRLRASSTELLVSLMPRPRPTIPLRKGQVILDHTDGRGADEDNRAEVGSKTDPEEDRTKGSGQNGPTHMVGLGGRGRPFGPFARAEPGTSLRSLMPR
IAPVSPGSPRNATEFLKNPRRTNRHRRRCGLHHAGVQRFLLVLQGIKPNNMDSHLHLVMVGFELRMISFSLQRGLLSSQGCVHSVEDLGRLRTCVNLSAGISLFSKELIS
SQGCVHSVGDLKSHLEGVYTQSRSWNLISRVCTLSRGLGISSRGYVHSIEVLEFHLEGAYTQSRSWNFISRVRTLSRGLGISSRGCVHLVEILKFHLEGVYTQSRSWNSS
RCVFMSHNSSLLAFLGVGLLRVSLSSLHVDSVIVIETFNIIILERLSTLLRRLFEAIIGGALQGACMLVAVDGFSPCSVGIHDLRWPLADDYLDIKPKSASNSDNDDNNN
SMVFQDYSTFQMMGFALSSSTTSNHWNQSDDLLCGGGREEHGRPRHIQTIDEGPLQVSKSNFIDEEDQKPTQRKIGPKWPNPYGRHRQKVEAELGHLLSVPNAPDRPGFT
WFVPKHLRIPKYPRRTNRHRRRCGLHHTGVQGFLLVLQVTSSPASTNSLLVSREGQVSLLSGFWYQQLAPSVGKGLASSDRASVVVCRMDRVQKPEGNLGYEQKTSNQTR
ADLGREEADPNFRDCCKDPCVHDVVGPDPEDYQRKNWSLCH