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Lag0018477 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0018477
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationchr5:27998253..27998863
RNA-Seq ExpressionLag0018477
SyntenyLag0018477
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A2N9GYG5 Uncharacterized protein9.8e-0433.7Show/hide
Query:  YIGGSQAVIRGIDYDRVSLIELRMMLTDLNVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMTNFFLEWRPSAQQNPVQNQVELDDFVEVEV
        Y+GG +  ++  D D+ S+ EL     +L+V NV +FYY  PG  L+ G   L TD D    T  FLE+   A +N +   VE ++   +++
Subjt:  YIGGSQAVIRGIDYDRVSLIELRMMLTDLNVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMTNFFLEWRPSAQQNPVQNQVELDDFVEVEV

A0A2N9H3P9 DBD_Tnp_Mut domain-containing protein9.8e-0433.7Show/hide
Query:  YIGGSQAVIRGIDYDRVSLIELRMMLTDLNVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMTNFFLEWRPSAQQNPVQNQVELDDFVEVEV
        Y+GG +  ++  D D+ S+ EL     +L+V NV +FYY  PG  L+ G   L TD D    T  FLE+   A +N +   VE ++   +++
Subjt:  YIGGSQAVIRGIDYDRVSLIELRMMLTDLNVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMTNFFLEWRPSAQQNPVQNQVELDDFVEVEV

A0A2N9HT52 SWIM-type domain-containing protein7.5e-0430.48Show/hide
Query:  YIGGSQAVIRGIDYDRVSLIELRMMLTDLNVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMTNFFLEWRPSAQ---QNPVQNQVELDDFVEVEVSGESS
        YIGG+  V   ++ D  S+ E+  M  +L V+N  +FYYV PG  LS G + L TD+ +++M+       P      ++   N + +D    + +   S 
Subjt:  YIGGSQAVIRGIDYDRVSLIELRMMLTDLNVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMTNFFLEWRPSAQ---QNPVQNQVELDDFVEVEVSGESS

Query:  LSDSD
         SD D
Subjt:  LSDSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTCCTCCCTAGTCTTAACTACATTGGTGGAAGCCAAGCCGTTATTCGAGGGATAGATTATGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTAACTGATCT
TAATGTATTCAACGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTATCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGACCAATTTTT
TTTTGGAGTGGCGACCTAGTGCTCAACAAAACCCTGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGAT
TGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATAATATCAATGTCAATGTGGCTGAAGATGATGTAGATTCAGATATTGGGTCATATTCGAATCTCCA
TACACCTATAGGGTCTGACGAAGAAGAAGATGTTAGGGGTCCTAAATATAGGGCTGAGACGGATATGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTATTCCTCCCTAGTCTTAACTACATTGGTGGAAGCCAAGCCGTTATTCGAGGGATAGATTATGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTAACTGATCT
TAATGTATTCAACGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTATCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGACCAATTTTT
TTTTGGAGTGGCGACCTAGTGCTCAACAAAACCCTGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGAT
TGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATAATATCAATGTCAATGTGGCTGAAGATGATGTAGATTCAGATATTGGGTCATATTCGAATCTCCA
TACACCTATAGGGTCTGACGAAGAAGAAGATGTTAGGGGTCCTAAATATAGGGCTGAGACGGATATGAACTAG
Protein sequenceShow/hide protein sequence
MVFLPSLNYIGGSQAVIRGIDYDRVSLIELRMMLTDLNVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMTNFFLEWRPSAQQNPVQNQVELDDFVEVEVSGESSLSDSD
CASSSLSRESIASLNNINVNVAEDDVDSDIGSYSNLHTPIGSDEEEDVRGPKYRAETDMN